BLASTX nr result

ID: Coptis24_contig00020971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020971
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306624.1| predicted protein [Populus trichocarpa] gi|2...   395   e-111
emb|CBI19045.3| unnamed protein product [Vitis vinifera]              405   e-111
ref|XP_002284432.1| PREDICTED: uncharacterized protein LOC100245...   405   e-111
ref|XP_002513784.1| conserved hypothetical protein [Ricinus comm...   386   e-110
ref|XP_002302247.1| predicted protein [Populus trichocarpa] gi|2...   384   e-107

>ref|XP_002306624.1| predicted protein [Populus trichocarpa] gi|222856073|gb|EEE93620.1|
           predicted protein [Populus trichocarpa]
          Length = 441

 Score =  395 bits (1015), Expect(2) = e-111
 Identities = 177/231 (76%), Positives = 197/231 (85%)
 Frame = +2

Query: 257 SYSSSFKREEEKIIKEGVEFYSNGDFYEGEFHKGRSNGSGVYNYFVNGRYEGDWIDGRYD 436
           S +S  K+ E++II+EGVEFYSNGDFYEGEFHKG  NGSGVYN+FVNGRYEGDWIDGRYD
Sbjct: 175 SNNSKGKKLEKRIIREGVEFYSNGDFYEGEFHKGGCNGSGVYNFFVNGRYEGDWIDGRYD 234

Query: 437 GYGIESWAXXXXXXXXXXXXXXXXFGVYRFYTGDSYAGEWCNGQSHGVGVQTCSDGSCYV 616
           GYGIESWA                +GVYRFYTGDSYAGEW NGQSHGVGVQTC+DGSCYV
Sbjct: 235 GYGIESWARGSRYRGQYRQGLRHGYGVYRFYTGDSYAGEWFNGQSHGVGVQTCADGSCYV 294

Query: 617 GEFKCGVKHGLGCYHFRNGDRYAGEYFGDKVHGFGVYHFANGHCYEGSWHEGRKQGFGNY 796
           GEFKC VKHGLG YHFRNGDRYAGEYFGDK+HGFGVYHFANGHCYEGSWHEGRKQG+G Y
Sbjct: 295 GEFKCAVKHGLGVYHFRNGDRYAGEYFGDKMHGFGVYHFANGHCYEGSWHEGRKQGYGMY 354

Query: 797 TFRTGETKCGEWDCGVLKNPQPDFSDAVLRSVQAARKAAENAIHIPQMEDQ 949
           TFR+G+T+CGEW+ G LKNP P  SDAVLR+VQAARK  ENAIH+ ++++Q
Sbjct: 355 TFRSGDTRCGEWNGGTLKNPLPFLSDAVLRAVQAARKTEENAIHLRRVDEQ 405



 Score = 35.8 bits (81), Expect(2) = e-111
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +3

Query: 9   YVKKKRGFIIKNSSFLKQLWIERKNRRAGFS--KTGGESVQWFIGNGGTSSS 158
           +  K +  I +N    KQLW E+  +R  FS  +T  + VQWFIG+   S++
Sbjct: 127 FASKNKNLINQNLIVFKQLW-EQSTKRFNFSTSRTKSKQVQWFIGDPNVSNN 177


>emb|CBI19045.3| unnamed protein product [Vitis vinifera]
          Length = 376

 Score =  405 bits (1041), Expect = e-111
 Identities = 175/224 (78%), Positives = 196/224 (87%)
 Frame = +2

Query: 278 REEEKIIKEGVEFYSNGDFYEGEFHKGRSNGSGVYNYFVNGRYEGDWIDGRYDGYGIESW 457
           ++ ++I++EGVEFYSNGDFYEGEFHKGR NGSGVYNY VNGRYEGDWIDGRYDGYGIESW
Sbjct: 116 QKAKRIVREGVEFYSNGDFYEGEFHKGRCNGSGVYNYIVNGRYEGDWIDGRYDGYGIESW 175

Query: 458 AXXXXXXXXXXXXXXXXFGVYRFYTGDSYAGEWCNGQSHGVGVQTCSDGSCYVGEFKCGV 637
           A                +GVYRFYTGDSYAGEW NGQSHG+GVQTCSDGSCYVGEFKCGV
Sbjct: 176 ARGSRYRGQYRQGLRHGYGVYRFYTGDSYAGEWVNGQSHGIGVQTCSDGSCYVGEFKCGV 235

Query: 638 KHGLGCYHFRNGDRYAGEYFGDKVHGFGVYHFANGHCYEGSWHEGRKQGFGNYTFRTGET 817
           KHGLGCYHFRNGDRYAGEYFGDK+HGFGVYHFANGHCYEGSWHEGRKQG+G Y+FR G+T
Sbjct: 236 KHGLGCYHFRNGDRYAGEYFGDKIHGFGVYHFANGHCYEGSWHEGRKQGYGMYSFRNGDT 295

Query: 818 KCGEWDCGVLKNPQPDFSDAVLRSVQAARKAAENAIHIPQMEDQ 949
           +CGEWD G LKNP P  +DAVLR+VQAAR+ AENAIH+P++++Q
Sbjct: 296 RCGEWDSGTLKNPLPPLTDAVLRAVQAARRTAENAIHVPRVDEQ 339


>ref|XP_002284432.1| PREDICTED: uncharacterized protein LOC100245359 [Vitis vinifera]
          Length = 911

 Score =  405 bits (1041), Expect = e-111
 Identities = 175/224 (78%), Positives = 196/224 (87%)
 Frame = +2

Query: 278  REEEKIIKEGVEFYSNGDFYEGEFHKGRSNGSGVYNYFVNGRYEGDWIDGRYDGYGIESW 457
            ++ ++I++EGVEFYSNGDFYEGEFHKGR NGSGVYNY VNGRYEGDWIDGRYDGYGIESW
Sbjct: 651  QKAKRIVREGVEFYSNGDFYEGEFHKGRCNGSGVYNYIVNGRYEGDWIDGRYDGYGIESW 710

Query: 458  AXXXXXXXXXXXXXXXXFGVYRFYTGDSYAGEWCNGQSHGVGVQTCSDGSCYVGEFKCGV 637
            A                +GVYRFYTGDSYAGEW NGQSHG+GVQTCSDGSCYVGEFKCGV
Sbjct: 711  ARGSRYRGQYRQGLRHGYGVYRFYTGDSYAGEWVNGQSHGIGVQTCSDGSCYVGEFKCGV 770

Query: 638  KHGLGCYHFRNGDRYAGEYFGDKVHGFGVYHFANGHCYEGSWHEGRKQGFGNYTFRTGET 817
            KHGLGCYHFRNGDRYAGEYFGDK+HGFGVYHFANGHCYEGSWHEGRKQG+G Y+FR G+T
Sbjct: 771  KHGLGCYHFRNGDRYAGEYFGDKIHGFGVYHFANGHCYEGSWHEGRKQGYGMYSFRNGDT 830

Query: 818  KCGEWDCGVLKNPQPDFSDAVLRSVQAARKAAENAIHIPQMEDQ 949
            +CGEWD G LKNP P  +DAVLR+VQAAR+ AENAIH+P++++Q
Sbjct: 831  RCGEWDSGTLKNPLPPLTDAVLRAVQAARRTAENAIHVPRVDEQ 874


>ref|XP_002513784.1| conserved hypothetical protein [Ricinus communis]
           gi|223546870|gb|EEF48367.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 443

 Score =  386 bits (991), Expect(2) = e-110
 Identities = 167/224 (74%), Positives = 190/224 (84%)
 Frame = +2

Query: 278 REEEKIIKEGVEFYSNGDFYEGEFHKGRSNGSGVYNYFVNGRYEGDWIDGRYDGYGIESW 457
           ++E+KII+EGVEFYSNGDFYEGEFHKG+ +GSGVYNYF NGRYEGDW+DGRYDGYGIESW
Sbjct: 184 KKEKKIIREGVEFYSNGDFYEGEFHKGKCSGSGVYNYFANGRYEGDWVDGRYDGYGIESW 243

Query: 458 AXXXXXXXXXXXXXXXXFGVYRFYTGDSYAGEWCNGQSHGVGVQTCSDGSCYVGEFKCGV 637
           A                +GVY+FYTGDSYAG+WCNGQSHGVGVQTCSDGSCYVGEFKCGV
Sbjct: 244 ARGSRYRGQYRQGLRHGYGVYKFYTGDSYAGQWCNGQSHGVGVQTCSDGSCYVGEFKCGV 303

Query: 638 KHGLGCYHFRNGDRYAGEYFGDKVHGFGVYHFANGHCYEGSWHEGRKQGFGNYTFRTGET 817
           KHG+G YHFRNGD+YAGEYFGDK+HGFGVYHFANGHCYEGSWHEG +QG+G YTFR  + 
Sbjct: 304 KHGVGVYHFRNGDKYAGEYFGDKIHGFGVYHFANGHCYEGSWHEGLRQGYGMYTFRNSDA 363

Query: 818 KCGEWDCGVLKNPQPDFSDAVLRSVQAARKAAENAIHIPQMEDQ 949
           KCGEWD G+L+   P  +DAVLR VQAARK AE+AIH  +++DQ
Sbjct: 364 KCGEWDGGILRTSLPPLTDAVLRVVQAARKTAESAIHFRRVDDQ 407



 Score = 38.5 bits (88), Expect(2) = e-110
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 9   YVKKKRGFIIKNSSFLKQLWIERKNR-RAGFSKTGGESVQWFIGNGGTSSS 158
           +  K +  I +N + +KQLW E   R     S+T  + VQWFIG   T ++
Sbjct: 130 FASKNKNLINQNLTLIKQLWEENSKRLHLSTSRTKSKPVQWFIGESNTDNN 180


>ref|XP_002302247.1| predicted protein [Populus trichocarpa] gi|222843973|gb|EEE81520.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  384 bits (985), Expect(2) = e-107
 Identities = 168/224 (75%), Positives = 190/224 (84%)
 Frame = +2

Query: 275 KREEEKIIKEGVEFYSNGDFYEGEFHKGRSNGSGVYNYFVNGRYEGDWIDGRYDGYGIES 454
           K+ E++II+EGVEFYSNGDFYEGEFHKG+ NGSGVYN+FVNGRYEGDW+DGRYDGYGIES
Sbjct: 180 KKLEKRIIREGVEFYSNGDFYEGEFHKGKCNGSGVYNFFVNGRYEGDWVDGRYDGYGIES 239

Query: 455 WAXXXXXXXXXXXXXXXXFGVYRFYTGDSYAGEWCNGQSHGVGVQTCSDGSCYVGEFKCG 634
           WA                +GVYRFYTGDSYAGEW NGQSHGVGVQTC DGSCYVGEFKC 
Sbjct: 240 WARGSRYRGQYRQGLRHGYGVYRFYTGDSYAGEWFNGQSHGVGVQTCGDGSCYVGEFKCA 299

Query: 635 VKHGLGCYHFRNGDRYAGEYFGDKVHGFGVYHFANGHCYEGSWHEGRKQGFGNYTFRTGE 814
           VKHGLG YHFRNGDRYAGEYFGDK+HGFGVYHFANGHCYEGSWHEGRKQG+G YTFR G+
Sbjct: 300 VKHGLGVYHFRNGDRYAGEYFGDKMHGFGVYHFANGHCYEGSWHEGRKQGYGMYTFRGGD 359

Query: 815 TKCGEWDCGVLKNPQPDFSDAVLRSVQAARKAAENAIHIPQMED 946
           T+CGEWD G L+   P  +D VLR+VQ+AR+ AENAIH+ ++++
Sbjct: 360 TRCGEWDVGNLRTSLPPITDPVLRAVQSARRTAENAIHLRRVDE 403



 Score = 32.7 bits (73), Expect(2) = e-107
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 9   YVKKKRGFIIKNSSFLKQLW-IERKNRRAGFSKTGGESVQWFIGNGGTSSS 158
           +  K +  I +N    KQLW +  K      S+T  + VQWFIG+   +++
Sbjct: 126 FASKNKNLINQNMIVFKQLWEVNTKRFNLCTSRTKSKQVQWFIGDPNVNNN 176


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