BLASTX nr result

ID: Coptis24_contig00020969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020969
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61076.1| hypothetical protein VITISV_012918 [Vitis vinifera]    69   9e-10
ref|XP_003633332.1| PREDICTED: uncharacterized protein LOC100251...    67   4e-09

>emb|CAN61076.1| hypothetical protein VITISV_012918 [Vitis vinifera]
          Length = 459

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
 Frame = +1

Query: 244 WVHGTVVAL----FLIFAVSFTCLLTSILLCFLAIFAAFTKLKPGVKCENISSSLNTSVV 411
           WV   V  L    FL F V  + L+TS  L    +   F+K +P V+ E++         
Sbjct: 14  WVAALVPVLIFAGFLGFGV-LSILITSSALILSTVLFTFSKQRPVVEEESLKEEEKVEEE 72

Query: 412 EELGE-------QQKPKEKEVTA------DKLSQQDDASK------IHDYISRSIDLSSE 534
           EE  E       +  P  +EV +      D ++Q+D+A +      +++YI  S D  S+
Sbjct: 73  EEEEEVLRSDHHESLPHMEEVASRTQTETDTITQRDEAQESGMSHQMNEYIDESPDSLSK 132

Query: 535 NESIDLSSTSEDSDGYWQSGSNMGGLLTCXXXXXXXXXXLIEIALPEGHYICPKDE 702
            ES+D SSTS++S+  W    N G    C          LIEIAL  GHY+ PK E
Sbjct: 133 TESLDQSSTSDESEVEWPFPDNAGQSPECSDGSISDEDSLIEIALLSGHYVDPKQE 188


>ref|XP_003633332.1| PREDICTED: uncharacterized protein LOC100251126 [Vitis vinifera]
          Length = 262

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
 Frame = +1

Query: 244 WVHGTVVAL----FLIFAVSFTCLLTSILLCFLAIFAAFTKLKPGVKCENISSSLNTSVV 411
           WV   V  L    FL F V  + L+TS  L    +   F+K +P V+ E++         
Sbjct: 24  WVAALVPVLIFAGFLGFGV-LSILITSSALILSTVLFTFSKQRPVVEEESLKEEEEKVEE 82

Query: 412 EELGEQQK-----------PKEKEVTA------DKLSQQDDASK------IHDYISRSID 522
           EE  E+++           P  +EV +      D + Q+D+A +      +++YI  S D
Sbjct: 83  EEEEEEEEEVLRSDHHESLPHMEEVASRTQTETDTIIQRDEAQESGMSHQMNEYIDESPD 142

Query: 523 LSSENESIDLSSTSEDSDGYWQSGSNMGGLLTCXXXXXXXXXXLIEIALPEGHYICPKDE 702
             S+ ES+D SSTS++S+  W    N G    C          LIEIAL  GHY+ PK E
Sbjct: 143 SLSKTESLDQSSTSDESEVEWPFPDNAGQSPECSDGSISDEDSLIEIALLSGHYVDPKQE 202


Top