BLASTX nr result
ID: Coptis24_contig00020956
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020956 (1065 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278976.2| PREDICTED: DNA repair protein recA homolog 2... 400 e-109 ref|XP_002533897.1| DNA repair protein reca, putative [Ricinus c... 375 e-101 ref|XP_002323326.1| predicted protein [Populus trichocarpa] gi|2... 370 e-100 ref|NP_187625.2| DNA repair protein recA-like 2 [Arabidopsis tha... 356 6e-96 ref|XP_003554153.1| PREDICTED: DNA repair protein recA homolog 2... 355 1e-95 >ref|XP_002278976.2| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like [Vitis vinifera] gi|296087050|emb|CBI33377.3| unnamed protein product [Vitis vinifera] Length = 398 Score = 400 bits (1027), Expect = e-109 Identities = 209/322 (64%), Positives = 260/322 (80%), Gaps = 3/322 (0%) Frame = +3 Query: 108 IYTRSLSSAAEIISEYEGDKLHDNEKALGKDTALRLAISQVAGEFGRDSMLSLRRFFGLR 287 ++TRSLSS+ E + E E D+ ++ KA KDTALRLAIS++AG+FGR+SMLSL+RFF R Sbjct: 41 MHTRSLSSSVEFL-EIECDEYGNDVKAAEKDTALRLAISRLAGDFGRESMLSLQRFFVSR 99 Query: 288 YAPIVSTGSLKLDVALGLGGLPKGRIVEIYGPESSGKTTLGLHIIKEAQKHGGYCAFIDV 467 +AP++STGSLKLD+ALG+GGLPKGRIVEIYG E+SGKTTL LHIIKEAQK GGYCA++DV Sbjct: 100 HAPVISTGSLKLDLALGIGGLPKGRIVEIYGQEASGKTTLALHIIKEAQKLGGYCAYLDV 159 Query: 468 ENALDPSLAESMGVNTDRLLIARPNSAENLLSITNTLAKSGSVEVIVVDSVAALTSQYEL 647 ENA++PS AESMGVN D LLI+ P+SAENLLS+ NTL KSGS++VIVVDSVAAL Q+EL Sbjct: 160 ENAMNPSFAESMGVNVDNLLISPPDSAENLLSMVNTLTKSGSMDVIVVDSVAALVPQHEL 219 Query: 648 DVGIDGPCRGIQSRLMTQAVRKISSSLCHSGTLLVFLNQVRSRPCEGLGYA---TVTCGG 818 DV I G + +QS++M QA+RKI SLC S TL++F+NQVRS G+ VTCGG Sbjct: 220 DVVIGGTYQDVQSQIMAQALRKIHYSLCRSETLIIFVNQVRSSLKSSHGFGRLDEVTCGG 279 Query: 819 NALEFYSAVRMKIFRKGLIREEDEIAGLSVCVEVVKNKLAPAMKMADLDIIYGKGIPYEA 998 NAL FY+AVR+++ R GL+R ED++ GL VCV+VVKNKLA A K ADL I +G+GI +E+ Sbjct: 280 NALRFYAAVRLRVMRTGLLRTEDKVTGLGVCVQVVKNKLAHATKKADLGIQFGRGICFES 339 Query: 999 EVLEMACKQGVIMKRDSGYCIE 1064 EVLE+AC+ GVI K S Y IE Sbjct: 340 EVLELACEHGVIWKEGSKYIIE 361 >ref|XP_002533897.1| DNA repair protein reca, putative [Ricinus communis] gi|223526148|gb|EEF28487.1| DNA repair protein reca, putative [Ricinus communis] Length = 388 Score = 375 bits (963), Expect = e-101 Identities = 207/340 (60%), Positives = 254/340 (74%), Gaps = 5/340 (1%) Frame = +3 Query: 60 LYSSFFRSLHMINSNRIYTRSLSSAAEIIS--EYEGDKLHDNEKALGKDTALRLAISQVA 233 L SSFF SL N T SL ++ ++E DKL D+ +A+ K L LA+ +++ Sbjct: 18 LCSSFFPSLSQNMRNEAIT-SLGRGPRLLCSLDFECDKLIDDSEAMEKHNKLFLALKEIS 76 Query: 234 GEFGRDSMLSLRRFFGLRYAPIVSTGSLKLDVALGLGGLPKGRIVEIYGPESSGKTTLGL 413 GEF R+SMLSL RFF R A ++STGSLKLD+ALG+GGLPKGR+VEIYG E+SGKTTL L Sbjct: 77 GEFCRESMLSLHRFFSSRQASVISTGSLKLDLALGIGGLPKGRMVEIYGQEASGKTTLAL 136 Query: 414 HIIKEAQKHGGYCAFIDVENALDPSLAESMGVNTDRLLIARPNSAENLLSITNTLAKSGS 593 HIIKEAQK GGYCA++D ENALDPSL ESMGVNT+ LLI+ P+SAENLLS+ +TL KSGS Sbjct: 137 HIIKEAQKCGGYCAYLDAENALDPSLVESMGVNTENLLISPPDSAENLLSVVDTLTKSGS 196 Query: 594 VEVIVVDSVAALTSQYELDVGIDGPCRGIQSRLMTQAVRKISSSLCHSGTLLVFLNQVRS 773 V+VIVVDSVAAL Q ELD + G QSR+M+QAVRKI+ SL S TL++FLNQVR+ Sbjct: 197 VDVIVVDSVAALVPQLELDTML-GSTEDRQSRIMSQAVRKINYSLSQSKTLIIFLNQVRA 255 Query: 774 RPCEGLGYATV---TCGGNALEFYSAVRMKIFRKGLIREEDEIAGLSVCVEVVKNKLAPA 944 G G V TCGGNAL+FYSAVR+++ RK L++ EDEI GL V V+VVKNKLAPA Sbjct: 256 NVKSGQGLGQVDEATCGGNALKFYSAVRLRMARKALLKTEDEITGLRVSVQVVKNKLAPA 315 Query: 945 MKMADLDIIYGKGIPYEAEVLEMACKQGVIMKRDSGYCIE 1064 MK A+L I +G+G E+EVLE+AC+ GVI + S YCIE Sbjct: 316 MKKAELGIQFGRGFCSESEVLELACEYGVIRQEGSTYCIE 355 >ref|XP_002323326.1| predicted protein [Populus trichocarpa] gi|222867956|gb|EEF05087.1| predicted protein [Populus trichocarpa] Length = 323 Score = 370 bits (951), Expect = e-100 Identities = 189/289 (65%), Positives = 231/289 (79%) Frame = +3 Query: 195 KDTALRLAISQVAGEFGRDSMLSLRRFFGLRYAPIVSTGSLKLDVALGLGGLPKGRIVEI 374 KD ALRLA++Q+AGEFGR+SMLSL+RFF R AP++STGSLKLD+ALG+GGLPKGR+VEI Sbjct: 2 KDNALRLALTQLAGEFGRESMLSLQRFFNSRRAPVISTGSLKLDLALGIGGLPKGRMVEI 61 Query: 375 YGPESSGKTTLGLHIIKEAQKHGGYCAFIDVENALDPSLAESMGVNTDRLLIARPNSAEN 554 YG E+SGKTTL LHIIKEAQK GGYCA++DVENA+DP L ESMG+NT+ LLI+ P+ AEN Sbjct: 62 YGKEASGKTTLALHIIKEAQKLGGYCAYLDVENAMDPLLPESMGINTENLLISHPDCAEN 121 Query: 555 LLSITNTLAKSGSVEVIVVDSVAALTSQYELDVGIDGPCRGIQSRLMTQAVRKISSSLCH 734 LLS+ +TL KSGSV+VIVVDSVAAL Q E+D + G IQSRLMTQA+RKI+ SLC Sbjct: 122 LLSVVDTLTKSGSVDVIVVDSVAALVPQREIDTAVGGTFEDIQSRLMTQALRKINYSLCQ 181 Query: 735 SGTLLVFLNQVRSRPCEGLGYATVTCGGNALEFYSAVRMKIFRKGLIREEDEIAGLSVCV 914 S TL++FLNQVR G VTCGGNAL+FYSAVR+++ R L++ ED I GL VC Sbjct: 182 SQTLIIFLNQVRKSLKSGRA-EEVTCGGNALKFYSAVRLRMIRTRLLKTEDRITGLGVCA 240 Query: 915 EVVKNKLAPAMKMADLDIIYGKGIPYEAEVLEMACKQGVIMKRDSGYCI 1061 +VVKNKLAPAM A+L+I +G+G E+EVLE+AC+ +I K S Y I Sbjct: 241 QVVKNKLAPAMTKAELEIQFGRGFCSESEVLELACEHSLIKKEGSSYVI 289 >ref|NP_187625.2| DNA repair protein recA-like 2 [Arabidopsis thaliana] gi|75158993|sp|Q8RY99.1|RECAM_ARATH RecName: Full=DNA repair protein recA homolog 2, mitochondrial; AltName: Full=Recombinase A homolog 2; Flags: Precursor gi|18996122|gb|AAL79768.1| RecA protein [Arabidopsis thaliana] gi|22531124|gb|AAM97066.1| putative RecA protein [Arabidopsis thaliana] gi|23198012|gb|AAN15533.1| putative RecA protein [Arabidopsis thaliana] gi|332641343|gb|AEE74864.1| DNA repair protein recA-like 2 [Arabidopsis thaliana] Length = 389 Score = 356 bits (913), Expect = 6e-96 Identities = 192/341 (56%), Positives = 249/341 (73%), Gaps = 10/341 (2%) Frame = +3 Query: 72 FFRSLHMINSNRIY-------TRSLSSAAEIISEYEGDKLHDNEKALGKDTALRLAISQV 230 FF L +N R R LSS E S+ E D++ D+ K KDTAL LA+SQ+ Sbjct: 15 FFSYLSQLNGRRSVLACSGYENRYLSSLVEA-SDCELDEVPDDRKVAEKDTALHLALSQL 73 Query: 231 AGEFGRDSMLSLRRFFGLRYAPIVSTGSLKLDVALGLGGLPKGRIVEIYGPESSGKTTLG 410 +G+F +DS LSL+RF+ R ++STGSL LD+ALG+GGLPKGR+VE+YG E+SGKTTL Sbjct: 74 SGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKTTLA 133 Query: 411 LHIIKEAQKHGGYCAFIDVENALDPSLAESMGVNTDRLLIARPNSAENLLSITNTLAKSG 590 LHIIKEAQK GGYCA++D ENA+DPSLAES+GVNT+ LLI+RP+SAE +L+I + L KSG Sbjct: 134 LHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKMLNIVDVLTKSG 193 Query: 591 SVEVIVVDSVAALTSQYELDVGIDGPCRGIQSRLMTQAVRKISSSLCHSGTLLVFLNQVR 770 SV+VIVVDSVAAL Q ELD + R QSR+MTQA+RKI S+ +S TL+VFLNQVR Sbjct: 194 SVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQVR 253 Query: 771 SRPCEGLGY---ATVTCGGNALEFYSAVRMKIFRKGLIREEDEIAGLSVCVEVVKNKLAP 941 S + + VTCGGNAL F++A+R+K+ R GLI+ ++I+GL+VCV+VVKNKLAP Sbjct: 254 SHVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNVCVQVVKNKLAP 313 Query: 942 AMKMADLDIIYGKGIPYEAEVLEMACKQGVIMKRDSGYCIE 1064 K ++L I +G G E EVLE+AC+ GVI++ + Y IE Sbjct: 314 GKKKSELGIHFGHGFYVEREVLELACEHGVILREGTSYFIE 354 >ref|XP_003554153.1| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like [Glycine max] Length = 386 Score = 355 bits (910), Expect = 1e-95 Identities = 187/319 (58%), Positives = 247/319 (77%), Gaps = 4/319 (1%) Frame = +3 Query: 120 SLSSAAEIISEYEGDKLHDNEKALGKDTALRLAISQVAGEFGRDSMLSLRRFFGLRYAPI 299 SLSSAAE S++E D +HD+ KA KD AL LA+SQ+A EF ++SMLSL++ FG+R A + Sbjct: 36 SLSSAAEA-SDFECDAIHDDVKAAEKDNALCLAVSQLASEFSKESMLSLQKIFGVRRAHV 94 Query: 300 VSTGSLKLDVALGLGGLPKGRIVEIYGPESSGKTTLGLHIIKEAQKHGGYCAFIDVENAL 479 +STGSLKLD+ALG+GGLPKGRIVEIYG E++GKTTL + IIKEAQK GGYCA++DVENAL Sbjct: 95 ISTGSLKLDLALGIGGLPKGRIVEIYGREAAGKTTLAIQIIKEAQKLGGYCAYLDVENAL 154 Query: 480 DPSLAESMGVNTDRLLIARPNSAENLLSITNTLAKSGSVEVIVVDSVAALTSQYELDVGI 659 D SL ESMG++T+ LLI+ P+ AENLLS+ +TL KSG+V+VIV+DSVAAL + ELD Sbjct: 155 DFSLMESMGIDTENLLISHPDCAENLLSMVDTLTKSGAVDVIVIDSVAALVPKCELDQLG 214 Query: 660 DGPCRGIQSRLMTQAVRKISSSLCHSGTLLVFLNQVRSRPCEGLGYAT---VTCGGNALE 830 R +QSR+MTQA+RKI SL HS TL+VF+NQ+R P Y + VTCGGNAL Sbjct: 215 VTTNRDLQSRMMTQALRKIHYSLSHSQTLIVFINQIRLSPKSAKEYGSVEEVTCGGNALR 274 Query: 831 FYSAVRMKIFRKGLIREEDEIAGLSVCVEVVKNKLAP-AMKMADLDIIYGKGIPYEAEVL 1007 FY+AVR+++ R LI+ ED++ G+ +C +VVKNKLAP A K A+L I +G+G +E++VL Sbjct: 275 FYAAVRLRLSRVRLIKTEDKVEGVMICAQVVKNKLAPAATKRAELGIKFGRGFCHESDVL 334 Query: 1008 EMACKQGVIMKRDSGYCIE 1064 ++AC+ G+ +K + Y IE Sbjct: 335 DLACEHGIFVKHEGSYFIE 353