BLASTX nr result

ID: Coptis24_contig00020947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020947
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303864.1| predicted protein [Populus trichocarpa] gi|2...   231   7e-62
ref|XP_002297677.1| predicted protein [Populus trichocarpa] gi|2...   231   2e-61
ref|XP_002272318.1| PREDICTED: uncharacterized protein LOC100246...   221   9e-59
gb|AAR14272.1| predicted protein [Populus tremula x Populus alba]     219   6e-58
ref|NP_001238178.1| uncharacterized protein LOC100306395 [Glycin...   222   1e-57

>ref|XP_002303864.1| predicted protein [Populus trichocarpa] gi|222841296|gb|EEE78843.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  231 bits (589), Expect(2) = 7e-62
 Identities = 125/183 (68%), Positives = 144/183 (78%), Gaps = 4/183 (2%)
 Frame = -2

Query: 729 AANGQNLPKETEDPLNAEPNKQEDSPMIEKTPVIENAQESASTPPALSERRKALFEPLEP 550
           +A+G+NL K TE+ +N  PNKQE+S   EK        E  +    LSERRKALFEPLEP
Sbjct: 39  SASGRNLDKVTENTVNETPNKQEESSTDEK-------MEDPNPASELSERRKALFEPLEP 91

Query: 549 TF---GRRLLDEALAPPPDFDAASYPKGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDRE 379
                G+RL  E+L PPPDFDAASYPKGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDRE
Sbjct: 92  VTNINGKRLPAESLLPPPDFDAASYPKGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDRE 151

Query: 378 INGLNEQLEDDARIIGHLQLQLLQERSKRADVERENTVLQNQVSMLMNMLQETEEV-DEG 202
           I+GLNEQLE+DAR + HLQLQLLQE+SKR +VEREN +LQ+Q+SMLMNMLQE E++ DE 
Sbjct: 152 IDGLNEQLEEDARCLEHLQLQLLQEKSKRTEVERENAMLQDQISMLMNMLQENEQLGDED 211

Query: 201 TDD 193
             D
Sbjct: 212 VGD 214



 Score = 33.5 bits (75), Expect(2) = 7e-62
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = -3

Query: 896 MKSEEKDSLMDGFSAISETRVFWNSRKSS 810
           MK  E + L +GFS +S TRVFW SRK S
Sbjct: 12  MKMVEAEPL-NGFSPVSSTRVFWKSRKRS 39


>ref|XP_002297677.1| predicted protein [Populus trichocarpa] gi|222844935|gb|EEE82482.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  231 bits (588), Expect(2) = 2e-61
 Identities = 125/188 (66%), Positives = 146/188 (77%), Gaps = 9/188 (4%)
 Frame = -2

Query: 729 AANGQNLPKETEDPLNAEPNKQEDSPMIEKTPVIENAQESASTPPALSERRKALFEPLEP 550
           +A+G+NL K TED +N  PNKQE+S   EK        +  +  P LSERRKALFEPLEP
Sbjct: 40  SASGRNLDKVTEDNVNETPNKQEESSNDEK-------MQDQNLTPELSERRKALFEPLEP 92

Query: 549 TF---GRRLLDEALAPPPDFDAASYPKGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDRE 379
                G+R   E+L PPPDFDAASYPKGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDRE
Sbjct: 93  VTNINGKRSSAESLLPPPDFDAASYPKGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDRE 152

Query: 378 INGLNEQLEDDARIIGHLQLQLLQERSKRADVERENTVLQNQVSMLMNMLQETEEV---- 211
           I+GLNEQLE+DAR + HLQLQLLQE+SKRA+VEREN +LQ+Q+SMLMN+LQE E +    
Sbjct: 153 IDGLNEQLEEDARCLEHLQLQLLQEKSKRAEVERENAMLQDQISMLMNVLQENEPMGDED 212

Query: 210 --DEGTDD 193
             +EG D+
Sbjct: 213 LGNEGPDE 220



 Score = 32.3 bits (72), Expect(2) = 2e-61
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -3

Query: 869 MDGFSAISETRVFWNSRKSS 810
           ++GFS +S TR+FW SRK S
Sbjct: 21  LNGFSPVSSTRIFWKSRKRS 40


>ref|XP_002272318.1| PREDICTED: uncharacterized protein LOC100246715 [Vitis vinifera]
           gi|147792903|emb|CAN68795.1| hypothetical protein
           VITISV_016175 [Vitis vinifera]
           gi|298204768|emb|CBI25266.3| unnamed protein product
           [Vitis vinifera]
          Length = 201

 Score =  221 bits (563), Expect(2) = 9e-59
 Identities = 117/180 (65%), Positives = 140/180 (77%), Gaps = 1/180 (0%)
 Frame = -2

Query: 729 AANGQNLPKETEDPLNAEPNKQEDSPMIEKTPVIENAQESASTPPALSERRKALFEPLEP 550
           + +G+NL K  ED  +  P KQ++SP           +E+      LSERRKALFEPLEP
Sbjct: 31  SGSGRNLEKVAEDTSDNTPKKQDESP----------PEETMQDISVLSERRKALFEPLEP 80

Query: 549 TFGRRLLDEALAPPPDFDAASYPKGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREING 370
             G R L E+L PPPDFD+A+YP+GWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREING
Sbjct: 81  LTGSRPLAESLLPPPDFDSANYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREING 140

Query: 369 LNEQLEDDARIIGHLQLQLLQERSKRADVERENTVLQNQVSMLMNMLQETEEVD-EGTDD 193
           LN QLEDDAR + HLQ+QLLQERSKRA+VEREN +L++Q+SMLMNMLQE E ++ E T++
Sbjct: 141 LNGQLEDDARCLEHLQVQLLQERSKRAEVERENLMLKDQLSMLMNMLQEQEAMENESTEE 200



 Score = 33.1 bits (74), Expect(2) = 9e-59
 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = -3

Query: 887 EEKDSLMDGFSAISE-TRVFWNSRKSS 810
           ++ D  +DGFS +S  TRVFWNSR+ S
Sbjct: 5   KKPDGNLDGFSTVSSSTRVFWNSRRRS 31


>gb|AAR14272.1| predicted protein [Populus tremula x Populus alba]
          Length = 221

 Score =  219 bits (558), Expect(2) = 6e-58
 Identities = 122/188 (64%), Positives = 142/188 (75%), Gaps = 9/188 (4%)
 Frame = -2

Query: 729 AANGQNLPKETEDPLNAEPNKQEDSPMIEKTPVIENAQESASTPPALSERRKALFEPLEP 550
           +A+G+NL K TED +N  PNKQE+S   EK        +  +    LSERRKALFEPLEP
Sbjct: 40  SASGRNLDKVTEDNVNETPNKQEESSNDEK-------MQDQNLTRELSERRKALFEPLEP 92

Query: 549 TF---GRRLLDEALAPPPDFDAASYPKGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDRE 379
                G+R   E+L PPPDFDAASYPKG LIGKKRKLVNVDVVESMRRIAV EMNRKDRE
Sbjct: 93  VTNINGKRSSAESLLPPPDFDAASYPKGRLIGKKRKLVNVDVVESMRRIAVHEMNRKDRE 152

Query: 378 INGLNEQLEDDARIIGHLQLQLLQERSKRADVERENTVLQNQVSMLMNMLQETEEV---- 211
           I+GLNEQLE+DAR + HLQLQLLQE+SKRA+VERE  +LQ+Q+SMLMNMLQE E +    
Sbjct: 153 IDGLNEQLEEDARCLEHLQLQLLQEKSKRAEVEREKAMLQDQISMLMNMLQENEPMGDED 212

Query: 210 --DEGTDD 193
             +EG D+
Sbjct: 213 LENEGPDE 220



 Score = 32.3 bits (72), Expect(2) = 6e-58
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -3

Query: 869 MDGFSAISETRVFWNSRKSS 810
           ++GFS +S TR+FW SRK S
Sbjct: 21  LNGFSPVSSTRIFWKSRKRS 40


>ref|NP_001238178.1| uncharacterized protein LOC100306395 [Glycine max]
           gi|255628399|gb|ACU14544.1| unknown [Glycine max]
          Length = 214

 Score =  222 bits (566), Expect(2) = 1e-57
 Identities = 121/183 (66%), Positives = 146/183 (79%), Gaps = 4/183 (2%)
 Frame = -2

Query: 729 AANGQNLPKETEDPLNAEPNKQEDSPMIEKTPVIENAQESASTPPALSERRKALFEPLEP 550
           +A+G+NL + +ED  N  P+KQED+P     P  E  Q +  TP  +SERRKALFEPLEP
Sbjct: 36  SASGRNL-EVSEDTANKPPSKQEDTPPPPPPPSSEEVQNT--TP--ISERRKALFEPLEP 90

Query: 549 TF---GRRLLDEALAPPPDFDAASYPKGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDRE 379
                GRR L E+L PPPDF++A+YPKGWLIGKKRKLVNVDVVESMRRIA+QEMNRKDRE
Sbjct: 91  IMNINGRRPLAESLLPPPDFESANYPKGWLIGKKRKLVNVDVVESMRRIAIQEMNRKDRE 150

Query: 378 INGLNEQLEDDARIIGHLQLQLLQERSKRADVERENTVLQNQVSMLMNMLQETEEV-DEG 202
           I+GLNEQLE+D+R + HLQLQL+ E+SKRA VEREN +LQ QV+MLMNMLQE E++ DEG
Sbjct: 151 IDGLNEQLEEDSRCLEHLQLQLVDEKSKRARVERENAMLQEQVNMLMNMLQEAEQMGDEG 210

Query: 201 TDD 193
            D+
Sbjct: 211 PDE 213



 Score = 28.1 bits (61), Expect(2) = 1e-57
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 878 DSLMDGFSAISETRVFWNSRKSS 810
           D  ++ FS +S  R+FW SR+ S
Sbjct: 14  DDALNAFSPVSTPRIFWKSRRRS 36


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