BLASTX nr result
ID: Coptis24_contig00020938
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020938 (306 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEI72269.1| histone H2A [Citrus trifoliata] 125 5e-27 ref|XP_002284305.1| PREDICTED: probable histone H2A.4 isoform 1 ... 125 5e-27 ref|XP_002274570.1| PREDICTED: probable histone H2A.4 isoform 1 ... 125 5e-27 ref|NP_195876.1| histone H2A 12 [Arabidopsis thaliana] gi|753117... 124 6e-27 gb|ABK26850.1| unknown [Picea sitchensis] 124 8e-27 >gb|AEI72269.1| histone H2A [Citrus trifoliata] Length = 150 Score = 125 bits (313), Expect = 5e-27 Identities = 60/67 (89%), Positives = 66/67 (98%) Frame = -1 Query: 201 VTKSVKSGLQFPVGRVARYLKKGRYSQRVGTGAPIYLAAVMEYLAAEVLELAGNAARDNK 22 V++SVK+GLQFPVGR+ RYLKKGRYSQRVGTGAP+YLAAV+EYLAAEVLELAGNAARDNK Sbjct: 24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 83 Query: 21 KNRIIPR 1 KNRIIPR Sbjct: 84 KNRIIPR 90 >ref|XP_002284305.1| PREDICTED: probable histone H2A.4 isoform 1 [Vitis vinifera] gi|147841321|emb|CAN60181.1| hypothetical protein VITISV_014244 [Vitis vinifera] gi|297746122|emb|CBI16178.3| unnamed protein product [Vitis vinifera] Length = 149 Score = 125 bits (313), Expect = 5e-27 Identities = 60/67 (89%), Positives = 66/67 (98%) Frame = -1 Query: 201 VTKSVKSGLQFPVGRVARYLKKGRYSQRVGTGAPIYLAAVMEYLAAEVLELAGNAARDNK 22 V++SVK+GLQFPVGR+ RYLKKGRYSQRVGTGAP+YLAAV+EYLAAEVLELAGNAARDNK Sbjct: 24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 83 Query: 21 KNRIIPR 1 KNRIIPR Sbjct: 84 KNRIIPR 90 >ref|XP_002274570.1| PREDICTED: probable histone H2A.4 isoform 1 [Vitis vinifera] gi|147769777|emb|CAN63391.1| hypothetical protein VITISV_009336 [Vitis vinifera] Length = 149 Score = 125 bits (313), Expect = 5e-27 Identities = 60/67 (89%), Positives = 66/67 (98%) Frame = -1 Query: 201 VTKSVKSGLQFPVGRVARYLKKGRYSQRVGTGAPIYLAAVMEYLAAEVLELAGNAARDNK 22 V++SVK+GLQFPVGR+ RYLKKGRYSQRVGTGAP+YLAAV+EYLAAEVLELAGNAARDNK Sbjct: 24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 83 Query: 21 KNRIIPR 1 KNRIIPR Sbjct: 84 KNRIIPR 90 >ref|NP_195876.1| histone H2A 12 [Arabidopsis thaliana] gi|75311717|sp|Q9LZ46.1|H2A4_ARATH RecName: Full=Probable histone H2A.4; AltName: Full=HTA12 gi|7413645|emb|CAB85993.1| putative protein [Arabidopsis thaliana] gi|21553646|gb|AAM62739.1| histone H2A [Arabidopsis thaliana] gi|98961093|gb|ABF59030.1| At5g02560 [Arabidopsis thaliana] gi|332003106|gb|AED90489.1| histone H2A 12 [Arabidopsis thaliana] Length = 153 Score = 124 bits (312), Expect = 6e-27 Identities = 60/67 (89%), Positives = 66/67 (98%) Frame = -1 Query: 201 VTKSVKSGLQFPVGRVARYLKKGRYSQRVGTGAPIYLAAVMEYLAAEVLELAGNAARDNK 22 V++SVKSGLQFPVGR+ RYLKKGRYS+RVGTGAP+YLAAV+EYLAAEVLELAGNAARDNK Sbjct: 25 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 84 Query: 21 KNRIIPR 1 KNRIIPR Sbjct: 85 KNRIIPR 91 >gb|ABK26850.1| unknown [Picea sitchensis] Length = 141 Score = 124 bits (311), Expect = 8e-27 Identities = 59/67 (88%), Positives = 67/67 (100%) Frame = -1 Query: 201 VTKSVKSGLQFPVGRVARYLKKGRYSQRVGTGAPIYLAAVMEYLAAEVLELAGNAARDNK 22 V+KS+K+GLQFPVGR+ARYLKKGRY+QR+GTGAP+YLAAV+EYLAAEVLELAGNAARDNK Sbjct: 24 VSKSLKAGLQFPVGRIARYLKKGRYAQRLGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 83 Query: 21 KNRIIPR 1 KNRIIPR Sbjct: 84 KNRIIPR 90