BLASTX nr result

ID: Coptis24_contig00020938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020938
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI72269.1| histone H2A [Citrus trifoliata]                        125   5e-27
ref|XP_002284305.1| PREDICTED: probable histone H2A.4 isoform 1 ...   125   5e-27
ref|XP_002274570.1| PREDICTED: probable histone H2A.4 isoform 1 ...   125   5e-27
ref|NP_195876.1| histone H2A 12 [Arabidopsis thaliana] gi|753117...   124   6e-27
gb|ABK26850.1| unknown [Picea sitchensis]                             124   8e-27

>gb|AEI72269.1| histone H2A [Citrus trifoliata]
          Length = 150

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/67 (89%), Positives = 66/67 (98%)
 Frame = -1

Query: 201 VTKSVKSGLQFPVGRVARYLKKGRYSQRVGTGAPIYLAAVMEYLAAEVLELAGNAARDNK 22
           V++SVK+GLQFPVGR+ RYLKKGRYSQRVGTGAP+YLAAV+EYLAAEVLELAGNAARDNK
Sbjct: 24  VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 83

Query: 21  KNRIIPR 1
           KNRIIPR
Sbjct: 84  KNRIIPR 90


>ref|XP_002284305.1| PREDICTED: probable histone H2A.4 isoform 1 [Vitis vinifera]
           gi|147841321|emb|CAN60181.1| hypothetical protein
           VITISV_014244 [Vitis vinifera]
           gi|297746122|emb|CBI16178.3| unnamed protein product
           [Vitis vinifera]
          Length = 149

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/67 (89%), Positives = 66/67 (98%)
 Frame = -1

Query: 201 VTKSVKSGLQFPVGRVARYLKKGRYSQRVGTGAPIYLAAVMEYLAAEVLELAGNAARDNK 22
           V++SVK+GLQFPVGR+ RYLKKGRYSQRVGTGAP+YLAAV+EYLAAEVLELAGNAARDNK
Sbjct: 24  VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 83

Query: 21  KNRIIPR 1
           KNRIIPR
Sbjct: 84  KNRIIPR 90


>ref|XP_002274570.1| PREDICTED: probable histone H2A.4 isoform 1 [Vitis vinifera]
           gi|147769777|emb|CAN63391.1| hypothetical protein
           VITISV_009336 [Vitis vinifera]
          Length = 149

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/67 (89%), Positives = 66/67 (98%)
 Frame = -1

Query: 201 VTKSVKSGLQFPVGRVARYLKKGRYSQRVGTGAPIYLAAVMEYLAAEVLELAGNAARDNK 22
           V++SVK+GLQFPVGR+ RYLKKGRYSQRVGTGAP+YLAAV+EYLAAEVLELAGNAARDNK
Sbjct: 24  VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 83

Query: 21  KNRIIPR 1
           KNRIIPR
Sbjct: 84  KNRIIPR 90


>ref|NP_195876.1| histone H2A 12 [Arabidopsis thaliana]
           gi|75311717|sp|Q9LZ46.1|H2A4_ARATH RecName:
           Full=Probable histone H2A.4; AltName: Full=HTA12
           gi|7413645|emb|CAB85993.1| putative protein [Arabidopsis
           thaliana] gi|21553646|gb|AAM62739.1| histone H2A
           [Arabidopsis thaliana] gi|98961093|gb|ABF59030.1|
           At5g02560 [Arabidopsis thaliana]
           gi|332003106|gb|AED90489.1| histone H2A 12 [Arabidopsis
           thaliana]
          Length = 153

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/67 (89%), Positives = 66/67 (98%)
 Frame = -1

Query: 201 VTKSVKSGLQFPVGRVARYLKKGRYSQRVGTGAPIYLAAVMEYLAAEVLELAGNAARDNK 22
           V++SVKSGLQFPVGR+ RYLKKGRYS+RVGTGAP+YLAAV+EYLAAEVLELAGNAARDNK
Sbjct: 25  VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 84

Query: 21  KNRIIPR 1
           KNRIIPR
Sbjct: 85  KNRIIPR 91


>gb|ABK26850.1| unknown [Picea sitchensis]
          Length = 141

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/67 (88%), Positives = 67/67 (100%)
 Frame = -1

Query: 201 VTKSVKSGLQFPVGRVARYLKKGRYSQRVGTGAPIYLAAVMEYLAAEVLELAGNAARDNK 22
           V+KS+K+GLQFPVGR+ARYLKKGRY+QR+GTGAP+YLAAV+EYLAAEVLELAGNAARDNK
Sbjct: 24  VSKSLKAGLQFPVGRIARYLKKGRYAQRLGTGAPVYLAAVLEYLAAEVLELAGNAARDNK 83

Query: 21  KNRIIPR 1
           KNRIIPR
Sbjct: 84  KNRIIPR 90


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