BLASTX nr result

ID: Coptis24_contig00020933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020933
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297976.1| inner membrane protein [Populus trichocarpa]...   123   2e-26
ref|XP_003529306.1| PREDICTED: mitochondrial inner membrane prot...   119   3e-25
ref|XP_002880242.1| hypothetical protein ARALYDRAFT_483801 [Arab...   116   2e-24
ref|XP_003542770.1| PREDICTED: mitochondrial inner membrane prot...   115   3e-24
ref|XP_002308102.1| inner membrane protein [Populus trichocarpa]...   114   8e-24

>ref|XP_002297976.1| inner membrane protein [Populus trichocarpa]
           gi|222845234|gb|EEE82781.1| inner membrane protein
           [Populus trichocarpa]
          Length = 459

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/75 (77%), Positives = 67/75 (89%)
 Frame = -2

Query: 225 SEVAIAAADSYFPVAALQYIIDGVHSFTGLNWWASIVLTTFMIRGCTVPLLINQLKASSK 46
           +EVAIAAADSYFPVAALQ++ID VHSFTG NWWASI++TT +IRG TVPLLINQLKA++K
Sbjct: 129 NEVAIAAADSYFPVAALQHVIDAVHSFTGFNWWASIIVTTLLIRGATVPLLINQLKATTK 188

Query: 45  LAKMRPELEEIKDQM 1
           L  MRP LEEI+ QM
Sbjct: 189 LTLMRPHLEEIRQQM 203


>ref|XP_003529306.1| PREDICTED: mitochondrial inner membrane protein OXA1-like [Glycine
           max]
          Length = 431

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/75 (77%), Positives = 65/75 (86%)
 Frame = -2

Query: 225 SEVAIAAADSYFPVAALQYIIDGVHSFTGLNWWASIVLTTFMIRGCTVPLLINQLKASSK 46
           +EVAIAAADS+ PV ALQY+ID VHS+TGLNWWA+IVLTT +IR  TVPLLINQLKA+SK
Sbjct: 123 NEVAIAAADSFLPVQALQYVIDAVHSYTGLNWWAAIVLTTLLIRTATVPLLINQLKATSK 182

Query: 45  LAKMRPELEEIKDQM 1
           L  MRP LEEIK QM
Sbjct: 183 LTLMRPHLEEIKQQM 197


>ref|XP_002880242.1| hypothetical protein ARALYDRAFT_483801 [Arabidopsis lyrata subsp.
           lyrata] gi|297326081|gb|EFH56501.1| hypothetical protein
           ARALYDRAFT_483801 [Arabidopsis lyrata subsp. lyrata]
          Length = 434

 Score =  116 bits (290), Expect = 2e-24
 Identities = 54/75 (72%), Positives = 67/75 (89%)
 Frame = -2

Query: 225 SEVAIAAADSYFPVAALQYIIDGVHSFTGLNWWASIVLTTFMIRGCTVPLLINQLKASSK 46
           +EVAIAAADS FPVAALQ++IDGVHSFTGLNWWASI LTT +IRG T+P+L+NQLKA+ K
Sbjct: 126 NEVAIAAADSAFPVAALQHLIDGVHSFTGLNWWASIALTTVLIRGVTIPILLNQLKATYK 185

Query: 45  LAKMRPELEEIKDQM 1
           L  +RP+LEE++ +M
Sbjct: 186 LNVLRPQLEELRQEM 200


>ref|XP_003542770.1| PREDICTED: mitochondrial inner membrane protein OXA1-like [Glycine
           max]
          Length = 431

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/75 (74%), Positives = 64/75 (85%)
 Frame = -2

Query: 225 SEVAIAAADSYFPVAALQYIIDGVHSFTGLNWWASIVLTTFMIRGCTVPLLINQLKASSK 46
           +EVAIAAADS+ PV ALQY+ID VH +TGLNWWA+IVLTT +IR  TVPLLINQLKA+SK
Sbjct: 123 NEVAIAAADSFLPVQALQYVIDAVHFYTGLNWWAAIVLTTLLIRTATVPLLINQLKATSK 182

Query: 45  LAKMRPELEEIKDQM 1
           L  MRP LEEIK +M
Sbjct: 183 LTLMRPHLEEIKQEM 197


>ref|XP_002308102.1| inner membrane protein [Populus trichocarpa]
           gi|222854078|gb|EEE91625.1| inner membrane protein
           [Populus trichocarpa]
          Length = 427

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/75 (70%), Positives = 66/75 (88%)
 Frame = -2

Query: 225 SEVAIAAADSYFPVAALQYIIDGVHSFTGLNWWASIVLTTFMIRGCTVPLLINQLKASSK 46
           +EVAIAAADSY PVAALQY+ID VH+FTGLNWWAS+V+TT +IR   +PLLINQLKA+SK
Sbjct: 111 NEVAIAAADSYLPVAALQYVIDAVHNFTGLNWWASMVVTTLLIRSAMLPLLINQLKATSK 170

Query: 45  LAKMRPELEEIKDQM 1
           L+ +RP LEE+K ++
Sbjct: 171 LSILRPHLEEVKQRV 185


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