BLASTX nr result

ID: Coptis24_contig00020918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020918
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314295.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002273853.2| PREDICTED: uncharacterized protein LOC100258...   117   1e-24
emb|CBI17170.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|NP_001241314.1| uncharacterized protein LOC100779715 [Glycin...   112   2e-23
ref|XP_002523690.1| conserved hypothetical protein [Ricinus comm...   112   4e-23

>ref|XP_002314295.1| predicted protein [Populus trichocarpa] gi|222850703|gb|EEE88250.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/74 (74%), Positives = 62/74 (83%)
 Frame = +3

Query: 60  LVRTTKASEKSNAEQPMRDCEDCGGSGICSECRGEGFVLKRMSDEKAEKARLTASNMATR 239
           LVR  K SE    E P++ CEDCGGSGICSEC GEGFVLK++S+E AE+ARL+A NMATR
Sbjct: 74  LVRRNKPSEAD--EIPLKTCEDCGGSGICSECSGEGFVLKKLSEESAERARLSAKNMATR 131

Query: 240 YTAGLPKKWSYCTK 281
           YTAGLPKKWSYCTK
Sbjct: 132 YTAGLPKKWSYCTK 145


>ref|XP_002273853.2| PREDICTED: uncharacterized protein LOC100258439 [Vitis vinifera]
          Length = 176

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/74 (74%), Positives = 63/74 (85%)
 Frame = +3

Query: 60  LVRTTKASEKSNAEQPMRDCEDCGGSGICSECRGEGFVLKRMSDEKAEKARLTASNMATR 239
           LVR ++ SE +  E P++ CEDCGGSGICSEC GEGFVLK++S+  AEKARLTA NMATR
Sbjct: 87  LVRRSRPSEAT--EIPLKICEDCGGSGICSECNGEGFVLKKLSEASAEKARLTAKNMATR 144

Query: 240 YTAGLPKKWSYCTK 281
           YTAGLPKKWSYCTK
Sbjct: 145 YTAGLPKKWSYCTK 158


>emb|CBI17170.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/74 (74%), Positives = 63/74 (85%)
 Frame = +3

Query: 60   LVRTTKASEKSNAEQPMRDCEDCGGSGICSECRGEGFVLKRMSDEKAEKARLTASNMATR 239
            LVR ++ SE +  E P++ CEDCGGSGICSEC GEGFVLK++S+  AEKARLTA NMATR
Sbjct: 838  LVRRSRPSEAT--EIPLKICEDCGGSGICSECNGEGFVLKKLSEASAEKARLTAKNMATR 895

Query: 240  YTAGLPKKWSYCTK 281
            YTAGLPKKWSYCTK
Sbjct: 896  YTAGLPKKWSYCTK 909


>ref|NP_001241314.1| uncharacterized protein LOC100779715 [Glycine max]
           gi|255640844|gb|ACU20705.1| unknown [Glycine max]
          Length = 148

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/74 (70%), Positives = 61/74 (82%)
 Frame = +3

Query: 60  LVRTTKASEKSNAEQPMRDCEDCGGSGICSECRGEGFVLKRMSDEKAEKARLTASNMATR 239
           LV+ +K SE S  +   + CEDCGGSGICSEC+GEGFVL++ SDE AEKAR+ A NMATR
Sbjct: 59  LVKRSKTSESSQIQ--FKACEDCGGSGICSECKGEGFVLRKRSDESAEKARVQAKNMATR 116

Query: 240 YTAGLPKKWSYCTK 281
           +TAGLPKKWSYCTK
Sbjct: 117 FTAGLPKKWSYCTK 130


>ref|XP_002523690.1| conserved hypothetical protein [Ricinus communis]
           gi|223536994|gb|EEF38630.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 213

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/74 (68%), Positives = 62/74 (83%)
 Frame = +3

Query: 60  LVRTTKASEKSNAEQPMRDCEDCGGSGICSECRGEGFVLKRMSDEKAEKARLTASNMATR 239
           LVR TKA+E +  +  ++ CEDC GSG+CSEC+GEGFVLK++S+E AE+ARL A NMATR
Sbjct: 124 LVRRTKATETNEIQ--LKTCEDCEGSGLCSECKGEGFVLKKLSEESAERARLNAKNMATR 181

Query: 240 YTAGLPKKWSYCTK 281
           YTA LPKKWSYCTK
Sbjct: 182 YTAALPKKWSYCTK 195


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