BLASTX nr result
ID: Coptis24_contig00020917
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020917 (299 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi... 171 6e-41 emb|CBI18974.3| unnamed protein product [Vitis vinifera] 171 6e-41 ref|XP_002520317.1| pentatricopeptide repeat-containing protein,... 162 3e-38 ref|XP_002307458.1| predicted protein [Populus trichocarpa] gi|2... 160 1e-37 ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containi... 155 2e-36 >ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Vitis vinifera] Length = 476 Score = 171 bits (433), Expect = 6e-41 Identities = 82/99 (82%), Positives = 88/99 (88%) Frame = -2 Query: 298 LDEMDKKGIPSNSRTCNVILNSLISRGDTDEAFTVFRRMIKICEPDVDTYTMMIKMFCEI 119 L+EMD KGI NSRTCN+ILNSLIS GDTDEAF VFRRMIK+C+PD DTYTMMIKMFCE Sbjct: 308 LNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKVCDPDADTYTMMIKMFCEN 367 Query: 118 DKLEMALKVWKYMSLKRFVPSMHTFSVLINGLCAKGEVT 2 DKLEMALKVWKYM LK+FVPSMHTFSVLINGLC KG + Sbjct: 368 DKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNAS 406 >emb|CBI18974.3| unnamed protein product [Vitis vinifera] Length = 324 Score = 171 bits (433), Expect = 6e-41 Identities = 82/99 (82%), Positives = 88/99 (88%) Frame = -2 Query: 298 LDEMDKKGIPSNSRTCNVILNSLISRGDTDEAFTVFRRMIKICEPDVDTYTMMIKMFCEI 119 L+EMD KGI NSRTCN+ILNSLIS GDTDEAF VFRRMIK+C+PD DTYTMMIKMFCE Sbjct: 156 LNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKVCDPDADTYTMMIKMFCEN 215 Query: 118 DKLEMALKVWKYMSLKRFVPSMHTFSVLINGLCAKGEVT 2 DKLEMALKVWKYM LK+FVPSMHTFSVLINGLC KG + Sbjct: 216 DKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNAS 254 >ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 439 Score = 162 bits (410), Expect = 3e-38 Identities = 76/99 (76%), Positives = 88/99 (88%) Frame = -2 Query: 298 LDEMDKKGIPSNSRTCNVILNSLISRGDTDEAFTVFRRMIKICEPDVDTYTMMIKMFCEI 119 L+EMD KG+ NSRT N+ILN+LI+RG+TDEAF VFRRMIK+CEPD DTYTMMIKMFCE Sbjct: 287 LNEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRMIKVCEPDADTYTMMIKMFCER 346 Query: 118 DKLEMALKVWKYMSLKRFVPSMHTFSVLINGLCAKGEVT 2 ++LEMALKVWKYM K FVPSMHTFSVLINGLC +G+V+ Sbjct: 347 NELEMALKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVS 385 >ref|XP_002307458.1| predicted protein [Populus trichocarpa] gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa] Length = 440 Score = 160 bits (404), Expect = 1e-37 Identities = 75/99 (75%), Positives = 86/99 (86%) Frame = -2 Query: 298 LDEMDKKGIPSNSRTCNVILNSLISRGDTDEAFTVFRRMIKICEPDVDTYTMMIKMFCEI 119 L+EMD KG+ NSRT N+IL+SLI RG+TDEA+ VF RMIK+CEPD DTYTMMIKMFCE Sbjct: 287 LNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIKVCEPDADTYTMMIKMFCER 346 Query: 118 DKLEMALKVWKYMSLKRFVPSMHTFSVLINGLCAKGEVT 2 D+L+ ALKVWKYM LKRF+PSMHTF VLINGLC KG+VT Sbjct: 347 DELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVT 385 >ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucumis sativus] gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucumis sativus] Length = 439 Score = 155 bits (393), Expect = 2e-36 Identities = 71/99 (71%), Positives = 84/99 (84%) Frame = -2 Query: 298 LDEMDKKGIPSNSRTCNVILNSLISRGDTDEAFTVFRRMIKICEPDVDTYTMMIKMFCEI 119 L +MD KG+ NSRTCN+I+NSLI RG+TDEAF +FRRMIK+CEPDVD+YTM+IKMFC Sbjct: 287 LKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIKVCEPDVDSYTMIIKMFCGR 346 Query: 118 DKLEMALKVWKYMSLKRFVPSMHTFSVLINGLCAKGEVT 2 +L+MALK+WKYM K+FVPSMHTFSVLINGLC G T Sbjct: 347 KELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNAT 385