BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020917
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containi...   171   6e-41
emb|CBI18974.3| unnamed protein product [Vitis vinifera]              171   6e-41
ref|XP_002520317.1| pentatricopeptide repeat-containing protein,...   162   3e-38
ref|XP_002307458.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-36

>ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Vitis vinifera]
          Length = 476

 Score =  171 bits (433), Expect = 6e-41
 Identities = 82/99 (82%), Positives = 88/99 (88%)
 Frame = -2

Query: 298 LDEMDKKGIPSNSRTCNVILNSLISRGDTDEAFTVFRRMIKICEPDVDTYTMMIKMFCEI 119
           L+EMD KGI  NSRTCN+ILNSLIS GDTDEAF VFRRMIK+C+PD DTYTMMIKMFCE 
Sbjct: 308 LNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKVCDPDADTYTMMIKMFCEN 367

Query: 118 DKLEMALKVWKYMSLKRFVPSMHTFSVLINGLCAKGEVT 2
           DKLEMALKVWKYM LK+FVPSMHTFSVLINGLC KG  +
Sbjct: 368 DKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNAS 406


>emb|CBI18974.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  171 bits (433), Expect = 6e-41
 Identities = 82/99 (82%), Positives = 88/99 (88%)
 Frame = -2

Query: 298 LDEMDKKGIPSNSRTCNVILNSLISRGDTDEAFTVFRRMIKICEPDVDTYTMMIKMFCEI 119
           L+EMD KGI  NSRTCN+ILNSLIS GDTDEAF VFRRMIK+C+PD DTYTMMIKMFCE 
Sbjct: 156 LNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKVCDPDADTYTMMIKMFCEN 215

Query: 118 DKLEMALKVWKYMSLKRFVPSMHTFSVLINGLCAKGEVT 2
           DKLEMALKVWKYM LK+FVPSMHTFSVLINGLC KG  +
Sbjct: 216 DKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNAS 254


>ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540536|gb|EEF42103.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 439

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/99 (76%), Positives = 88/99 (88%)
 Frame = -2

Query: 298 LDEMDKKGIPSNSRTCNVILNSLISRGDTDEAFTVFRRMIKICEPDVDTYTMMIKMFCEI 119
           L+EMD KG+  NSRT N+ILN+LI+RG+TDEAF VFRRMIK+CEPD DTYTMMIKMFCE 
Sbjct: 287 LNEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRMIKVCEPDADTYTMMIKMFCER 346

Query: 118 DKLEMALKVWKYMSLKRFVPSMHTFSVLINGLCAKGEVT 2
           ++LEMALKVWKYM  K FVPSMHTFSVLINGLC +G+V+
Sbjct: 347 NELEMALKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVS 385


>ref|XP_002307458.1| predicted protein [Populus trichocarpa] gi|222856907|gb|EEE94454.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score =  160 bits (404), Expect = 1e-37
 Identities = 75/99 (75%), Positives = 86/99 (86%)
 Frame = -2

Query: 298 LDEMDKKGIPSNSRTCNVILNSLISRGDTDEAFTVFRRMIKICEPDVDTYTMMIKMFCEI 119
           L+EMD KG+  NSRT N+IL+SLI RG+TDEA+ VF RMIK+CEPD DTYTMMIKMFCE 
Sbjct: 287 LNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIKVCEPDADTYTMMIKMFCER 346

Query: 118 DKLEMALKVWKYMSLKRFVPSMHTFSVLINGLCAKGEVT 2
           D+L+ ALKVWKYM LKRF+PSMHTF VLINGLC KG+VT
Sbjct: 347 DELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVT 385


>ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
           gi|449499065|ref|XP_004160711.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Cucumis sativus]
          Length = 439

 Score =  155 bits (393), Expect = 2e-36
 Identities = 71/99 (71%), Positives = 84/99 (84%)
 Frame = -2

Query: 298 LDEMDKKGIPSNSRTCNVILNSLISRGDTDEAFTVFRRMIKICEPDVDTYTMMIKMFCEI 119
           L +MD KG+  NSRTCN+I+NSLI RG+TDEAF +FRRMIK+CEPDVD+YTM+IKMFC  
Sbjct: 287 LKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIKVCEPDVDSYTMIIKMFCGR 346

Query: 118 DKLEMALKVWKYMSLKRFVPSMHTFSVLINGLCAKGEVT 2
            +L+MALK+WKYM  K+FVPSMHTFSVLINGLC  G  T
Sbjct: 347 KELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNAT 385