BLASTX nr result

ID: Coptis24_contig00020913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020913
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60108.1| hypothetical protein VITISV_044328 [Vitis vinifera]   198   2e-48
emb|CBI30404.3| unnamed protein product [Vitis vinifera]              196   1e-47
ref|XP_002322974.1| predicted protein [Populus trichocarpa] gi|2...   185   2e-44
ref|XP_002308216.1| predicted protein [Populus trichocarpa] gi|2...   183   6e-44
ref|XP_002314109.1| predicted protein [Populus trichocarpa] gi|2...   179   1e-42

>emb|CAN60108.1| hypothetical protein VITISV_044328 [Vitis vinifera]
          Length = 430

 Score =  198 bits (504), Expect = 2e-48
 Identities = 125/325 (38%), Positives = 160/325 (49%), Gaps = 49/325 (15%)
 Frame = +1

Query: 307  QANVDNSEALTDTRYESKTVRVRFQLQKECVFGEQFFLVGDDPIIGLWDPESAIPLDWSK 486
            QA ++ +E     +  S TV VR QLQK C +GEQF +VGDDP+ GLWDP SA+PL WS 
Sbjct: 40   QAELETAETKIQKKSRSNTVHVRLQLQKRCSYGEQFLIVGDDPMFGLWDPSSAVPLCWSD 99

Query: 487  EHVWTVELDLPTGKPVLYKFVLKGTTEEVYWQPGPDRILQTWDTKNTILVLEDWENAENQ 666
             HVWT ELD+P GK + +KF+LKG T  + WQPGPDRIL+TW T+NTI V+EDWE+AE Q
Sbjct: 100  GHVWTAELDIPIGKLIQFKFILKGJTGTILWQPGPDRILRTWATENTITVVEDWEDAELQ 159

Query: 667  KITEDPSKDIGLN-VSGNDSYPKGEPVVNTDVDTITEN--------TTAYVIEESKAEVV 819
            KITE P   +    V  +D+    E V  T    +++         TTA+  E+  AE  
Sbjct: 160  KITEGPVSILNEEPVINSDTLIAAEDVTXTKXAHJSDXNKESAITVTTAHPSEKPPAEAQ 219

Query: 820  RE------------------------KKDEPLAKLKE----------------ESLVAEN 879
             +                         K+EPLA   E                + L+A N
Sbjct: 220  NKLTVADNIPKSQEKLMAMVAENIIYPKEEPLANANEVLRTKTAXSPEATSEKDVLMAGN 279

Query: 880  ILKRNSIVDTDKKPATIHDEECWVAYVGEPVLVPGLTSLPNITTXXXXXXXXXXXXXXDA 1059
             L  N      K P +   +E  + Y G PVLVPGLT L  I T              DA
Sbjct: 280  NLADNGRAXPIKNPGSAEIKENLITYEG-PVLVPGLTPLSTIPTEETIQDGDKRSISMDA 338

Query: 1060 SKEADQVQGLGEPEKPEKQEVSSIP 1134
            S  A + +    PE  +KQE    P
Sbjct: 339  SVGAMEAKDQTVPESDDKQEPEGEP 363


>emb|CBI30404.3| unnamed protein product [Vitis vinifera]
          Length = 382

 Score =  196 bits (497), Expect = 1e-47
 Identities = 118/293 (40%), Positives = 155/293 (52%), Gaps = 13/293 (4%)
 Frame = +1

Query: 307  QANVDNSEALTDTRYESKTVRVRFQLQKECVFGEQFFLVGDDPIIGLWDPESAIPLDWSK 486
            QA ++ +E     +  S TV VR QLQK C +GEQF +VGDDP+ GLWDP SA+PL WS 
Sbjct: 64   QAELETAETKIQKKSRSNTVHVRLQLQKRCSYGEQFLIVGDDPMFGLWDPSSAVPLCWSD 123

Query: 487  EHVWTVELDLPTGKPVLYKFVLKGTTEEVYWQPGPDRILQTWDTKNTILVLEDWENAENQ 666
             HVWT ELD+P GK + +KF+LKG T  + WQPGPDRIL+TW T+NTI V+EDWE+AE Q
Sbjct: 124  GHVWTAELDIPIGKLIQFKFILKGITGTILWQPGPDRILRTWATENTITVVEDWEDAELQ 183

Query: 667  KITEDPSKDIGLNVSGNDSYPKGEPVVNTD----VDTITENTTAYVIEESKAEVVREKKD 834
            KITE P            S    EPV+N+D     + +T    A++ + +K   +     
Sbjct: 184  KITEGPV-----------SILNEEPVINSDTLIAAEDVTRTKYAHLSDINKESAITVTTA 232

Query: 835  EPLAKLKEESLVAENILKRNSIVDTDKKPATIHDEECWVAYVGEPVLVPGLTSLPNITTX 1014
             P  K   E   A+N L           P +   +E  + Y G PVLVPGLT L  I T 
Sbjct: 233  HPSEKPPAE---AQNKL---------TNPGSAEIKENLITYEG-PVLVPGLTPLSTIPTE 279

Query: 1015 XXXXXXXXXXXXXDASKEADQVQGLGEPE---------KPEKQEVSSIPAQKE 1146
                         DAS + D+ +  GEP            EK+E+     ++E
Sbjct: 280  ETIQDGDKRSISMDASSD-DKQEPEGEPHHEGTTEMVFNDEKEELQDAELEQE 331


>ref|XP_002322974.1| predicted protein [Populus trichocarpa] gi|222867604|gb|EEF04735.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  185 bits (469), Expect = 2e-44
 Identities = 99/197 (50%), Positives = 128/197 (64%), Gaps = 10/197 (5%)
 Frame = +1

Query: 322 NSEALTDTRYESKTVRVRFQLQKECVFGEQFFLVGDDPIIGLWDPESAIPLDWSKEHVWT 501
           N   L+ +  +SKTV V+FQL+KEC FGEQF +VGDDP++GLWDPES IPL+WS  H+WT
Sbjct: 84  NKTCLSLSADDSKTVHVKFQLRKECSFGEQFTIVGDDPLLGLWDPESGIPLNWSDGHLWT 143

Query: 502 VELDLPTGKPVLYKFVLKGTTEEVYWQPGPDRILQTWDTKNTILVLEDWENAENQKITED 681
           VE+D+P GK + +KF+LKG  E+++WQPGPDRIL TW+T NTI+V EDWE+A  QKITE+
Sbjct: 144 VEMDIPVGKSIQFKFILKGIAEKIFWQPGPDRILPTWETSNTIVVWEDWEDAALQKITEE 203

Query: 682 PSKDIGLNVSGNDSYPKGEPVVNTDVDTITENTTA----YVIEESKAEVV------REKK 831
                    S N S    EPVVN +   + EN T      V + S   V        EKK
Sbjct: 204 -------EPSANGS---EEPVVNPESLIVAENLTCQKEEVVSDMSNGAVTVDVSSNPEKK 253

Query: 832 DEPLAKLKEESLVAENI 882
             P+   K  ++VA+NI
Sbjct: 254 PSPVTCKK--AIVADNI 268


>ref|XP_002308216.1| predicted protein [Populus trichocarpa] gi|222854192|gb|EEE91739.1|
            predicted protein [Populus trichocarpa]
          Length = 421

 Score =  183 bits (465), Expect = 6e-44
 Identities = 117/319 (36%), Positives = 155/319 (48%), Gaps = 52/319 (16%)
 Frame = +1

Query: 352  ESKTVRVRFQLQKECVFGEQFFLVGDDPIIGLWDPESAIPLDWSKEHVWTVELDLPTGKP 531
            ESKTVRV+FQLQKEC FGEQF +VGDDP++GLWDP S IPL+WS EH+WTVELDLP GK 
Sbjct: 26   ESKTVRVKFQLQKECSFGEQFTIVGDDPLLGLWDPGSVIPLNWSDEHLWTVELDLPVGKS 85

Query: 532  VLYKFVLKGTTEEVYWQPGPDRILQTWDTKNTILVLEDWENAENQKITEDPSKDIGLNVS 711
              +KF+LKG    + WQPGPDR+LQT +T NTI+V EDWE+A  QK+TE+     G    
Sbjct: 86   FQFKFILKGIGGGICWQPGPDRVLQTRETDNTIVVWEDWEDAALQKVTEEEPSANGTE-- 143

Query: 712  GNDSYPKGEPVVNTDVDTITENTT----AYVIEESKAEVVREKKDEPLAK----LKEESL 867
                    EP VN ++  +TEN T      V + S   V       P  K      E+ +
Sbjct: 144  --------EPSVNPEMLIVTENLTHQKEELVSDASNGGVTMNVSSNPAKKPTPVTYEKRI 195

Query: 868  VAENI---------------------------------------LKRNSIVDTDKKPATI 930
            VA+NI                                       + R  +V  D  P  I
Sbjct: 196  VADNISPMQEKPVAIVADNIRYSEGASAVNEVLVEKRTKSNKSTVIREDVVRNDDAPTAI 255

Query: 931  HDEEC-----WVAYVGEPVLVPGLTSLPNITTXXXXXXXXXXXXXXDASKEADQVQGLGE 1095
            +  +       V + G+PVLVP L+++  +                 AS   D+V+    
Sbjct: 256  NSSKSDVGGSVVTHEGDPVLVPDLSAVSVLPNEAANDNEGERSRAFHASVGVDEVENHNF 315

Query: 1096 PEKPEKQEVSSIPAQKEIV 1152
             +  EK E+     ++E V
Sbjct: 316  LQFDEKHEIGDKSLREETV 334


>ref|XP_002314109.1| predicted protein [Populus trichocarpa] gi|222850517|gb|EEE88064.1|
            predicted protein [Populus trichocarpa]
          Length = 324

 Score =  179 bits (454), Expect = 1e-42
 Identities = 101/236 (42%), Positives = 138/236 (58%), Gaps = 21/236 (8%)
 Frame = +1

Query: 358  KTVRVRFQLQKECVFGEQFFLVGDDPIIGLWDPESAIPLDWSKEHVWTVELDLPTGKPVL 537
            KTV V+FQLQKEC+FGEQF LVG+DP+IGLWDP +AIPLDWS+ H W+VELD+     + 
Sbjct: 90   KTVHVKFQLQKECMFGEQFLLVGEDPMIGLWDPSNAIPLDWSEGHTWSVELDVRIYLTMQ 149

Query: 538  YKFVLKGTTEEVYWQPGPDRILQTWDTKNTILVLEDWENAENQKITEDP---SKDIGLNV 708
            YKF+LK +T E+ WQPGPDRI +TW++ +++++ EDWENA  QKI E+    + D+    
Sbjct: 150  YKFILKRSTGEIVWQPGPDRIFKTWESSSSVVIAEDWENAGAQKIMEEQVINTPDLEPVG 209

Query: 709  SGNDSYPKGEPVVNTDVDTITENTTAYVIEES--KAEVV----------------REKKD 834
            +GN S   GE + + + D +     A   ++S  K EVV                + +  
Sbjct: 210  AGNVSLQGGEVMSDVNKDLMLSGHIACAEDKSNGKYEVVNGIAYPAEGHIINADIKLESG 269

Query: 835  EPLAKLKEESLVAENILKRNSIVDTDKKPATIHDEECWVAYVGEPVLVPGLTSLPN 1002
            E     KE  + A+   K N    T K P T+ DEE  +      VLVPGL S P+
Sbjct: 270  ESFGSRKEVPVPAD---KNNCTTPTCKNPETMEDEETLLTNEQRTVLVPGLKSFPS 322


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