BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020906
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   135   4e-30
emb|CBI15349.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ...   108   3e-22
ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase H...    92   4e-17
ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...    91   1e-16

>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Vitis vinifera]
          Length = 1231

 Score =  135 bits (339), Expect = 4e-30
 Identities = 82/191 (42%), Positives = 116/191 (60%), Gaps = 25/191 (13%)
 Frame = -2

Query: 499 LGVFGLDLCIEDVKQLSVLCPKIVRIGTYEN------------------------VPIK- 395
           LG FG  + +ED++ LSVLCPK+V I  Y++                        +P + 
Sbjct: 261 LGEFGFQVDMEDIEHLSVLCPKLVEICVYDDFLSGYVILISAWFCLKVVHFATNGMPSRN 320

Query: 394 LGDAIVIVDSSKDVGGQSDSVNNVRTVRKQISTSTIVNAIKKREAGFKEHLWWAVRDSMA 215
           LGD +++++SS     Q +  +N RT +KQ+  S IV+ +KK E+ FK HLW AV+  M 
Sbjct: 321 LGDNLIVINSSTQHKDQVE--DNSRTAQKQVPISKIVSVMKKLESCFKTHLWRAVKVLM- 377

Query: 214 KRKSGNRMNLLPSLEDLIVSIKYGNSATTCGEAKRARTGSTAVSNSLSGQKRCHDMKPLL 35
            RK+GN M +L SLEDL++S+K G +    G+AK+AR   +AVS++ S Q +CHD  PLL
Sbjct: 378 -RKNGNEMAMLFSLEDLLISVKEGGA----GKAKQARRSWSAVSSTNSAQSKCHDTNPLL 432

Query: 34  PAEMVEHLRKG 2
           P EMVEHLRKG
Sbjct: 433 PMEMVEHLRKG 443


>emb|CBI15349.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score =  120 bits (302), Expect = 9e-26
 Identities = 74/171 (43%), Positives = 102/171 (59%)
 Frame = -2

Query: 514 GAMKKLGVFGLDLCIEDVKQLSVLCPKIVRIGTYENVPIKLGDAIVIVDSSKDVGGQSDS 335
           G+   LG FG  + +ED++ LSVLCPK++             D I      + V   S +
Sbjct: 232 GSKNHLGEFGFQVDMEDIEHLSVLCPKVI-------------DCISEKFVHEWVISFSFT 278

Query: 334 VNNVRTVRKQISTSTIVNAIKKREAGFKEHLWWAVRDSMAKRKSGNRMNLLPSLEDLIVS 155
           +      +KQ+  S IV+ +KK E+ FK HLW AV+  M  RK+GN M +L SLEDL++S
Sbjct: 279 LGLCSIAQKQVPISKIVSVMKKLESCFKTHLWRAVKVLM--RKNGNEMAMLFSLEDLLIS 336

Query: 154 IKYGNSATTCGEAKRARTGSTAVSNSLSGQKRCHDMKPLLPAEMVEHLRKG 2
           +K G +    G+AK+AR   +AVS++ S Q +CHD  PLLP EMVEHLRKG
Sbjct: 337 VKEGGA----GKAKQARRSWSAVSSTNSAQSKCHDTNPLLPMEMVEHLRKG 383


>ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 1189

 Score =  108 bits (271), Expect = 3e-22
 Identities = 63/169 (37%), Positives = 95/169 (56%)
 Frame = -2

Query: 508 MKKLGVFGLDLCIEDVKQLSVLCPKIVRIGTYENVPIKLGDAIVIVDSSKDVGGQSDSVN 329
           +K+LG FG +   ED++ +S+LCPK+V         +   DA+VI++S  +     D   
Sbjct: 241 LKQLGRFGFNAGFEDIEHISILCPKVVSFANNSTEFVNSADALVIINSELE---DRDEFV 297

Query: 328 NVRTVRKQISTSTIVNAIKKREAGFKEHLWWAVRDSMAKRKSGNRMNLLPSLEDLIVSIK 149
                +K +S S I   ++KRE+ FK HLW A R  M+K  SGN + +L SLEDL+  +K
Sbjct: 298 IPGNGQKAMSLSKIFTTMRKRESSFKSHLWEAARLLMSK--SGNAIAMLFSLEDLLNFVK 355

Query: 148 YGNSATTCGEAKRARTGSTAVSNSLSGQKRCHDMKPLLPAEMVEHLRKG 2
            G  +    EAKR     +++S   S +  CH+   L+P EMV+HLR+G
Sbjct: 356 GGGVSEKGNEAKRESGRLSSISRPYSFRTHCHETNHLVPVEMVQHLREG 404


>ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase HRQ1-like, partial
           [Cucumis sativus]
          Length = 489

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 61/161 (37%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
 Frame = -2

Query: 484 LDLCIEDVKQLSVLCPKIVRIGTYENVPIKLGDAIVIVDSSKDVGGQSDSVNNVRTVRKQ 305
           L  C+ED+  LS LCPK V   +      ++   I+I+  ++  G   + ++N       
Sbjct: 293 LMFCMEDIHNLSRLCPKAVHFASGRLEDTRVDKLIIIIYLTEKNGQPKEDIDN------- 345

Query: 304 ISTSTIVNAIKKREAGFKEHLWWAVRDSMAKRKSGNRMNLLPSLEDLIVSIKYGNSATTC 125
            + S  VN +K+RE  FK +LW A++  M K  SG  M +  SLE LI S    N     
Sbjct: 346 -TVSMDVNPLKRRERSFKLYLWEAIKCHMLKHGSGREMCVPFSLEALITS----NETDVD 400

Query: 124 G-EAKRARTGSTAVSNSLSGQKRCHDMKPLLPAEMVEHLRK 5
           G E KRA+   TA S+S S + RCHD   LLP +MVEHL K
Sbjct: 401 GSETKRAKKSDTASSSSQSDRIRCHDTLKLLPEDMVEHLGK 441


>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Cucumis sativus]
          Length = 1218

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 60/161 (37%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
 Frame = -2

Query: 484 LDLCIEDVKQLSVLCPKIVRIGTYENVPIKLGDAIVIVDSSKDVGGQSDSVNNVRTVRKQ 305
           L  C+ED+  LS LCPK V   +      ++   I+I+  ++  G   + ++N       
Sbjct: 293 LMFCMEDIHNLSRLCPKAVHFASGRLEDTRVDKLIIIIYLTEKNGRPKEDIDN------- 345

Query: 304 ISTSTIVNAIKKREAGFKEHLWWAVRDSMAKRKSGNRMNLLPSLEDLIVSIKYGNSATTC 125
            + S  VN +K+RE  FK +LW A++  M K  SG  M +  SLE +I S    N     
Sbjct: 346 -TVSMDVNPLKRRERSFKLYLWEAIKCHMLKHGSGREMCVPFSLEAVITS----NETDVD 400

Query: 124 G-EAKRARTGSTAVSNSLSGQKRCHDMKPLLPAEMVEHLRK 5
           G E KRA+   TA S+S S + RCHD   LLP +MVEHL K
Sbjct: 401 GSETKRAKKSDTASSSSQSDRIRCHDTLKLLPEDMVEHLGK 441