BLASTX nr result
ID: Coptis24_contig00020906
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020906 (515 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP... 135 4e-30 emb|CBI15349.3| unnamed protein product [Vitis vinifera] 120 9e-26 ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ... 108 3e-22 ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase H... 92 4e-17 ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP... 91 1e-16 >ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase HRQ1-like [Vitis vinifera] Length = 1231 Score = 135 bits (339), Expect = 4e-30 Identities = 82/191 (42%), Positives = 116/191 (60%), Gaps = 25/191 (13%) Frame = -2 Query: 499 LGVFGLDLCIEDVKQLSVLCPKIVRIGTYEN------------------------VPIK- 395 LG FG + +ED++ LSVLCPK+V I Y++ +P + Sbjct: 261 LGEFGFQVDMEDIEHLSVLCPKLVEICVYDDFLSGYVILISAWFCLKVVHFATNGMPSRN 320 Query: 394 LGDAIVIVDSSKDVGGQSDSVNNVRTVRKQISTSTIVNAIKKREAGFKEHLWWAVRDSMA 215 LGD +++++SS Q + +N RT +KQ+ S IV+ +KK E+ FK HLW AV+ M Sbjct: 321 LGDNLIVINSSTQHKDQVE--DNSRTAQKQVPISKIVSVMKKLESCFKTHLWRAVKVLM- 377 Query: 214 KRKSGNRMNLLPSLEDLIVSIKYGNSATTCGEAKRARTGSTAVSNSLSGQKRCHDMKPLL 35 RK+GN M +L SLEDL++S+K G + G+AK+AR +AVS++ S Q +CHD PLL Sbjct: 378 -RKNGNEMAMLFSLEDLLISVKEGGA----GKAKQARRSWSAVSSTNSAQSKCHDTNPLL 432 Query: 34 PAEMVEHLRKG 2 P EMVEHLRKG Sbjct: 433 PMEMVEHLRKG 443 >emb|CBI15349.3| unnamed protein product [Vitis vinifera] Length = 1188 Score = 120 bits (302), Expect = 9e-26 Identities = 74/171 (43%), Positives = 102/171 (59%) Frame = -2 Query: 514 GAMKKLGVFGLDLCIEDVKQLSVLCPKIVRIGTYENVPIKLGDAIVIVDSSKDVGGQSDS 335 G+ LG FG + +ED++ LSVLCPK++ D I + V S + Sbjct: 232 GSKNHLGEFGFQVDMEDIEHLSVLCPKVI-------------DCISEKFVHEWVISFSFT 278 Query: 334 VNNVRTVRKQISTSTIVNAIKKREAGFKEHLWWAVRDSMAKRKSGNRMNLLPSLEDLIVS 155 + +KQ+ S IV+ +KK E+ FK HLW AV+ M RK+GN M +L SLEDL++S Sbjct: 279 LGLCSIAQKQVPISKIVSVMKKLESCFKTHLWRAVKVLM--RKNGNEMAMLFSLEDLLIS 336 Query: 154 IKYGNSATTCGEAKRARTGSTAVSNSLSGQKRCHDMKPLLPAEMVEHLRKG 2 +K G + G+AK+AR +AVS++ S Q +CHD PLLP EMVEHLRKG Sbjct: 337 VKEGGA----GKAKQARRSWSAVSSTNSAQSKCHDTNPLLPMEMVEHLRKG 383 >ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 1189 Score = 108 bits (271), Expect = 3e-22 Identities = 63/169 (37%), Positives = 95/169 (56%) Frame = -2 Query: 508 MKKLGVFGLDLCIEDVKQLSVLCPKIVRIGTYENVPIKLGDAIVIVDSSKDVGGQSDSVN 329 +K+LG FG + ED++ +S+LCPK+V + DA+VI++S + D Sbjct: 241 LKQLGRFGFNAGFEDIEHISILCPKVVSFANNSTEFVNSADALVIINSELE---DRDEFV 297 Query: 328 NVRTVRKQISTSTIVNAIKKREAGFKEHLWWAVRDSMAKRKSGNRMNLLPSLEDLIVSIK 149 +K +S S I ++KRE+ FK HLW A R M+K SGN + +L SLEDL+ +K Sbjct: 298 IPGNGQKAMSLSKIFTTMRKRESSFKSHLWEAARLLMSK--SGNAIAMLFSLEDLLNFVK 355 Query: 148 YGNSATTCGEAKRARTGSTAVSNSLSGQKRCHDMKPLLPAEMVEHLRKG 2 G + EAKR +++S S + CH+ L+P EMV+HLR+G Sbjct: 356 GGGVSEKGNEAKRESGRLSSISRPYSFRTHCHETNHLVPVEMVQHLREG 404 >ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase HRQ1-like, partial [Cucumis sativus] Length = 489 Score = 92.0 bits (227), Expect = 4e-17 Identities = 61/161 (37%), Positives = 84/161 (52%), Gaps = 1/161 (0%) Frame = -2 Query: 484 LDLCIEDVKQLSVLCPKIVRIGTYENVPIKLGDAIVIVDSSKDVGGQSDSVNNVRTVRKQ 305 L C+ED+ LS LCPK V + ++ I+I+ ++ G + ++N Sbjct: 293 LMFCMEDIHNLSRLCPKAVHFASGRLEDTRVDKLIIIIYLTEKNGQPKEDIDN------- 345 Query: 304 ISTSTIVNAIKKREAGFKEHLWWAVRDSMAKRKSGNRMNLLPSLEDLIVSIKYGNSATTC 125 + S VN +K+RE FK +LW A++ M K SG M + SLE LI S N Sbjct: 346 -TVSMDVNPLKRRERSFKLYLWEAIKCHMLKHGSGREMCVPFSLEALITS----NETDVD 400 Query: 124 G-EAKRARTGSTAVSNSLSGQKRCHDMKPLLPAEMVEHLRK 5 G E KRA+ TA S+S S + RCHD LLP +MVEHL K Sbjct: 401 GSETKRAKKSDTASSSSQSDRIRCHDTLKLLPEDMVEHLGK 441 >ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase HRQ1-like [Cucumis sativus] Length = 1218 Score = 90.9 bits (224), Expect = 1e-16 Identities = 60/161 (37%), Positives = 84/161 (52%), Gaps = 1/161 (0%) Frame = -2 Query: 484 LDLCIEDVKQLSVLCPKIVRIGTYENVPIKLGDAIVIVDSSKDVGGQSDSVNNVRTVRKQ 305 L C+ED+ LS LCPK V + ++ I+I+ ++ G + ++N Sbjct: 293 LMFCMEDIHNLSRLCPKAVHFASGRLEDTRVDKLIIIIYLTEKNGRPKEDIDN------- 345 Query: 304 ISTSTIVNAIKKREAGFKEHLWWAVRDSMAKRKSGNRMNLLPSLEDLIVSIKYGNSATTC 125 + S VN +K+RE FK +LW A++ M K SG M + SLE +I S N Sbjct: 346 -TVSMDVNPLKRRERSFKLYLWEAIKCHMLKHGSGREMCVPFSLEAVITS----NETDVD 400 Query: 124 G-EAKRARTGSTAVSNSLSGQKRCHDMKPLLPAEMVEHLRK 5 G E KRA+ TA S+S S + RCHD LLP +MVEHL K Sbjct: 401 GSETKRAKKSDTASSSSQSDRIRCHDTLKLLPEDMVEHLGK 441