BLASTX nr result

ID: Coptis24_contig00020892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020892
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40348.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002272636.1| PREDICTED: uncharacterized protein LOC100244...    64   1e-08
ref|NP_001236776.1| uncharacterized protein LOC100306306 [Glycin...    61   1e-07
ref|XP_002511846.1| conserved hypothetical protein [Ricinus comm...    60   1e-07
ref|XP_002892046.1| hypothetical protein ARALYDRAFT_470101 [Arab...    55   5e-06

>emb|CBI40348.3| unnamed protein product [Vitis vinifera]
          Length = 185

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/53 (60%), Positives = 42/53 (79%)
 Frame = +1

Query: 175 KRKADNVVAAALHDNCYFKLRAIVKDLRPHFIEVLRTTDFRNSKAAHEIRKNM 333
           KR  D+ V+  + ++ YFK RA+VKDLRPHFIEVLR+ DFRN KAA+EIR+ +
Sbjct: 38  KRSLDSNVS--IQNSKYFKTRAVVKDLRPHFIEVLRSPDFRNCKAANEIREQL 88


>ref|XP_002272636.1| PREDICTED: uncharacterized protein LOC100244723 [Vitis vinifera]
          Length = 209

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/53 (60%), Positives = 42/53 (79%)
 Frame = +1

Query: 175 KRKADNVVAAALHDNCYFKLRAIVKDLRPHFIEVLRTTDFRNSKAAHEIRKNM 333
           KR  D+ V+  + ++ YFK RA+VKDLRPHFIEVLR+ DFRN KAA+EIR+ +
Sbjct: 38  KRSLDSNVS--IQNSKYFKTRAVVKDLRPHFIEVLRSPDFRNCKAANEIREQL 88


>ref|NP_001236776.1| uncharacterized protein LOC100306306 [Glycine max]
           gi|255628159|gb|ACU14424.1| unknown [Glycine max]
          Length = 190

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/41 (60%), Positives = 36/41 (87%)
 Frame = +1

Query: 211 HDNCYFKLRAIVKDLRPHFIEVLRTTDFRNSKAAHEIRKNM 333
           H N YFK+RA+++DLRPHF+EVLRT D++N KA+HEI++ +
Sbjct: 30  HSN-YFKIRAVIRDLRPHFLEVLRTPDYKNCKASHEIQEQL 69


>ref|XP_002511846.1| conserved hypothetical protein [Ricinus communis]
           gi|223549026|gb|EEF50515.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 246

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/55 (52%), Positives = 39/55 (70%)
 Frame = +1

Query: 169 NNKRKADNVVAAALHDNCYFKLRAIVKDLRPHFIEVLRTTDFRNSKAAHEIRKNM 333
           + KR  D+ V   L D  YFK+RA++KD+RPH +EVLRT DFRN K A E+R+ +
Sbjct: 84  SKKRPLDSNVQ--LQDCTYFKIRAVLKDIRPHLLEVLRTVDFRNCKGADELRQRL 136


>ref|XP_002892046.1| hypothetical protein ARALYDRAFT_470101 [Arabidopsis lyrata subsp.
           lyrata] gi|297337888|gb|EFH68305.1| hypothetical protein
           ARALYDRAFT_470101 [Arabidopsis lyrata subsp. lyrata]
          Length = 214

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = +1

Query: 223 YFKLRAIVKDLRPHFIEVLRTTDFRNSKAAHEIRKNM 333
           Y+K+R +VKDLRPH +EVLRT DF NSKAA EI++ M
Sbjct: 75  YYKMRLLVKDLRPHVLEVLRTPDFSNSKAAIEIQEKM 111


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