BLASTX nr result
ID: Coptis24_contig00020880
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020880 (448 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [S... 167 6e-40 gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays] 164 9e-39 ref|XP_003572610.1| PREDICTED: pentatricopeptide repeat-containi... 162 2e-38 ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi... 159 2e-37 emb|CBI31119.3| unnamed protein product [Vitis vinifera] 159 2e-37 >ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor] gi|241932087|gb|EES05232.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor] Length = 590 Score = 167 bits (424), Expect = 6e-40 Identities = 83/150 (55%), Positives = 109/150 (72%), Gaps = 3/150 (2%) Frame = +2 Query: 8 IVRNSIMKMYCNMGCLIEARLLFD--GSLNLDLISWNSMISAYGKSGQVELGRELFERMP 181 +V N ++K+YC +G L +AR +FD G+ LD++SWN+M+S YGK G +E RE+F RMP Sbjct: 117 VVTNCLLKLYCALGMLPDARRVFDTSGATALDVVSWNTMVSGYGKCGDLEAAREVFVRMP 176 Query: 182 MRSLVSWGAMIDGYVVSGGFSEALSLFDDMQVSGLKPDAMTLVSVLKASCNLGALDKGKW 361 R LVSW AMID V +G FSEAL +FD M +G KPDA+ LVSVLK +LGAL++G+W Sbjct: 177 ERGLVSWSAMIDACVRTGEFSEALRVFDQMTGNGFKPDAVVLVSVLKTCAHLGALERGRW 236 Query: 362 VHRYVDENKLGWEK-NVVLGTALVDMYAKC 448 VHR++ +LG NV+L TALVDMY KC Sbjct: 237 VHRFLKAERLGGRPGNVMLETALVDMYCKC 266 Score = 56.2 bits (134), Expect = 3e-06 Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 4/101 (3%) Frame = +2 Query: 2 NVIVRNSIMKMYCNMGCLIEARLLFDGSLNLDLISWNSMISAYGKSGQVELGRELFERMP 181 NV++ +++ MYC GC+ EA +FDG + D++ WN+MI +G + ELF RM Sbjct: 252 NVMLETALVDMYCKCGCMNEAWWVFDGVQSHDVVLWNAMIGGLAMNGHGKRALELFRRML 311 Query: 182 MRSLV----SWGAMIDGYVVSGGFSEALSLFDDMQVSGLKP 292 + V ++ + + +G E +F M+ G++P Sbjct: 312 DKGFVPNESTFVVALCACIHTGRVDEGEDVFRSMRDHGIEP 352 >gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays] Length = 625 Score = 164 bits (414), Expect = 9e-39 Identities = 81/150 (54%), Positives = 107/150 (71%), Gaps = 3/150 (2%) Frame = +2 Query: 8 IVRNSIMKMYCNMGCLIEARLLFD--GSLNLDLISWNSMISAYGKSGQVELGRELFERMP 181 +V N ++K+YC +G L +AR +FD G+ +LD SWN+M+S YGK G +E RE+F RMP Sbjct: 152 VVTNCLLKLYCALGMLSDARRVFDTSGATSLDAFSWNTMVSGYGKCGDLEAAREVFVRMP 211 Query: 182 MRSLVSWGAMIDGYVVSGGFSEALSLFDDMQVSGLKPDAMTLVSVLKASCNLGALDKGKW 361 R LVSW AMID + +G FSEAL +FD M +G +PDA+ L SVLKA +LGAL++G+W Sbjct: 212 ERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGFRPDAVVLSSVLKACAHLGALERGRW 271 Query: 362 VHRYVDENKLGWE-KNVVLGTALVDMYAKC 448 VHR++ LG NV+L TALVDMY KC Sbjct: 272 VHRFLKAEGLGRSPDNVMLETALVDMYCKC 301 >ref|XP_003572610.1| PREDICTED: pentatricopeptide repeat-containing protein At5g06540-like [Brachypodium distachyon] Length = 454 Score = 162 bits (411), Expect = 2e-38 Identities = 78/148 (52%), Positives = 105/148 (70%), Gaps = 1/148 (0%) Frame = +2 Query: 8 IVRNSIMKMYCNMGCLIEARLLFDGSLNLDLISWNSMISAYGKSGQVELGRELFERMPMR 187 +V NS++K+YC +G L AR +FD LD+ SWN+M+S YGKSG + RE+F RMP R Sbjct: 112 VVTNSLLKLYCTLGLLPHARRVFDSGAALDVASWNTMVSGYGKSGDLAAAREVFGRMPGR 171 Query: 188 SLVSWGAMIDGYVVSGGFSEALSLFDDMQVSGLKPDAMTLVSVLKASCNLGALDKGKWVH 367 +LVSW AMID V + F EALS+FD M G KPD + LVS+LKA +LGA+ +G+W H Sbjct: 172 NLVSWSAMIDALVHAEEFGEALSVFDQMMREGFKPDVVVLVSMLKACAHLGAVKRGRWAH 231 Query: 368 RYVD-ENKLGWEKNVVLGTALVDMYAKC 448 +Y++ E G ++NV++ TALVDMY KC Sbjct: 232 QYLETEGFAGRQRNVMVETALVDMYCKC 259 Score = 59.7 bits (143), Expect = 2e-07 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 4/101 (3%) Frame = +2 Query: 2 NVIVRNSIMKMYCNMGCLIEARLLFDGSLNLDLISWNSMISAYGKSGQVELGRELFERMP 181 NV+V +++ MYC GC+ EA +FDG D++ WNSMI +G + ELF+RM Sbjct: 245 NVMVETALVDMYCKCGCMEEAWCVFDGVRYRDVVLWNSMIGGLAMNGHGDRALELFQRML 304 Query: 182 MRSLV----SWGAMIDGYVVSGGFSEALSLFDDMQVSGLKP 292 V ++ + +G E +F M G++P Sbjct: 305 QEGFVPNQSTFAGALCACTHTGHVDEGREIFKSMWHHGIEP 345 >ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Vitis vinifera] Length = 537 Score = 159 bits (402), Expect = 2e-37 Identities = 72/146 (49%), Positives = 105/146 (71%) Frame = +2 Query: 11 VRNSIMKMYCNMGCLIEARLLFDGSLNLDLISWNSMISAYGKSGQVELGRELFERMPMRS 190 V+N ++ +Y + C+ AR LFDGS+N D+++W ++I+ Y KSGQV + R+LF+ MP ++ Sbjct: 150 VQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKN 209 Query: 191 LVSWGAMIDGYVVSGGFSEALSLFDDMQVSGLKPDAMTLVSVLKASCNLGALDKGKWVHR 370 VSW AMI GY G F EAL LF+DMQ++G +P+ +V L A LGALD+G+W+H Sbjct: 210 AVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHA 269 Query: 371 YVDENKLGWEKNVVLGTALVDMYAKC 448 YVD N++ ++ +LGTAL+DMYAKC Sbjct: 270 YVDRNRMVLDR--ILGTALIDMYAKC 293 >emb|CBI31119.3| unnamed protein product [Vitis vinifera] Length = 512 Score = 159 bits (402), Expect = 2e-37 Identities = 72/146 (49%), Positives = 105/146 (71%) Frame = +2 Query: 11 VRNSIMKMYCNMGCLIEARLLFDGSLNLDLISWNSMISAYGKSGQVELGRELFERMPMRS 190 V+N ++ +Y + C+ AR LFDGS+N D+++W ++I+ Y KSGQV + R+LF+ MP ++ Sbjct: 125 VQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKN 184 Query: 191 LVSWGAMIDGYVVSGGFSEALSLFDDMQVSGLKPDAMTLVSVLKASCNLGALDKGKWVHR 370 VSW AMI GY G F EAL LF+DMQ++G +P+ +V L A LGALD+G+W+H Sbjct: 185 AVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHA 244 Query: 371 YVDENKLGWEKNVVLGTALVDMYAKC 448 YVD N++ ++ +LGTAL+DMYAKC Sbjct: 245 YVDRNRMVLDR--ILGTALIDMYAKC 268