BLASTX nr result

ID: Coptis24_contig00020877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020877
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266327.1| PREDICTED: uncharacterized protein LOC100265...   146   2e-33
ref|XP_002266916.1| PREDICTED: uncharacterized protein LOC100242...   145   3e-33
emb|CAN62212.1| hypothetical protein VITISV_011167 [Vitis vinifera]   145   3e-33
ref|XP_002316430.1| SAUR family protein [Populus trichocarpa] gi...   138   4e-31
ref|XP_002513310.1| Indole-3-acetic acid-induced protein ARG7, p...   135   3e-30

>ref|XP_002266327.1| PREDICTED: uncharacterized protein LOC100265117 [Vitis vinifera]
          Length = 173

 Score =  146 bits (369), Expect = 2e-33
 Identities = 82/120 (68%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
 Frame = +3

Query: 39  MDSKKS-KISEIVKLQQILKKWRKLANVXXXXXXXXXXXXXXXXXHPCSNKSIKFLKKTL 215
           MDSKKS KISEIV+LQQILKKW+KLAN                  +  S KSIKFLKKTL
Sbjct: 1   MDSKKSNKISEIVRLQQILKKWKKLANAPRNSNKNGSHSSTSSSSNNGS-KSIKFLKKTL 59

Query: 216 SFSDNSVLASTSDIVPKGFLAVCVGKELKRFIIPMEYLGHRAFGILLQEAEEEFGFQNEG 395
           SF+D S + ST ++VPKGFLAVCVGKELKRFIIP EYLGH+AFG+LL+EAEEEFGFQ EG
Sbjct: 60  SFTDTSSMLST-EVVPKGFLAVCVGKELKRFIIPTEYLGHQAFGVLLREAEEEFGFQQEG 118


>ref|XP_002266916.1| PREDICTED: uncharacterized protein LOC100242742 [Vitis vinifera]
          Length = 177

 Score =  145 bits (366), Expect = 3e-33
 Identities = 81/120 (67%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
 Frame = +3

Query: 39  MDSKKS-KISEIVKLQQILKKWRKLANVXXXXXXXXXXXXXXXXXHPCSNKSIKFLKKTL 215
           MDSKKS KISEIV+LQQILKKW+KLAN                  +  S KSIKFLKKTL
Sbjct: 1   MDSKKSNKISEIVRLQQILKKWKKLANAPKNSNKNGSHSSTSSSSNNGS-KSIKFLKKTL 59

Query: 216 SFSDNSVLASTSDIVPKGFLAVCVGKELKRFIIPMEYLGHRAFGILLQEAEEEFGFQNEG 395
           SF+D + + ST ++VPKGFLAVCVGKELKRFIIP EYLGH+AFG+LL+EAEEEFGFQ EG
Sbjct: 60  SFTDTTSMLST-EVVPKGFLAVCVGKELKRFIIPTEYLGHQAFGVLLREAEEEFGFQQEG 118


>emb|CAN62212.1| hypothetical protein VITISV_011167 [Vitis vinifera]
          Length = 177

 Score =  145 bits (366), Expect = 3e-33
 Identities = 81/120 (67%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
 Frame = +3

Query: 39  MDSKKS-KISEIVKLQQILKKWRKLANVXXXXXXXXXXXXXXXXXHPCSNKSIKFLKKTL 215
           MDSKKS KISEIV+LQQILKKW+KLAN                  +  S KSIKFLKKTL
Sbjct: 1   MDSKKSNKISEIVRLQQILKKWKKLANAPKNSNKNGSHGSTSSSSNNGS-KSIKFLKKTL 59

Query: 216 SFSDNSVLASTSDIVPKGFLAVCVGKELKRFIIPMEYLGHRAFGILLQEAEEEFGFQNEG 395
           SF+D + + ST ++VPKGFLAVCVGKELKRFIIP EYLGH+AFG+LL+EAEEEFGFQ EG
Sbjct: 60  SFTDTTSMLST-EVVPKGFLAVCVGKELKRFIIPTEYLGHQAFGVLLREAEEEFGFQQEG 118


>ref|XP_002316430.1| SAUR family protein [Populus trichocarpa]
           gi|222865470|gb|EEF02601.1| SAUR family protein [Populus
           trichocarpa]
          Length = 185

 Score =  138 bits (348), Expect = 4e-31
 Identities = 74/118 (62%), Positives = 89/118 (75%), Gaps = 2/118 (1%)
 Frame = +3

Query: 48  KKSKISEIVKLQQILKKWRKLANVXXXXXXXXXXXXXXXXXHPCSNKSIKFLKKTLSFSD 227
           K +KIS+IV+LQQILKKWRK AN                  +  ++KSIKFLK+TLSF+D
Sbjct: 6   KSNKISDIVRLQQILKKWRKAANAPKNISSSSNNNSSSSSSN--ASKSIKFLKRTLSFTD 63

Query: 228 --NSVLASTSDIVPKGFLAVCVGKELKRFIIPMEYLGHRAFGILLQEAEEEFGFQNEG 395
             +S  AS++D VPKG+LAVCVGKELKR+IIP EYLGH+AFGILL+EAEEEFGFQ EG
Sbjct: 64  LSSSAAASSNDAVPKGYLAVCVGKELKRYIIPTEYLGHQAFGILLREAEEEFGFQQEG 121


>ref|XP_002513310.1| Indole-3-acetic acid-induced protein ARG7, putative [Ricinus
           communis] gi|223547218|gb|EEF48713.1| Indole-3-acetic
           acid-induced protein ARG7, putative [Ricinus communis]
          Length = 166

 Score =  135 bits (340), Expect = 3e-30
 Identities = 72/120 (60%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
 Frame = +3

Query: 39  MDSKKS-KISEIVKLQQILKKWRKLANVXXXXXXXXXXXXXXXXXHPCSNKSIKFLKKTL 215
           MDSKKS KIS+IV+LQQILKKW+K A                       +KSIKF+K+TL
Sbjct: 1   MDSKKSNKISDIVRLQQILKKWKKAATSAPKGSTSNSNAST-------GSKSIKFIKRTL 53

Query: 216 SFSDNSVLASTSDIVPKGFLAVCVGKELKRFIIPMEYLGHRAFGILLQEAEEEFGFQNEG 395
           SF+D S  AS  ++VPKGF+AVCVGKELKR++IP E+LGH+AFG+LL+EAEEEFGFQ EG
Sbjct: 54  SFTDVSAAASGDNVVPKGFVAVCVGKELKRYVIPTEHLGHQAFGVLLREAEEEFGFQQEG 113


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