BLASTX nr result

ID: Coptis24_contig00020871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020871
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299495.1| predicted protein [Populus trichocarpa] gi|2...   129   7e-28
ref|XP_002303623.1| predicted protein [Populus trichocarpa] gi|2...   121   2e-25
ref|XP_002267446.2| PREDICTED: probable inactive receptor kinase...   119   5e-25
emb|CBI22555.3| unnamed protein product [Vitis vinifera]              119   5e-25
ref|NP_194105.1| putative inactive receptor kinase [Arabidopsis ...   118   1e-24

>ref|XP_002299495.1| predicted protein [Populus trichocarpa] gi|222846753|gb|EEE84300.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  129 bits (324), Expect = 7e-28
 Identities = 60/80 (75%), Positives = 70/80 (87%)
 Frame = -3

Query: 241 VYSDPVEDKQALLEFVRDIPHSRALNWNESTKVCNTWTGVICNEDKTRIIALHLPGVGLN 62
           V SDPVEDKQALL+FV ++PHSR+LNWNES+ VCN WTGVIC+ D TR+IA+ LPGVG +
Sbjct: 20  VNSDPVEDKQALLDFVNNLPHSRSLNWNESSPVCNNWTGVICSGDGTRVIAVRLPGVGFH 79

Query: 61  GRIPPNTISRLSELQILSLR 2
           G IPPNT+SRLS LQILSLR
Sbjct: 80  GPIPPNTLSRLSALQILSLR 99


>ref|XP_002303623.1| predicted protein [Populus trichocarpa] gi|222841055|gb|EEE78602.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  121 bits (303), Expect = 2e-25
 Identities = 55/80 (68%), Positives = 68/80 (85%)
 Frame = -3

Query: 241 VYSDPVEDKQALLEFVRDIPHSRALNWNESTKVCNTWTGVICNEDKTRIIALHLPGVGLN 62
           V +DPVEDKQALL+FV  +PHSR+LNW ES+ VCN W+GVIC+ D TR+I++ LPGVG +
Sbjct: 20  VNADPVEDKQALLDFVHYLPHSRSLNWKESSPVCNNWSGVICSGDGTRVISVRLPGVGFH 79

Query: 61  GRIPPNTISRLSELQILSLR 2
           G IPPNT+SRLS LQ+LSLR
Sbjct: 80  GPIPPNTLSRLSALQVLSLR 99


>ref|XP_002267446.2| PREDICTED: probable inactive receptor kinase At4g23740-like [Vitis
           vinifera]
          Length = 656

 Score =  119 bits (299), Expect = 5e-25
 Identities = 52/79 (65%), Positives = 66/79 (83%)
 Frame = -3

Query: 238 YSDPVEDKQALLEFVRDIPHSRALNWNESTKVCNTWTGVICNEDKTRIIALHLPGVGLNG 59
           +++PVEDKQALL+F+ +I HSR LNWNE + VCNTWTGV C+ D +R+IALHLPG+G  G
Sbjct: 49  FAEPVEDKQALLDFLNNINHSRTLNWNEYSSVCNTWTGVTCSGDHSRVIALHLPGIGFRG 108

Query: 58  RIPPNTISRLSELQILSLR 2
            IPPNT+ +LS +QILSLR
Sbjct: 109 EIPPNTLGQLSAVQILSLR 127


>emb|CBI22555.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  119 bits (299), Expect = 5e-25
 Identities = 52/79 (65%), Positives = 66/79 (83%)
 Frame = -3

Query: 238 YSDPVEDKQALLEFVRDIPHSRALNWNESTKVCNTWTGVICNEDKTRIIALHLPGVGLNG 59
           +++PVEDKQALL+F+ +I HSR LNWNE + VCNTWTGV C+ D +R+IALHLPG+G  G
Sbjct: 21  FAEPVEDKQALLDFLNNINHSRTLNWNEYSSVCNTWTGVTCSGDHSRVIALHLPGIGFRG 80

Query: 58  RIPPNTISRLSELQILSLR 2
            IPPNT+ +LS +QILSLR
Sbjct: 81  EIPPNTLGQLSAVQILSLR 99


>ref|NP_194105.1| putative inactive receptor kinase [Arabidopsis thaliana]
           gi|75337688|sp|Q9SUQ3.1|Y4374_ARATH RecName:
           Full=Probable inactive receptor kinase At4g23740; Flags:
           Precursor gi|4454043|emb|CAA23040.1| putative receptor
           kinase [Arabidopsis thaliana] gi|7269223|emb|CAB81292.1|
           putative receptor kinase [Arabidopsis thaliana]
           gi|26451766|dbj|BAC42978.1| putative receptor kinase
           [Arabidopsis thaliana] gi|30793907|gb|AAP40406.1|
           putative leucine-rich repeat transmembrane protein
           kinase [Arabidopsis thaliana]
           gi|224589628|gb|ACN59347.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|332659400|gb|AEE84800.1| putative inactive receptor
           kinase [Arabidopsis thaliana]
          Length = 638

 Score =  118 bits (296), Expect = 1e-24
 Identities = 54/78 (69%), Positives = 69/78 (88%)
 Frame = -3

Query: 235 SDPVEDKQALLEFVRDIPHSRALNWNESTKVCNTWTGVICNEDKTRIIALHLPGVGLNGR 56
           SDP+EDK+ALLEF+  +  +R+LNWNE+++VCN WTGV CN+D +RIIA+ LPGVGLNG+
Sbjct: 24  SDPLEDKRALLEFLTIMQPTRSLNWNETSQVCNIWTGVTCNQDGSRIIAVRLPGVGLNGQ 83

Query: 55  IPPNTISRLSELQILSLR 2
           IPPNTISRLS L++LSLR
Sbjct: 84  IPPNTISRLSALRVLSLR 101


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