BLASTX nr result

ID: Coptis24_contig00020870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020870
         (794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155766.1| PREDICTED: flowering time control protein FY...   209   7e-52
ref|XP_004140291.1| PREDICTED: LOW QUALITY PROTEIN: flowering ti...   209   7e-52
ref|XP_002267704.2| PREDICTED: flowering time control protein FY...   209   7e-52
emb|CBI40175.3| unnamed protein product [Vitis vinifera]              209   7e-52
ref|XP_002513065.1| WD-repeat protein, putative [Ricinus communi...   207   2e-51

>ref|XP_004155766.1| PREDICTED: flowering time control protein FY-like [Cucumis sativus]
          Length = 588

 Score =  209 bits (531), Expect = 7e-52
 Identities = 94/102 (92%), Positives = 99/102 (97%)
 Frame = -1

Query: 308 HASTNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMIIQAHDQAIRSMIWSH 129
           H S NKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMI+QAHDQAIRSM+WSH
Sbjct: 164 HTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSH 223

Query: 128 NENWMVSGDDGGAIKYWQTNMNNVKANKSAHKESVRDLSFCK 3
           N+NWMVSGDDGG+IKYWQ NMNNVKANKSAHKESVRDLSFC+
Sbjct: 224 NDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDLSFCR 265



 Score =  107 bits (267), Expect = 3e-21
 Identities = 52/68 (76%), Positives = 59/68 (86%)
 Frame = -1

Query: 692 SSGPPPHMPYDAHGDSFAAKRIRKLVQRKAVDYTSTVVRYMQIRMWQRDARDRTVLQPTP 513
           +SG    +   AHGDSFAAKR+RKL QR+AVDYTSTVVRYMQ+RMWQRD++DRTVLQ TP
Sbjct: 79  NSGHVGKVEQQAHGDSFAAKRMRKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTP 138

Query: 512 AAAIDMLP 489
           AAAIDMLP
Sbjct: 139 AAAIDMLP 146


>ref|XP_004140291.1| PREDICTED: LOW QUALITY PROTEIN: flowering time control protein
           FY-like [Cucumis sativus]
          Length = 725

 Score =  209 bits (531), Expect = 7e-52
 Identities = 94/102 (92%), Positives = 99/102 (97%)
 Frame = -1

Query: 308 HASTNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMIIQAHDQAIRSMIWSH 129
           H S NKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMI+QAHDQAIRSM+WSH
Sbjct: 144 HTSINKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSH 203

Query: 128 NENWMVSGDDGGAIKYWQTNMNNVKANKSAHKESVRDLSFCK 3
           N+NWMVSGDDGG+IKYWQ NMNNVKANKSAHKESVRDLSFC+
Sbjct: 204 NDNWMVSGDDGGSIKYWQNNMNNVKANKSAHKESVRDLSFCR 245



 Score =  132 bits (331), Expect = 1e-28
 Identities = 73/106 (68%), Positives = 81/106 (76%), Gaps = 5/106 (4%)
 Frame = -1

Query: 791 GYDFQRGXXXXXXPM-RQLSVSSTNINPDY--HHQPS--SGPPPHMPYDAHGDSFAAKRI 627
           G DF RG      PM RQ S SST + PD+  HH P   SGP P  PY+AH DSFAAKR+
Sbjct: 22  GGDFSRGPPPPGPPMMRQPSASSTTLAPDFQQHHHPRHPSGPAPP-PYEAHSDSFAAKRM 80

Query: 626 RKLVQRKAVDYTSTVVRYMQIRMWQRDARDRTVLQPTPAAAIDMLP 489
           RKL QR+AVDYTSTVVRYMQ+RMWQRD++DRTVLQ TPAAAIDMLP
Sbjct: 81  RKLTQRRAVDYTSTVVRYMQLRMWQRDSKDRTVLQSTPAAAIDMLP 126


>ref|XP_002267704.2| PREDICTED: flowering time control protein FY-like [Vitis vinifera]
          Length = 730

 Score =  209 bits (531), Expect = 7e-52
 Identities = 94/102 (92%), Positives = 99/102 (97%)
 Frame = -1

Query: 308 HASTNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMIIQAHDQAIRSMIWSH 129
           H S NKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMI+QAHDQAIRSM+WSH
Sbjct: 131 HTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSH 190

Query: 128 NENWMVSGDDGGAIKYWQTNMNNVKANKSAHKESVRDLSFCK 3
           NENWMV+GDDGG+IKYWQ NMNNVKANKSAHKESVRDLSFC+
Sbjct: 191 NENWMVTGDDGGSIKYWQNNMNNVKANKSAHKESVRDLSFCR 232



 Score =  135 bits (340), Expect = 1e-29
 Identities = 67/87 (77%), Positives = 73/87 (83%)
 Frame = -1

Query: 749 MRQLSVSSTNINPDYHHQPSSGPPPHMPYDAHGDSFAAKRIRKLVQRKAVDYTSTVVRYM 570
           MRQ S SSTN+ P+YHH      P   PYDAH DSFAAKR+RKL QR+AVDYTSTVVRYM
Sbjct: 33  MRQPSASSTNLAPEYHH------PSAPPYDAHADSFAAKRMRKLAQRRAVDYTSTVVRYM 86

Query: 569 QIRMWQRDARDRTVLQPTPAAAIDMLP 489
           QIRMWQRD+RDRTVLQPTPAAAID+LP
Sbjct: 87  QIRMWQRDSRDRTVLQPTPAAAIDLLP 113


>emb|CBI40175.3| unnamed protein product [Vitis vinifera]
          Length = 699

 Score =  209 bits (531), Expect = 7e-52
 Identities = 94/102 (92%), Positives = 99/102 (97%)
 Frame = -1

Query: 308 HASTNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMIIQAHDQAIRSMIWSH 129
           H S NKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMI+QAHDQAIRSM+WSH
Sbjct: 100 HTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSH 159

Query: 128 NENWMVSGDDGGAIKYWQTNMNNVKANKSAHKESVRDLSFCK 3
           NENWMV+GDDGG+IKYWQ NMNNVKANKSAHKESVRDLSFC+
Sbjct: 160 NENWMVTGDDGGSIKYWQNNMNNVKANKSAHKESVRDLSFCR 201



 Score =  135 bits (340), Expect = 1e-29
 Identities = 67/87 (77%), Positives = 73/87 (83%)
 Frame = -1

Query: 749 MRQLSVSSTNINPDYHHQPSSGPPPHMPYDAHGDSFAAKRIRKLVQRKAVDYTSTVVRYM 570
           MRQ S SSTN+ P+YHH      P   PYDAH DSFAAKR+RKL QR+AVDYTSTVVRYM
Sbjct: 2   MRQPSASSTNLAPEYHH------PSAPPYDAHADSFAAKRMRKLAQRRAVDYTSTVVRYM 55

Query: 569 QIRMWQRDARDRTVLQPTPAAAIDMLP 489
           QIRMWQRD+RDRTVLQPTPAAAID+LP
Sbjct: 56  QIRMWQRDSRDRTVLQPTPAAAIDLLP 82


>ref|XP_002513065.1| WD-repeat protein, putative [Ricinus communis]
           gi|223548076|gb|EEF49568.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 727

 Score =  207 bits (527), Expect = 2e-51
 Identities = 93/102 (91%), Positives = 99/102 (97%)
 Frame = -1

Query: 308 HASTNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMIIQAHDQAIRSMIWSH 129
           H S NKNRCSINRVLWTP GRRLITGSQSGEFTLWNGQSFNFEMI+QAHDQAIRSM+WSH
Sbjct: 141 HTSLNKNRCSINRVLWTPNGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSH 200

Query: 128 NENWMVSGDDGGAIKYWQTNMNNVKANKSAHKESVRDLSFCK 3
           N+NWMVSGDDGGAIKYWQ+NMNNVKANK+AHKESVRDLSFC+
Sbjct: 201 NDNWMVSGDDGGAIKYWQSNMNNVKANKNAHKESVRDLSFCR 242



 Score =  134 bits (338), Expect = 2e-29
 Identities = 69/103 (66%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
 Frame = -1

Query: 791 GYDFQRGXXXXXXPM-RQLSVSSTNINPDYHHQPSSGPPPHMPYDAHGDSFAAKRIRKLV 615
           G +F RG      PM RQ S SST +N    H P    PP  PYD HGD+  A+R+RKL 
Sbjct: 22  GGEFLRGPPPPPPPMMRQPSASSTTLNSSDFHHPPGPAPPQPPYDVHGDNIGARRMRKLT 81

Query: 614 QRKAVDYTSTVVRYMQIRMWQRDARDRTVLQPTPAAAIDMLPT 486
           QR+AVDYTSTVVRYMQIRMWQRD+RDRTVLQPTPAAAIDMLPT
Sbjct: 82  QRRAVDYTSTVVRYMQIRMWQRDSRDRTVLQPTPAAAIDMLPT 124


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