BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020869
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]     87   2e-15
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    84   1e-14
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    84   1e-14
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    81   8e-14
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13

>gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
          Length = 392

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
 Frame = +3

Query: 66  DWSMDLTEDLLDEIASRIGSHADYVRLRAVSPAWRTFLPKLPRHQHCASPGLMFPMRNTY 245
           DW+ +L  DLL +I+  +  ++DY+R R V  +WR+ +PK+P       P L+ P+   Y
Sbjct: 3   DWT-ELPPDLLQQISDYLTVYSDYLRFRVVCQSWRSSVPKIPHRLPPQLPCLIIPL---Y 58

Query: 246 CDCDCDAFNLFMANGEVHNVKLPKAE-HGLWRGSSKGWLVQLDDSNSINLINPVTKTRLQ 422
            DC C  FN   ++ ++H + LP+A       GSS GWL  LD++ SI L+NP+T+ + +
Sbjct: 59  HDCRCGLFNF--SDNKIHFLYLPEASLRKRPCGSSHGWLTILDETPSILLLNPLTRAKFR 116

Query: 423 LPPL 434
           LPPL
Sbjct: 117 LPPL 120


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 51/124 (41%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
 Frame = +3

Query: 66  DWSMDLTEDLLDEIASRIGSHADYVRLRAVSPAWRTFLPKLPRHQHCASPGLMFPMRNTY 245
           DWS  L  +LLD IA +   + DYVR RAV   WR  +PK P H     P LM P    +
Sbjct: 3   DWSQ-LHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPH 61

Query: 246 CDCDCDAFNLFMANGEVHNVKLPKAEH-GLWRGSSKGWLVQLDDSNSINLINPVTKTRLQ 422
                  F+L +   + H ++LP+A H    RGSS GWL+ LD++  I L+NP+T++++ 
Sbjct: 62  -HTHRPFFSLSL--NKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVH 118

Query: 423 LPPL 434
           LPPL
Sbjct: 119 LPPL 122


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 51/124 (41%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
 Frame = +3

Query: 66  DWSMDLTEDLLDEIASRIGSHADYVRLRAVSPAWRTFLPKLPRHQHCASPGLMFPMRNTY 245
           DWS  L  +LLD IA +   + DYVR RAV   WR  +PK P H     P LM P    +
Sbjct: 3   DWSQ-LHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPH 61

Query: 246 CDCDCDAFNLFMANGEVHNVKLPKAEH-GLWRGSSKGWLVQLDDSNSINLINPVTKTRLQ 422
                  F+L +   + H ++LP+A H    RGSS GWL+ LD++  I L+NP+T++++ 
Sbjct: 62  -HTHRPFFSLSL--NKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVH 118

Query: 423 LPPL 434
           LPPL
Sbjct: 119 LPPL 122


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 48/125 (38%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
 Frame = +3

Query: 63  MDWSMDLTEDLLDEIASRIGSHADYVRLRAVSPAWRTFLPKLPRHQHCASPGLMFPMRNT 242
           MDWS  L  +L++ I+  +  ++DY+  RAV  AWR  +PK P H     P LM P   +
Sbjct: 3   MDWSQ-LPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLPQSQS 61

Query: 243 YCDCDCDAFNLFMANGEVHNVKLPKAEHGLWR-GSSKGWLVQLDDSNSINLINPVTKTRL 419
             +    AF   ++  + H + LP+  +     GSS GWL+ LDD+ +I LINP+T+ +L
Sbjct: 62  QSNQSRRAF-FSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKL 120

Query: 420 QLPPL 434
            LPPL
Sbjct: 121 SLPPL 125


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
 Frame = +3

Query: 60  SMDWSMDLTEDLLDEIASRIGSHADYVRLRAVSPAWRTFLPKLPRHQHCASPGLMFPMRN 239
           ++DW+  L  +L++ I+ +I  ++DY+  +AV  AW++ +PK P H     P L+ P   
Sbjct: 2   AVDWTQ-LPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQ 60

Query: 240 TYCDCDCDAFNLFMANGEVHNVKLPKAEHGLWR-GSSKGWLVQLDDSNSINLINPVTKTR 416
           +        FNL  +  + H++ LP+A H     GSS GWL+ LDDS SI +INP+T+ +
Sbjct: 61  SNQSSYRAFFNL--STYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLTRRK 118

Query: 417 LQLPPL 434
           + LP +
Sbjct: 119 IHLPAI 124