BLASTX nr result

ID: Coptis24_contig00020853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020853
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18157.3| unnamed protein product [Vitis vinifera]              256   2e-66
ref|XP_002268373.1| PREDICTED: ABC transporter G family member 2...   256   2e-66
ref|XP_002327338.1| white-brown-complex ABC transporter family [...   254   4e-66
ref|XP_002325552.1| white-brown-complex ABC transporter family [...   253   9e-66
ref|XP_002534493.1| ATP-binding cassette transporter, putative [...   250   1e-64

>emb|CBI18157.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  256 bits (653), Expect = 2e-66
 Identities = 118/142 (83%), Positives = 133/142 (93%)
 Frame = -1

Query: 426 TSWFNQFTILLQRSLKERTHESFNSLRVFQVIAAAFLAGIMWWHSDIRDVQDRLGLLFFI 247
           ++WFNQF+ILLQR LKER HESFNSLRVFQVIAAA LAG+MWWHSD  D+QDRLGLLFFI
Sbjct: 392 STWFNQFSILLQRGLKERKHESFNSLRVFQVIAAALLAGLMWWHSDFLDIQDRLGLLFFI 451

Query: 246 TIFWGVFPSFNAVFAFPQERAIFLKERASGMYTLSSYFMARVVGDLPMELILPTIFVTVT 67
            IFWGVFPSFN+VFAFPQERAIF+KERASGMYTLSSYFMAR+VGD+PMELILP +F+TV 
Sbjct: 452 AIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMARIVGDMPMELILPMVFLTVA 511

Query: 66  YWMAGLKPEIGAFILTVAVLLG 1
           YWMAGLKPE+GAF+LT+ +LLG
Sbjct: 512 YWMAGLKPEVGAFLLTLVILLG 533


>ref|XP_002268373.1| PREDICTED: ABC transporter G family member 25-like [Vitis vinifera]
          Length = 664

 Score =  256 bits (653), Expect = 2e-66
 Identities = 118/142 (83%), Positives = 133/142 (93%)
 Frame = -1

Query: 426 TSWFNQFTILLQRSLKERTHESFNSLRVFQVIAAAFLAGIMWWHSDIRDVQDRLGLLFFI 247
           ++WFNQF+ILLQR LKER HESFNSLRVFQVIAAA LAG+MWWHSD  D+QDRLGLLFFI
Sbjct: 392 STWFNQFSILLQRGLKERKHESFNSLRVFQVIAAALLAGLMWWHSDFLDIQDRLGLLFFI 451

Query: 246 TIFWGVFPSFNAVFAFPQERAIFLKERASGMYTLSSYFMARVVGDLPMELILPTIFVTVT 67
            IFWGVFPSFN+VFAFPQERAIF+KERASGMYTLSSYFMAR+VGD+PMELILP +F+TV 
Sbjct: 452 AIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMARIVGDMPMELILPMVFLTVA 511

Query: 66  YWMAGLKPEIGAFILTVAVLLG 1
           YWMAGLKPE+GAF+LT+ +LLG
Sbjct: 512 YWMAGLKPEVGAFLLTLVILLG 533


>ref|XP_002327338.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222835708|gb|EEE74143.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 652

 Score =  254 bits (650), Expect = 4e-66
 Identities = 123/157 (78%), Positives = 140/157 (89%), Gaps = 3/157 (1%)
 Frame = -1

Query: 462 SYKEENKRS---ITSTSWFNQFTILLQRSLKERTHESFNSLRVFQVIAAAFLAGIMWWHS 292
           SY  +  RS   I+  +WFNQF+ILLQRSLKER HESFN+LRVFQVI AA  AG+MWWHS
Sbjct: 365 SYNSKEHRSSDRISIDAWFNQFSILLQRSLKERKHESFNTLRVFQVIMAAVFAGLMWWHS 424

Query: 291 DIRDVQDRLGLLFFITIFWGVFPSFNAVFAFPQERAIFLKERASGMYTLSSYFMARVVGD 112
           D RDVQDRLGLLFF++IFWGVFPS N+VF FPQERAIF+KERASGMYTLSSYFM+R+VGD
Sbjct: 425 DFRDVQDRLGLLFFMSIFWGVFPSSNSVFVFPQERAIFVKERASGMYTLSSYFMSRIVGD 484

Query: 111 LPMELILPTIFVTVTYWMAGLKPEIGAFILTVAVLLG 1
           LPMELILPTIF++VTYWMAGLKPE+GAF+LT+ VLLG
Sbjct: 485 LPMELILPTIFLSVTYWMAGLKPELGAFLLTLLVLLG 521


>ref|XP_002325552.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222862427|gb|EEE99933.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 648

 Score =  253 bits (647), Expect = 9e-66
 Identities = 121/155 (78%), Positives = 140/155 (90%), Gaps = 1/155 (0%)
 Frame = -1

Query: 462 SYKEENKRS-ITSTSWFNQFTILLQRSLKERTHESFNSLRVFQVIAAAFLAGIMWWHSDI 286
           S+KE      I+ +SWFNQF+ILLQRSLKER HESFN+LR+ QVI AA LAG+MWWHSD 
Sbjct: 363 SFKEHRSSDRISISSWFNQFSILLQRSLKERKHESFNTLRISQVIMAAVLAGLMWWHSDF 422

Query: 285 RDVQDRLGLLFFITIFWGVFPSFNAVFAFPQERAIFLKERASGMYTLSSYFMARVVGDLP 106
           RD+QDRLGLLFF++IFWGVFPS N+VF FPQERAIF+KERASGMYTLSSYFM+R+VGDLP
Sbjct: 423 RDIQDRLGLLFFMSIFWGVFPSSNSVFVFPQERAIFVKERASGMYTLSSYFMSRIVGDLP 482

Query: 105 MELILPTIFVTVTYWMAGLKPEIGAFILTVAVLLG 1
           MELILPTIF++VTYWMAGLKPE+GAF+LT+ VLLG
Sbjct: 483 MELILPTIFLSVTYWMAGLKPELGAFLLTLLVLLG 517


>ref|XP_002534493.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223525196|gb|EEF27890.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 572

 Score =  250 bits (638), Expect = 1e-64
 Identities = 116/141 (82%), Positives = 132/141 (93%)
 Frame = -1

Query: 423 SWFNQFTILLQRSLKERTHESFNSLRVFQVIAAAFLAGIMWWHSDIRDVQDRLGLLFFIT 244
           +WFNQF+ILLQRSLKER HE+FN+LRVFQVIAAA LAG+MWWHSD RD+QDRLGLLF+  
Sbjct: 299 AWFNQFSILLQRSLKERKHETFNALRVFQVIAAALLAGLMWWHSDFRDIQDRLGLLFYTA 358

Query: 243 IFWGVFPSFNAVFAFPQERAIFLKERASGMYTLSSYFMARVVGDLPMELILPTIFVTVTY 64
           IFWGVFPSFN+VFAFPQERAIF+KERASGMYTLSSYFM+R+VGDLPMELILPTIF+TV Y
Sbjct: 359 IFWGVFPSFNSVFAFPQERAIFIKERASGMYTLSSYFMSRIVGDLPMELILPTIFLTVVY 418

Query: 63  WMAGLKPEIGAFILTVAVLLG 1
           WMAGLKP + +F+LT+ VLLG
Sbjct: 419 WMAGLKPNVVSFLLTLLVLLG 439


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