BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020848
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein S...   202   7e-50
gb|AFK39424.1| unknown [Lotus japonicus]                              198   9e-49
ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycin...   197   1e-48
ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein S...   197   1e-48
ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein S...   197   2e-48

>ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Vitis vinifera]
           gi|297744494|emb|CBI37756.3| unnamed protein product
           [Vitis vinifera]
          Length = 132

 Score =  202 bits (513), Expect = 7e-50
 Identities = 97/103 (94%), Positives = 102/103 (99%)
 Frame = +1

Query: 61  MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKTTQL 240
           MSRSLGIPVKLLHEAAGH+VTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGK +QL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQL 60

Query: 241 EHVFIRGSKVRFMVIPDMLKHAPMFKRLDAKIKGKGSALGVGR 369
           EHVFIRGSKVRFMVIPDMLK+APMFKRLDA++KGKGSALGVGR
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARVKGKGSALGVGR 103


>gb|AFK39424.1| unknown [Lotus japonicus]
          Length = 133

 Score =  198 bits (503), Expect = 9e-49
 Identities = 94/105 (89%), Positives = 104/105 (99%)
 Frame = +1

Query: 55  VKMSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKTT 234
           + MSRSLGIPVKLLHEA+GH+VTVELKSGELYRG+MIECEDNWNCQLE+IT+TAKDGKT+
Sbjct: 1   MSMSRSLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTS 60

Query: 235 QLEHVFIRGSKVRFMVIPDMLKHAPMFKRLDAKIKGKGSALGVGR 369
           QLEHVFIRGSKVRFMVIPDMLK+APMFKRLDAKIKGKG++LGVGR
Sbjct: 61  QLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDAKIKGKGASLGVGR 105


>ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycine max]
           gi|356525557|ref|XP_003531391.1| PREDICTED: small
           nuclear ribonucleoprotein Sm D3-like [Glycine max]
           gi|255626793|gb|ACU13741.1| unknown [Glycine max]
          Length = 131

 Score =  197 bits (502), Expect = 1e-48
 Identities = 94/103 (91%), Positives = 103/103 (100%)
 Frame = +1

Query: 61  MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKTTQL 240
           MSRSLGIPVKLLHEA+GH+VTVELKSGELYRGSMIECEDNWNCQLE+IT+TAKDGKT+QL
Sbjct: 1   MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 60

Query: 241 EHVFIRGSKVRFMVIPDMLKHAPMFKRLDAKIKGKGSALGVGR 369
           EHVFIRGSKVRFMVIPDMLK+APMFKRLDA+IKGKG++LGVGR
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR 103


>ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Vitis
           vinifera] gi|297745546|emb|CBI40711.3| unnamed protein
           product [Vitis vinifera]
          Length = 132

 Score =  197 bits (502), Expect = 1e-48
 Identities = 95/103 (92%), Positives = 101/103 (98%)
 Frame = +1

Query: 61  MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKTTQL 240
           MSRSLGIPVKLLHEAAGH+VTVELKSGELYRG+MIECEDNWNCQLE+ITFT KDGK +QL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGNMIECEDNWNCQLESITFTGKDGKVSQL 60

Query: 241 EHVFIRGSKVRFMVIPDMLKHAPMFKRLDAKIKGKGSALGVGR 369
           EHVFIRGSKVRFMVIPDMLK+APMFKRLDA+IKGKGSALGVGR
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSALGVGR 103


>ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
           sativus]
          Length = 132

 Score =  197 bits (501), Expect = 2e-48
 Identities = 94/103 (91%), Positives = 102/103 (99%)
 Frame = +1

Query: 61  MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKTTQL 240
           MSRSLGIPVKLLHEAAGH+V+VELKSGELYRGSMIECEDNWNCQLENIT+TAKDGK +QL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL 60

Query: 241 EHVFIRGSKVRFMVIPDMLKHAPMFKRLDAKIKGKGSALGVGR 369
           EHVFIRGSKVRFMVIPDMLK+APMFKRLDA+IKGKG++LGVGR
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASLGVGR 103