BLASTX nr result
ID: Coptis24_contig00020847
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020847 (227 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635231.1| PREDICTED: ruvB-like 2-like, partial [Vitis ... 66 3e-09 emb|CAN80826.1| hypothetical protein VITISV_015453 [Vitis vinifera] 66 3e-09 ref|XP_002460919.1| hypothetical protein SORBIDRAFT_02g037530 [S... 63 2e-08 gb|AFG28394.1| RuvB3, partial [Plasmodium falciparum 3D7] 62 6e-08 ref|XP_001350333.1| ATP-dependent DNA helicase, putative [Plasmo... 62 6e-08 >ref|XP_003635231.1| PREDICTED: ruvB-like 2-like, partial [Vitis vinifera] Length = 217 Score = 65.9 bits (159), Expect = 3e-09 Identities = 29/45 (64%), Positives = 37/45 (82%) Frame = -3 Query: 225 DVKRVYALFQDVKRSTEYLMEYQSEYMFSEMPSKEGDGDEESDAL 91 D+ RVY LF DVKRST+YLMEYQ++YMF+E+P+ EGD DE + L Sbjct: 172 DISRVYQLFLDVKRSTQYLMEYQNQYMFNEVPAGEGDDDESTAML 216 >emb|CAN80826.1| hypothetical protein VITISV_015453 [Vitis vinifera] Length = 467 Score = 65.9 bits (159), Expect = 3e-09 Identities = 29/45 (64%), Positives = 37/45 (82%) Frame = -3 Query: 225 DVKRVYALFQDVKRSTEYLMEYQSEYMFSEMPSKEGDGDEESDAL 91 D+ RVY LF DVKRST+YLMEYQ++YMF+E+P+ EGD DE + L Sbjct: 422 DISRVYQLFLDVKRSTQYLMEYQNQYMFNEVPAGEGDDDESTAML 466 >ref|XP_002460919.1| hypothetical protein SORBIDRAFT_02g037530 [Sorghum bicolor] gi|241924296|gb|EER97440.1| hypothetical protein SORBIDRAFT_02g037530 [Sorghum bicolor] Length = 480 Score = 63.2 bits (152), Expect = 2e-08 Identities = 32/47 (68%), Positives = 38/47 (80%) Frame = -3 Query: 225 DVKRVYALFQDVKRSTEYLMEYQSEYMFSEMPSKEGDGDEESDALHS 85 D+ RVY LF DVKRST+YLMEYQS+YMF+E+P E DGD E DA+ S Sbjct: 436 DISRVYQLFLDVKRSTQYLMEYQSQYMFNEVPG-EADGDGE-DAMQS 480 >gb|AFG28394.1| RuvB3, partial [Plasmodium falciparum 3D7] Length = 482 Score = 61.6 bits (148), Expect = 6e-08 Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 5/51 (9%) Frame = -3 Query: 225 DVKRVYALFQDVKRSTEYLMEYQSEYMFSEMPS-----KEGDGDEESDALH 88 DV+RVY LF DVKRST+YL+EYQ+E+MFSE+P KE D EE LH Sbjct: 422 DVRRVYNLFIDVKRSTQYLIEYQNEFMFSELPKEELSVKEEDSSEEKRELH 472 >ref|XP_001350333.1| ATP-dependent DNA helicase, putative [Plasmodium falciparum 3D7] gi|23615750|emb|CAD52742.1| ATP-dependent DNA helicase, putative [Plasmodium falciparum 3D7] Length = 483 Score = 61.6 bits (148), Expect = 6e-08 Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 5/51 (9%) Frame = -3 Query: 225 DVKRVYALFQDVKRSTEYLMEYQSEYMFSEMPS-----KEGDGDEESDALH 88 DV+RVY LF DVKRST+YL+EYQ+E+MFSE+P KE D EE LH Sbjct: 422 DVRRVYNLFIDVKRSTQYLIEYQNEFMFSELPKEELSVKEEDSSEEKRELH 472