BLASTX nr result
ID: Coptis24_contig00020840
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020840 (375 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266225.1| PREDICTED: ATP-dependent DNA helicase Q-like... 88 6e-18 emb|CBI27562.3| unnamed protein product [Vitis vinifera] 88 6e-18 ref|XP_003637322.1| ATP-dependent DNA helicase Q4 [Medicago trun... 89 1e-16 ref|XP_002315627.1| predicted protein [Populus trichocarpa] gi|2... 86 5e-16 ref|XP_003524165.1| PREDICTED: uncharacterized protein LOC100783... 82 1e-15 >ref|XP_002266225.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Vitis vinifera] Length = 941 Score = 88.2 bits (217), Expect(2) = 6e-18 Identities = 40/70 (57%), Positives = 47/70 (67%) Frame = +1 Query: 82 EITYEVKDPAFCYRIVKNLGDFCSLTSQITRWLSEVESCKVMKLDETFNATTFTTLMCDK 261 EITYE+KDPA+CY IV GD C L + +T+WLSEVESCKV KLD FNA +C+K Sbjct: 770 EITYEMKDPAYCYTIVDVPGDLCCLAAHLTKWLSEVESCKVQKLDTMFNAAVSAVELCEK 829 Query: 262 TDRCSGTLHT 291 C G HT Sbjct: 830 KCGCLGAQHT 839 Score = 27.3 bits (59), Expect(2) = 6e-18 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +2 Query: 284 YTHCLQSRISDYFSRD 331 +T CLQ +ISDYFS D Sbjct: 838 HTPCLQRKISDYFSGD 853 >emb|CBI27562.3| unnamed protein product [Vitis vinifera] Length = 688 Score = 88.2 bits (217), Expect(2) = 6e-18 Identities = 40/70 (57%), Positives = 47/70 (67%) Frame = +1 Query: 82 EITYEVKDPAFCYRIVKNLGDFCSLTSQITRWLSEVESCKVMKLDETFNATTFTTLMCDK 261 EITYE+KDPA+CY IV GD C L + +T+WLSEVESCKV KLD FNA +C+K Sbjct: 517 EITYEMKDPAYCYTIVDVPGDLCCLAAHLTKWLSEVESCKVQKLDTMFNAAVSAVELCEK 576 Query: 262 TDRCSGTLHT 291 C G HT Sbjct: 577 KCGCLGAQHT 586 Score = 27.3 bits (59), Expect(2) = 6e-18 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +2 Query: 284 YTHCLQSRISDYFSRD 331 +T CLQ +ISDYFS D Sbjct: 585 HTPCLQRKISDYFSGD 600 >ref|XP_003637322.1| ATP-dependent DNA helicase Q4 [Medicago truncatula] gi|355503257|gb|AES84460.1| ATP-dependent DNA helicase Q4 [Medicago truncatula] Length = 737 Score = 88.6 bits (218), Expect(2) = 1e-16 Identities = 41/70 (58%), Positives = 50/70 (71%) Frame = +1 Query: 82 EITYEVKDPAFCYRIVKNLGDFCSLTSQITRWLSEVESCKVMKLDETFNATTFTTLMCDK 261 EITYE+KD A+CYRI++ DF SL++ ITRWLSEVE CKV K+D FNA F +CDK Sbjct: 425 EITYEMKDMAYCYRILEAPADFFSLSADITRWLSEVECCKVRKMDAMFNAAYFAVNLCDK 484 Query: 262 TDRCSGTLHT 291 CS + HT Sbjct: 485 MSGCSSSDHT 494 Score = 22.3 bits (46), Expect(2) = 1e-16 Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%) Frame = +2 Query: 284 YTHCLQSRISDYFSR-DNTD 340 +T CLQ I DYF+ DN D Sbjct: 493 HTSCLQRIILDYFAGVDNAD 512 >ref|XP_002315627.1| predicted protein [Populus trichocarpa] gi|222864667|gb|EEF01798.1| predicted protein [Populus trichocarpa] Length = 901 Score = 85.5 bits (210), Expect(2) = 5e-16 Identities = 40/70 (57%), Positives = 47/70 (67%) Frame = +1 Query: 82 EITYEVKDPAFCYRIVKNLGDFCSLTSQITRWLSEVESCKVMKLDETFNATTFTTLMCDK 261 EITY+VKDPA+CY IV+ DFCSL+ +T+WL EVE KV KLD FNA F C+K Sbjct: 730 EITYDVKDPAYCYSIVEVPRDFCSLSRHLTKWLLEVECFKVQKLDAMFNAAIFAVNDCEK 789 Query: 262 TDRCSGTLHT 291 C GT HT Sbjct: 790 MQGCHGTQHT 799 Score = 23.5 bits (49), Expect(2) = 5e-16 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +2 Query: 284 YTHCLQSRISDYFSRD 331 +T CLQ +I DYF D Sbjct: 798 HTPCLQRKILDYFKDD 813 >ref|XP_003524165.1| PREDICTED: uncharacterized protein LOC100783165 [Glycine max] Length = 1272 Score = 82.4 bits (202), Expect(2) = 1e-15 Identities = 38/70 (54%), Positives = 47/70 (67%) Frame = +1 Query: 82 EITYEVKDPAFCYRIVKNLGDFCSLTSQITRWLSEVESCKVMKLDETFNATTFTTLMCDK 261 EITYE+KD A+CYRI++ D SL++ TRWLSEVE+CKV K+D FNA F +CD Sbjct: 963 EITYEMKDLAYCYRIIEVPTDLLSLSADNTRWLSEVENCKVRKMDAMFNAAYFALNLCDN 1022 Query: 262 TDRCSGTLHT 291 C G HT Sbjct: 1023 MQGCGGANHT 1032 Score = 25.4 bits (54), Expect(2) = 1e-15 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Frame = +2 Query: 281 HYTHCLQSRISDYFSR-DNTD 340 ++T CLQ +I DYFS DN D Sbjct: 1030 NHTPCLQRKILDYFSGVDNAD 1050