BLASTX nr result

ID: Coptis24_contig00020840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020840
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266225.1| PREDICTED: ATP-dependent DNA helicase Q-like...    88   6e-18
emb|CBI27562.3| unnamed protein product [Vitis vinifera]               88   6e-18
ref|XP_003637322.1| ATP-dependent DNA helicase Q4 [Medicago trun...    89   1e-16
ref|XP_002315627.1| predicted protein [Populus trichocarpa] gi|2...    86   5e-16
ref|XP_003524165.1| PREDICTED: uncharacterized protein LOC100783...    82   1e-15

>ref|XP_002266225.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Vitis
           vinifera]
          Length = 941

 Score = 88.2 bits (217), Expect(2) = 6e-18
 Identities = 40/70 (57%), Positives = 47/70 (67%)
 Frame = +1

Query: 82  EITYEVKDPAFCYRIVKNLGDFCSLTSQITRWLSEVESCKVMKLDETFNATTFTTLMCDK 261
           EITYE+KDPA+CY IV   GD C L + +T+WLSEVESCKV KLD  FNA      +C+K
Sbjct: 770 EITYEMKDPAYCYTIVDVPGDLCCLAAHLTKWLSEVESCKVQKLDTMFNAAVSAVELCEK 829

Query: 262 TDRCSGTLHT 291
              C G  HT
Sbjct: 830 KCGCLGAQHT 839



 Score = 27.3 bits (59), Expect(2) = 6e-18
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 284 YTHCLQSRISDYFSRD 331
           +T CLQ +ISDYFS D
Sbjct: 838 HTPCLQRKISDYFSGD 853


>emb|CBI27562.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score = 88.2 bits (217), Expect(2) = 6e-18
 Identities = 40/70 (57%), Positives = 47/70 (67%)
 Frame = +1

Query: 82  EITYEVKDPAFCYRIVKNLGDFCSLTSQITRWLSEVESCKVMKLDETFNATTFTTLMCDK 261
           EITYE+KDPA+CY IV   GD C L + +T+WLSEVESCKV KLD  FNA      +C+K
Sbjct: 517 EITYEMKDPAYCYTIVDVPGDLCCLAAHLTKWLSEVESCKVQKLDTMFNAAVSAVELCEK 576

Query: 262 TDRCSGTLHT 291
              C G  HT
Sbjct: 577 KCGCLGAQHT 586



 Score = 27.3 bits (59), Expect(2) = 6e-18
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 284 YTHCLQSRISDYFSRD 331
           +T CLQ +ISDYFS D
Sbjct: 585 HTPCLQRKISDYFSGD 600


>ref|XP_003637322.1| ATP-dependent DNA helicase Q4 [Medicago truncatula]
           gi|355503257|gb|AES84460.1| ATP-dependent DNA helicase
           Q4 [Medicago truncatula]
          Length = 737

 Score = 88.6 bits (218), Expect(2) = 1e-16
 Identities = 41/70 (58%), Positives = 50/70 (71%)
 Frame = +1

Query: 82  EITYEVKDPAFCYRIVKNLGDFCSLTSQITRWLSEVESCKVMKLDETFNATTFTTLMCDK 261
           EITYE+KD A+CYRI++   DF SL++ ITRWLSEVE CKV K+D  FNA  F   +CDK
Sbjct: 425 EITYEMKDMAYCYRILEAPADFFSLSADITRWLSEVECCKVRKMDAMFNAAYFAVNLCDK 484

Query: 262 TDRCSGTLHT 291
              CS + HT
Sbjct: 485 MSGCSSSDHT 494



 Score = 22.3 bits (46), Expect(2) = 1e-16
 Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +2

Query: 284 YTHCLQSRISDYFSR-DNTD 340
           +T CLQ  I DYF+  DN D
Sbjct: 493 HTSCLQRIILDYFAGVDNAD 512


>ref|XP_002315627.1| predicted protein [Populus trichocarpa] gi|222864667|gb|EEF01798.1|
           predicted protein [Populus trichocarpa]
          Length = 901

 Score = 85.5 bits (210), Expect(2) = 5e-16
 Identities = 40/70 (57%), Positives = 47/70 (67%)
 Frame = +1

Query: 82  EITYEVKDPAFCYRIVKNLGDFCSLTSQITRWLSEVESCKVMKLDETFNATTFTTLMCDK 261
           EITY+VKDPA+CY IV+   DFCSL+  +T+WL EVE  KV KLD  FNA  F    C+K
Sbjct: 730 EITYDVKDPAYCYSIVEVPRDFCSLSRHLTKWLLEVECFKVQKLDAMFNAAIFAVNDCEK 789

Query: 262 TDRCSGTLHT 291
              C GT HT
Sbjct: 790 MQGCHGTQHT 799



 Score = 23.5 bits (49), Expect(2) = 5e-16
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 284 YTHCLQSRISDYFSRD 331
           +T CLQ +I DYF  D
Sbjct: 798 HTPCLQRKILDYFKDD 813


>ref|XP_003524165.1| PREDICTED: uncharacterized protein LOC100783165 [Glycine max]
          Length = 1272

 Score = 82.4 bits (202), Expect(2) = 1e-15
 Identities = 38/70 (54%), Positives = 47/70 (67%)
 Frame = +1

Query: 82   EITYEVKDPAFCYRIVKNLGDFCSLTSQITRWLSEVESCKVMKLDETFNATTFTTLMCDK 261
            EITYE+KD A+CYRI++   D  SL++  TRWLSEVE+CKV K+D  FNA  F   +CD 
Sbjct: 963  EITYEMKDLAYCYRIIEVPTDLLSLSADNTRWLSEVENCKVRKMDAMFNAAYFALNLCDN 1022

Query: 262  TDRCSGTLHT 291
               C G  HT
Sbjct: 1023 MQGCGGANHT 1032



 Score = 25.4 bits (54), Expect(2) = 1e-15
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +2

Query: 281  HYTHCLQSRISDYFSR-DNTD 340
            ++T CLQ +I DYFS  DN D
Sbjct: 1030 NHTPCLQRKILDYFSGVDNAD 1050


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