BLASTX nr result

ID: Coptis24_contig00020830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020830
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275125.1| PREDICTED: uncharacterized protein LOC100257...   306   6e-81
ref|XP_002515310.1| conserved hypothetical protein [Ricinus comm...   303   7e-80
gb|ABK93302.1| unknown [Populus trichocarpa]                          294   3e-77
gb|AAX47176.1| expressed protein [Pisum sativum]                      291   2e-76
ref|XP_003591442.1| hypothetical protein MTR_1g087500 [Medicago ...   286   9e-75

>ref|XP_002275125.1| PREDICTED: uncharacterized protein LOC100257226 [Vitis vinifera]
           gi|297743955|emb|CBI36925.3| unnamed protein product
           [Vitis vinifera]
          Length = 257

 Score =  306 bits (784), Expect = 6e-81
 Identities = 165/258 (63%), Positives = 192/258 (74%), Gaps = 4/258 (1%)
 Frame = +3

Query: 42  SSPASPNCKRTRDPEDEAYLDNFHSHKRYLSEIMASSLNGLSVGESMPENLIESPVRSET 221
           SS +SP+ KR+RDPEDE YLDN HSHKRYLSEIMASSLNGL+VG+ + ENL+ESP RSET
Sbjct: 11  SSSSSPSGKRSRDPEDEVYLDNLHSHKRYLSEIMASSLNGLTVGDPLHENLMESPARSET 70

Query: 222 MSYLRDDFSLQYSPMSEDSDDARYSETPLSTSMTPSDSLPTSPCSPHRHQRPHNGTASSS 401
           M YLRDD SLQYSPMSEDSDD RY E P++ S + +DSLPTSP SPHR+QRP +  +SS 
Sbjct: 71  MFYLRDDMSLQYSPMSEDSDDNRYCEIPINISSSQTDSLPTSPVSPHRYQRPFSALSSSG 130

Query: 402 YT---SLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRVQPPA 572
            T   S GC L +VAC+QPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMR QPP 
Sbjct: 131 TTACPSHGCTLAAVACAQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPPG 190

Query: 573 LPSFELAFSPDQEPMQNMEPEDQPCSCGKSIVQECSCQNQQQIPDLFAEECSSIRDPDSE 752
              FEL FS  QE ++NME E++PC     +V E          D   EECSS+   + E
Sbjct: 191 PSVFELPFSAGQEAVRNMETEERPC-----LVDE---------RDYRIEECSSMGISEHE 236

Query: 753 V-REKPYRLLDLNVKEVE 803
             REK  R+L++N+K  E
Sbjct: 237 FNREKSCRVLNMNLKGEE 254


>ref|XP_002515310.1| conserved hypothetical protein [Ricinus communis]
           gi|223545790|gb|EEF47294.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score =  303 bits (775), Expect = 7e-80
 Identities = 161/258 (62%), Positives = 193/258 (74%), Gaps = 6/258 (2%)
 Frame = +3

Query: 39  SSSPASPNCKRTRDPEDEAYLDNFHSHKRYLSEIMASSLNGLSVGESMPENLIESPVRSE 218
           S+S ASPN KR RDPEDE YLDN HSHKRYLSEIMASSLNGL+VG+ +PENL+ESP RS+
Sbjct: 15  STSTASPNGKRNRDPEDEVYLDNLHSHKRYLSEIMASSLNGLTVGDPIPENLMESPARSD 74

Query: 219 TMSYLRDDFSLQYSPMSEDSDDARYSET-PLSTSMTPSDSLPTSPCSPHRHQRPHNGTAS 395
           +M Y+ D+ SLQYSPMSEDSDD+R+ ET P++T  +  DSLPTSP SP+R+QR   G +S
Sbjct: 75  SMFYVWDEMSLQYSPMSEDSDDSRFCETGPINTCSSQPDSLPTSPVSPYRYQRSFGGFSS 134

Query: 396 ----SSYTSLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRVQ 563
               SSY + GC ++SVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMR Q
Sbjct: 135 APSTSSYPAHGCTVSSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRTQ 194

Query: 564 PPALPSFELAFSPDQEPMQNMEPEDQPCSCGKSIVQECSCQNQQQIPDLFAEECSSIRDP 743
           PP   SFEL F   QEP  N+E E++PCS  KS+V E          D   EE SS+   
Sbjct: 195 PPGSSSFELPFGSGQEPASNIEAEERPCSYMKSLVDE---------RDYQIEEQSSMGSS 245

Query: 744 DSEVRE-KPYRLLDLNVK 794
           + E  + K  R+L++N++
Sbjct: 246 EPEFNDGKSCRVLNMNIE 263


>gb|ABK93302.1| unknown [Populus trichocarpa]
          Length = 271

 Score =  294 bits (752), Expect = 3e-77
 Identities = 157/257 (61%), Positives = 194/257 (75%), Gaps = 5/257 (1%)
 Frame = +3

Query: 39  SSSPASPNCKRTRDPEDEAYLDNFHSHKRYLSEIMASSLNGLSVGESMPENLIESPVRSE 218
           +S+P++PN KR+RDPEDE YLDN HSHKRYLSEIMASSLNGL+VG+ + +NL+ESP RS+
Sbjct: 21  TSTPSTPNGKRSRDPEDEVYLDNLHSHKRYLSEIMASSLNGLTVGDPLQDNLMESPARSD 80

Query: 219 TMSYLRDDFSLQYSPMSEDSDDARYSETPLSTSMTPSDSLPTSPCSPHRHQRPHNGTA-- 392
           TM + RD+ SLQYSPMSED DD+R+ ETP++     S+SLP SP SP+R+QRP  G +  
Sbjct: 81  TMFFARDEMSLQYSPMSEDFDDSRFCETPINACSPQSESLPGSPVSPYRYQRPLCGFSSA 140

Query: 393 --SSSYTSLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRVQP 566
             SSS++S GC++TS   SQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMR QP
Sbjct: 141 PYSSSFSSHGCSVTS---SQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRTQP 197

Query: 567 PALPSFELAFSPDQEPMQNMEPEDQPCSCGKSIVQECSCQNQQQIPDLFAEECSSIRDPD 746
               SFEL FS   EP  NME E++PCS  KS+V+E      ++ P    EECSS+   +
Sbjct: 198 TGSSSFELPFSSGHEPGSNMEAEERPCSYMKSLVEE------REYP---LEECSSMSISE 248

Query: 747 SEV-REKPYRLLDLNVK 794
            E   EK  R+L++N+K
Sbjct: 249 PEFNEEKACRVLNMNIK 265


>gb|AAX47176.1| expressed protein [Pisum sativum]
          Length = 265

 Score =  291 bits (746), Expect = 2e-76
 Identities = 155/262 (59%), Positives = 187/262 (71%), Gaps = 7/262 (2%)
 Frame = +3

Query: 39  SSSPASPNCKRTRDPEDEAYLDNFHSHKRYLSEIMASSLNGLSVGESMPENLIESPVRSE 218
           S S +SP  KRTRDPE+E Y+DN  SHKRYLSEIMASSLNGL+VG+S+P+NL+ESP RSE
Sbjct: 10  SPSSSSPTAKRTRDPEEEVYVDNLRSHKRYLSEIMASSLNGLTVGDSLPDNLLESPARSE 69

Query: 219 TMSYLRDDFSLQYSPMSEDSDDARYSETPLSTSMTPSDSLPTSPCSPHRHQRPHNGTASS 398
           +   LRDD SLQYSPMSEDSDD+R+ ETP+ + +T  DS P+SP SP R+QR  N  +S+
Sbjct: 70  SAFSLRDDISLQYSPMSEDSDDSRFCETPVHSCLTNLDSRPSSPVSPCRYQRQQNSFSSA 129

Query: 399 SYTSL----GCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRVQP 566
             TSL    G  +++V CSQPRQR SDS+GRFPSSPSDICHSADLRRAALLRSVQMR  P
Sbjct: 130 PSTSLNTSHGFPVSAVTCSQPRQRSSDSDGRFPSSPSDICHSADLRRAALLRSVQMRTHP 189

Query: 567 PALPSFELAFSPDQEPMQNMEPEDQPCSCGKSIVQECSCQNQQQIPDLFAEECSSIRDPD 746
           P   S EL F   QEP  N++ ED+PCS  KS+V E          D   EECSSI  P+
Sbjct: 190 PGSASLELPFGSGQEPAPNIDSEDRPCSYMKSLVDE---------RDYQIEECSSIGAPE 240

Query: 747 SEV---REKPYRLLDLNVKEVE 803
           +E      KP R+L++N K  +
Sbjct: 241 TEFNHDNNKPCRVLNMNPKAAD 262


>ref|XP_003591442.1| hypothetical protein MTR_1g087500 [Medicago truncatula]
           gi|355480490|gb|AES61693.1| hypothetical protein
           MTR_1g087500 [Medicago truncatula]
          Length = 264

 Score =  286 bits (731), Expect = 9e-75
 Identities = 154/261 (59%), Positives = 186/261 (71%), Gaps = 6/261 (2%)
 Frame = +3

Query: 39  SSSPASPNCKRTRDPEDEAYLDNFHSHKRYLSEIMASSLNGLSVGESMPENLIESPVRSE 218
           S S +SP+ KRTRDPE+E Y+DN  SHKRYLSEIMASSLNGL+VG+S+P+NL+ESP RSE
Sbjct: 10  SPSSSSPSSKRTRDPEEEVYVDNLRSHKRYLSEIMASSLNGLTVGDSLPDNLMESPARSE 69

Query: 219 TMSYLRDDFSLQYSPMSEDSDDARYSETPLSTSMTPSDSLPTSPCSPHRHQRPHNGTASS 398
           +   LRDD SLQYSPMSEDSDD+R+ ET L +  +  DS P SP SP R+QR  N  +S+
Sbjct: 70  SAFSLRDDMSLQYSPMSEDSDDSRFCETGLHSCSSHPDSRPGSPVSPCRYQRSQNTFSSA 129

Query: 399 SYTSL----GCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRVQP 566
             TSL    G ++++V CSQPRQR SDS+GRFPSSPSDICHSADLRRAALLRSVQMR  P
Sbjct: 130 PSTSLNGSHGFSVSAVTCSQPRQRSSDSDGRFPSSPSDICHSADLRRAALLRSVQMRTHP 189

Query: 567 PALPSFELAFSPDQEPMQNMEPEDQPCSCGKSIVQECSCQNQQQIPDLFAEECSSIRDPD 746
           P   S EL F   QEP  N++PE++PCS  KS+V E          D   EECS I  P+
Sbjct: 190 PGSASLELPFGSGQEPPPNIDPEERPCSYLKSMVDE---------RDYQIEECSPIGIPE 240

Query: 747 SEVR--EKPYRLLDLNVKEVE 803
            E     KP R+L++N KE +
Sbjct: 241 PEFNHDNKPCRVLNMNPKEAD 261


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