BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020820
         (1336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] re...   565   e-159
ref|XP_002310697.1| predicted protein [Populus trichocarpa] gi|2...   562   e-158
gb|AAM61498.1| NAD+ dependent isocitrate dehydrogenase subunit 1...   561   e-157
ref|NP_195252.1| Isocitrate dehydrogenase [NAD] regulatory subun...   561   e-157
ref|XP_002867081.1| hypothetical protein ARALYDRAFT_912853 [Arab...   560   e-157

>ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
            mitochondrial-like [Cucumis sativus]
          Length = 381

 Score =  565 bits (1457), Expect = e-159
 Identities = 286/336 (85%), Positives = 301/336 (89%)
 Frame = -3

Query: 1235 SRSITYMPRPGDGAPRPVTLIPGDGIGPLVTNAVEQIMSAMHAPIYFEKFQHVSGKMNKM 1056
            SRS+TYMPRPGDGAPR VTLIPGDGIGPLVT AVEQ+M AMHAP+YFEKF+ + G M K+
Sbjct: 37   SRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTGAVEQVMDAMHAPVYFEKFE-IHGDMKKV 95

Query: 1055 PDEVINSIKKNKVCLKGGLDTPVGGGVSSLNVQLRKELDLYASLVNCFNLPGLYMRHENV 876
            P EVI+SIKKNKVCLKGGL TPVGGGVSSLNVQLRKELDLYASLVNCFNLPGL  RHENV
Sbjct: 96   PQEVIDSIKKNKVCLKGGLVTPVGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHENV 155

Query: 875  DIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHK 696
            DIVVIRENTEGEY+GLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHK
Sbjct: 156  DIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHK 215

Query: 695  ANIMKLADGLFLESCREVAEKYPSIAYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLVX 516
            ANIMKLADGLFLESCREVA KYP I YNE+IVDNCCMQLV+KPEQFDVMVTPNLYGNLV 
Sbjct: 216  ANIMKLADGLFLESCREVATKYPGIKYNEVIVDNCCMQLVSKPEQFDVMVTPNLYGNLVA 275

Query: 515  XXXXXXXXXXXXXXXXXXGADHAIFEQGASAGNVGNEKLVVEKKANPVALLLSSAMMLRH 336
                              GADHA+FEQGASAGNVGNE+LV +KKANPVALLLSSAMMLRH
Sbjct: 276  NTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNERLVEQKKANPVALLLSSAMMLRH 335

Query: 335  LQFPSFADRLETAVKRVIAEGRYRTKDLGGQSTTQE 228
            LQFPSFADRLETAVK+VI EG+YRTKDLGGQSTTQE
Sbjct: 336  LQFPSFADRLETAVKKVIFEGKYRTKDLGGQSTTQE 371


>ref|XP_002310697.1| predicted protein [Populus trichocarpa] gi|222853600|gb|EEE91147.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  562 bits (1448), Expect = e-158
 Identities = 291/357 (81%), Positives = 308/357 (86%), Gaps = 5/357 (1%)
 Frame = -3

Query: 1283 MAKRIL--IKNLF---QTPHLSRSITYMPRPGDGAPRPVTLIPGDGIGPLVTNAVEQIMS 1119
            MA+R +  +K+L     TP L RS+TYMPRPGDGAPRPVTLIPGDGIGPLVTNAVEQ+M 
Sbjct: 1    MARRSIPVLKHLLTSSSTPTLRRSVTYMPRPGDGAPRPVTLIPGDGIGPLVTNAVEQVME 60

Query: 1118 AMHAPIYFEKFQHVSGKMNKMPDEVINSIKKNKVCLKGGLDTPVGGGVSSLNVQLRKELD 939
            AMHAP+YFEK+  + G M ++P EVI SIKKNKVCLKGGL TP+GGGVSSLNVQLRKELD
Sbjct: 61   AMHAPVYFEKYD-IHGDMMRVPSEVIESIKKNKVCLKGGLATPMGGGVSSLNVQLRKELD 119

Query: 938  LYASLVNCFNLPGLYMRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERI 759
            LYASLVNCFNL GL  RHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERI
Sbjct: 120  LYASLVNCFNLQGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERI 179

Query: 758  AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAEKYPSIAYNEIIVDNCCMQL 579
            AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVA KYP I YNEIIVDNCCMQL
Sbjct: 180  AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQL 239

Query: 578  VAKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXGADHAIFEQGASAGNVGNEKL 399
            V+KPEQFDVMVTPNLYGNLV                   GADHAIFEQGASAGNVGN+KL
Sbjct: 240  VSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAIFEQGASAGNVGNDKL 299

Query: 398  VVEKKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGRYRTKDLGGQSTTQE 228
            + +K ANPVALLLSSAMMLRHLQFPSFADRLETAVKRVI+E  YRTKDLGG STTQE
Sbjct: 300  LEQKTANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISESHYRTKDLGGTSTTQE 356


>gb|AAM61498.1| NAD+ dependent isocitrate dehydrogenase subunit 1 [Arabidopsis
            thaliana]
          Length = 367

 Score =  561 bits (1445), Expect = e-157
 Identities = 287/351 (81%), Positives = 309/351 (88%), Gaps = 4/351 (1%)
 Frame = -3

Query: 1268 LIKNLFQTPHLS----RSITYMPRPGDGAPRPVTLIPGDGIGPLVTNAVEQIMSAMHAPI 1101
            L+KNL +  + S    RS+TYMPRPGDGAPR VTLIPGDGIGPLVTNAVEQ+M AMHAPI
Sbjct: 8    LLKNLARNANGSGIQTRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTNAVEQVMEAMHAPI 67

Query: 1100 YFEKFQHVSGKMNKMPDEVINSIKKNKVCLKGGLDTPVGGGVSSLNVQLRKELDLYASLV 921
            +FEK+  V G+M+++P EV+ SI+KNKVCLKGGL TPVGGGVSSLNVQLRKELDL+ASLV
Sbjct: 68   FFEKYD-VHGEMSRVPPEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKELDLFASLV 126

Query: 920  NCFNLPGLYMRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFE 741
            NCFNLPGL  RHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVIT FCSERIAKYAFE
Sbjct: 127  NCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITNFCSERIAKYAFE 186

Query: 740  YAYLNNRKKVTAVHKANIMKLADGLFLESCREVAEKYPSIAYNEIIVDNCCMQLVAKPEQ 561
            YAYLNNRKKVTAVHKANIMKLADGLFLESCREVA+KYPSI YNEIIVDNCCMQLVAKPEQ
Sbjct: 187  YAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPSITYNEIIVDNCCMQLVAKPEQ 246

Query: 560  FDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXGADHAIFEQGASAGNVGNEKLVVEKKA 381
            FDVMVTPNLYGNLV                   GADHA+FEQGASAGNVG +K+V+E KA
Sbjct: 247  FDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGKDKIVLENKA 306

Query: 380  NPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGRYRTKDLGGQSTTQE 228
            NPVALLLSSAMMLRHLQFPSFADRLETAVK+VIAEG++RTKDLGG STTQE
Sbjct: 307  NPVALLLSSAMMLRHLQFPSFADRLETAVKKVIAEGKFRTKDLGGTSTTQE 357


>ref|NP_195252.1| Isocitrate dehydrogenase [NAD] regulatory subunit 1 [Arabidopsis
            thaliana] gi|122064253|sp|Q8LFC0.2|IDH1_ARATH RecName:
            Full=Isocitrate dehydrogenase [NAD] regulatory subunit 1,
            mitochondrial; AltName: Full=IDH-I; AltName:
            Full=Isocitric dehydrogenase 1; AltName:
            Full=NAD(+)-specific ICDH 1; Flags: Precursor
            gi|16226887|gb|AAL16290.1|AF428360_1 AT4g35260/F23E12_180
            [Arabidopsis thaliana] gi|3080424|emb|CAA18743.1| NAD+
            dependent isocitrate dehydrogenase subunit 1 [Arabidopsis
            thaliana] gi|7270478|emb|CAB80243.1| NAD+ dependent
            isocitrate dehydrogenase subunit 1 [Arabidopsis thaliana]
            gi|15146238|gb|AAK83602.1| AT4g35260/F23E12_180
            [Arabidopsis thaliana] gi|22136588|gb|AAM91080.1|
            AT4g35260/F23E12_180 [Arabidopsis thaliana]
            gi|332661086|gb|AEE86486.1| Isocitrate dehydrogenase
            [NAD] regulatory subunit 1 [Arabidopsis thaliana]
          Length = 367

 Score =  561 bits (1445), Expect = e-157
 Identities = 288/351 (82%), Positives = 309/351 (88%), Gaps = 4/351 (1%)
 Frame = -3

Query: 1268 LIKNLFQTPHLS----RSITYMPRPGDGAPRPVTLIPGDGIGPLVTNAVEQIMSAMHAPI 1101
            L+KNL +  + S    RS+TYMPRPGDGAPR VTLIPGDGIGPLVTNAVEQ+M AMHAPI
Sbjct: 8    LLKNLARNANGSGIQTRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTNAVEQVMEAMHAPI 67

Query: 1100 YFEKFQHVSGKMNKMPDEVINSIKKNKVCLKGGLDTPVGGGVSSLNVQLRKELDLYASLV 921
            +FEK+  V G+M+++P EV+ SI+KNKVCLKGGL TPVGGGVSSLNVQLRKELDL+ASLV
Sbjct: 68   FFEKYD-VHGEMSRVPPEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKELDLFASLV 126

Query: 920  NCFNLPGLYMRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFE 741
            NCFNLPGL  RHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFE
Sbjct: 127  NCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFE 186

Query: 740  YAYLNNRKKVTAVHKANIMKLADGLFLESCREVAEKYPSIAYNEIIVDNCCMQLVAKPEQ 561
            YAYLNNRKKVTAVHKANIMKLADGLFLESCREVA+KYPSI YNEIIVDNCCMQLVAKPEQ
Sbjct: 187  YAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPSITYNEIIVDNCCMQLVAKPEQ 246

Query: 560  FDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXGADHAIFEQGASAGNVGNEKLVVEKKA 381
            FDVMVTPNLYGNLV                   GADHA+FEQGASAGNVG +K+V+E KA
Sbjct: 247  FDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGKDKIVLENKA 306

Query: 380  NPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGRYRTKDLGGQSTTQE 228
            NPVALLLSSAMMLRHLQFPSFADRLETAVK+VIAEG+ RTKDLGG STTQE
Sbjct: 307  NPVALLLSSAMMLRHLQFPSFADRLETAVKKVIAEGKCRTKDLGGTSTTQE 357


>ref|XP_002867081.1| hypothetical protein ARALYDRAFT_912853 [Arabidopsis lyrata subsp.
            lyrata] gi|297312917|gb|EFH43340.1| hypothetical protein
            ARALYDRAFT_912853 [Arabidopsis lyrata subsp. lyrata]
          Length = 367

 Score =  560 bits (1444), Expect = e-157
 Identities = 288/351 (82%), Positives = 309/351 (88%), Gaps = 4/351 (1%)
 Frame = -3

Query: 1268 LIKNLFQTPHLS----RSITYMPRPGDGAPRPVTLIPGDGIGPLVTNAVEQIMSAMHAPI 1101
            L+KNL +  + S    RS+TYMPRPGDGAPR VTLIPGDGIGPLVTNAVEQ+M AMHAPI
Sbjct: 8    LLKNLARNANGSGFQTRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTNAVEQVMEAMHAPI 67

Query: 1100 YFEKFQHVSGKMNKMPDEVINSIKKNKVCLKGGLDTPVGGGVSSLNVQLRKELDLYASLV 921
            +FEK+  V G+M+++P EV+ SI+KNKVCLKGGL TPVGGGVSSLNVQLRKELDL+ASLV
Sbjct: 68   FFEKYD-VHGEMSRVPAEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKELDLFASLV 126

Query: 920  NCFNLPGLYMRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFE 741
            NCFNLPGL  RHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFE
Sbjct: 127  NCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFE 186

Query: 740  YAYLNNRKKVTAVHKANIMKLADGLFLESCREVAEKYPSIAYNEIIVDNCCMQLVAKPEQ 561
            YAYLNNRKKVTAVHKANIMKLADGLFLESCREVA+KYPSI YNEIIVDNCCMQLVAKPEQ
Sbjct: 187  YAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPSITYNEIIVDNCCMQLVAKPEQ 246

Query: 560  FDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXGADHAIFEQGASAGNVGNEKLVVEKKA 381
            FDVMVTPNLYGNLV                   GADHA+FEQGASAGNVG +K+V+E KA
Sbjct: 247  FDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGKDKIVLENKA 306

Query: 380  NPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGRYRTKDLGGQSTTQE 228
            NPVALLLSSAMMLRHLQFPSFADRLETAVK+VIAEG+ RTKDLGG STTQE
Sbjct: 307  NPVALLLSSAMMLRHLQFPSFADRLETAVKKVIAEGKCRTKDLGGTSTTQE 357