BLASTX nr result

ID: Coptis24_contig00020819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020819
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318439.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19
ref|XP_002526252.1| Glucan endo-1,3-beta-glucosidase precursor, ...    98   1e-18
ref|XP_002271991.2| PREDICTED: glucan endo-1,3-beta-glucosidase ...    97   1e-18
emb|CBI23036.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|NP_001031936.1| O-Glycosyl hydrolases family 17 protein [Ara...    91   9e-17

>ref|XP_002318439.1| predicted protein [Populus trichocarpa] gi|222859112|gb|EEE96659.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 44/68 (64%), Positives = 56/68 (82%)
 Frame = -1

Query: 204 FTALGVQGTIGVNYGTVANDIPPVEEVAHFLLQKTVINRVRLFDANPSTLRAFTHTGIEV 25
           F  LG +G+IGVNYGTVA+++PP  +VAHFLL+ T+INRVRLFD N   ++AF HTGI +
Sbjct: 23  FNILGAEGSIGVNYGTVADNLPPPAQVAHFLLESTIINRVRLFDTNTEIIQAFAHTGIAI 82

Query: 24  TITVPNEQ 1
           TITVPN+Q
Sbjct: 83  TITVPNDQ 90


>ref|XP_002526252.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis] gi|223534417|gb|EEF36121.1| Glucan
           endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis]
          Length = 476

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 43/64 (67%), Positives = 55/64 (85%)
 Frame = -1

Query: 192 GVQGTIGVNYGTVANDIPPVEEVAHFLLQKTVINRVRLFDANPSTLRAFTHTGIEVTITV 13
           G +GT+GVNYGTVAN++PP  +VA+FL++ T+INRVRLFD N   L+AF HTGIEVT+TV
Sbjct: 26  GAEGTLGVNYGTVANNLPPPAQVANFLVESTIINRVRLFDTNREILQAFAHTGIEVTVTV 85

Query: 12  PNEQ 1
           PN+Q
Sbjct: 86  PNDQ 89


>ref|XP_002271991.2| PREDICTED: glucan endo-1,3-beta-glucosidase 2-like [Vitis vinifera]
          Length = 874

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 44/62 (70%), Positives = 52/62 (83%)
 Frame = -1

Query: 189 VQGTIGVNYGTVANDIPPVEEVAHFLLQKTVINRVRLFDANPSTLRAFTHTGIEVTITVP 10
           V+G IGVNYGTVAND+PP  EVA FLL+ T INRVR+FDA+P  ++AF HTGI VT+TVP
Sbjct: 20  VEGNIGVNYGTVANDLPPPSEVARFLLESTTINRVRMFDADPEMIQAFAHTGIAVTVTVP 79

Query: 9   NE 4
           NE
Sbjct: 80  NE 81


>emb|CBI23036.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 44/62 (70%), Positives = 52/62 (83%)
 Frame = -1

Query: 189 VQGTIGVNYGTVANDIPPVEEVAHFLLQKTVINRVRLFDANPSTLRAFTHTGIEVTITVP 10
           V+G IGVNYGTVAND+PP  EVA FLL+ T INRVR+FDA+P  ++AF HTGI VT+TVP
Sbjct: 20  VEGNIGVNYGTVANDLPPPSEVARFLLESTTINRVRMFDADPEMIQAFAHTGIAVTVTVP 79

Query: 9   NE 4
           NE
Sbjct: 80  NE 81


>ref|NP_001031936.1| O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana]
           gi|332005907|gb|AED93290.1| O-Glycosyl hydrolases family
           17 protein [Arabidopsis thaliana]
          Length = 458

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 8/87 (9%)
 Frame = -1

Query: 237 NFVCAPNIIGFFTALGV--------QGTIGVNYGTVANDIPPVEEVAHFLLQKTVINRVR 82
           N+V     +  FT +GV        + +IGVNYGT+AN++PP ++VA FLL  TVINR+R
Sbjct: 2   NYVLPFFSLSMFTIVGVLLILSTGSEASIGVNYGTLANNLPPPQQVAEFLLHSTVINRIR 61

Query: 81  LFDANPSTLRAFTHTGIEVTITVPNEQ 1
           LFD +P  L+AF +TGI VT+TVPN+Q
Sbjct: 62  LFDTDPQILQAFANTGIAVTVTVPNDQ 88


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