BLASTX nr result

ID: Coptis24_contig00020804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020804
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285300.1| PREDICTED: uncharacterized protein LOC100267...   241   1e-61
ref|XP_004157853.1| PREDICTED: uncharacterized protein LOC101227...   209   4e-52
gb|AAN41286.1| unknown protein [Arabidopsis thaliana]                 207   2e-51
ref|NP_172400.2| uncharacterized protein [Arabidopsis thaliana] ...   207   2e-51
gb|AFK45566.1| unknown [Lotus japonicus]                              204   1e-50

>ref|XP_002285300.1| PREDICTED: uncharacterized protein LOC100267955 [Vitis vinifera]
           gi|296081413|emb|CBI16846.3| unnamed protein product
           [Vitis vinifera]
          Length = 337

 Score =  241 bits (614), Expect = 1e-61
 Identities = 127/217 (58%), Positives = 154/217 (70%), Gaps = 8/217 (3%)
 Frame = +3

Query: 114 MTPWEQHSAVISIPRFDYNAPSSLLQHSHSGFLITCPIKREKSATKEAISILSKYIQSLK 293
           M PWEQHSAVISIPRFDYNAPSSLL HSHSGFL+TC IKREKSATKEA+ IL KY+ S  
Sbjct: 10  MKPWEQHSAVISIPRFDYNAPSSLLDHSHSGFLVTCTIKREKSATKEAMPILEKYVGSFS 69

Query: 294 ENSFRSVEDLEKNVDLKRRKIILEETAHECANDVEIKGNTDNGLK---ETSSSSALVEAN 464
             S  S+E  + N   KRRKI  EE   EC N VE K  ++N  +   E S  + +  AN
Sbjct: 70  SCSSESLESSDANATTKRRKICTEEIDEECVNSVENKTASNNCGEDGGELSKDAGVSSAN 129

Query: 465 GEK-----EILSLVKLTRSGLLLFIFPKNNSSDSTDIVSQIFHSLESGNLKSLKWCHRIF 629
            +       +LSLVKLTRSGLLLF+FP+NNS D+ D+VSQI  SL+SG++K   WCHRIF
Sbjct: 130 RDAIVENGHVLSLVKLTRSGLLLFVFPRNNSVDTVDVVSQIIRSLQSGSVKPPLWCHRIF 189

Query: 630 PIQATCGLNENDLCAVVSNLLKLFLDSEQNKFQKPTK 740
           PIQATC L+E +L  VV+ L+  F+++EQNKF +P K
Sbjct: 190 PIQATCRLDEKELHEVVTKLVVQFVNNEQNKFARPIK 226


>ref|XP_004157853.1| PREDICTED: uncharacterized protein LOC101227649 [Cucumis sativus]
          Length = 345

 Score =  209 bits (533), Expect = 4e-52
 Identities = 120/211 (56%), Positives = 141/211 (66%), Gaps = 1/211 (0%)
 Frame = +3

Query: 111 VMTPWEQHSAVISIPRFDYNAPSSLLQHSHSGFLITCPIKREKSATKEAISILSKYIQSL 290
           +MTPWEQHSAVISIPRFDYNAPS+LL    +GFLITC IKREKSATKEAISIL KY+Q  
Sbjct: 33  MMTPWEQHSAVISIPRFDYNAPSALLHRCQTGFLITCTIKREKSATKEAISILQKYVQYF 92

Query: 291 KENSFRSVEDLEKNVDLKRRKIILEETAHECANDVEIKGNTDNGLKETSSSSALVEANGE 470
             +   ++   ++N   KRRK + E+  H     V  + +TD   KETS  S   EA  E
Sbjct: 93  NSSMSETLVVSDENETSKRRK-VSEDVDH---RSVGGESSTDEHAKETSLISTKSEAKVE 148

Query: 471 K-EILSLVKLTRSGLLLFIFPKNNSSDSTDIVSQIFHSLESGNLKSLKWCHRIFPIQATC 647
           K   +SLVKLTRSGLLLF F K+ S D+  IV  I  SLE+  LKSL WCHRIFPIQATC
Sbjct: 149 KCSPISLVKLTRSGLLLFTFTKDISPDTVYIVKDIMQSLEARTLKSLAWCHRIFPIQATC 208

Query: 648 GLNENDLCAVVSNLLKLFLDSEQNKFQKPTK 740
            LNENDL  VVS L+  F++ + N    P K
Sbjct: 209 SLNENDLQGVVSKLVLHFMNDKGNILSHPVK 239


>gb|AAN41286.1| unknown protein [Arabidopsis thaliana]
          Length = 373

 Score =  207 bits (526), Expect = 2e-51
 Identities = 108/210 (51%), Positives = 142/210 (67%), Gaps = 1/210 (0%)
 Frame = +3

Query: 114 MTPWEQHSAVISIPRFDYNAPSSLLQHSHSGFLITCPIKREKSATKEAISILSKYIQSLK 293
           +TPWEQHS++ISIPRFDY APSSLL HSHSGFL+TC IKREKSATKE +SIL KYI S+ 
Sbjct: 57  LTPWEQHSSIISIPRFDYKAPSSLLHHSHSGFLVTCNIKREKSATKEVMSILGKYIGSMH 116

Query: 294 ENSFRSVEDLEKNVDLKRRKIILEETAHECANDVEIKGNTDNGLKETSSSSALVEANGE- 470
           E       ++  +   K++K+  +ET       V ++ +      E  +   L  AN E 
Sbjct: 117 EEK----PEVLNSTASKKQKVCAQETEEGGEKTVPLENDALQETGENPNVEDLKLANEEH 172

Query: 471 KEILSLVKLTRSGLLLFIFPKNNSSDSTDIVSQIFHSLESGNLKSLKWCHRIFPIQATCG 650
             ++SLVKLT+SGLLLF FP  NS ++T+IVS++F S+ESG LK+  WCHRIFP+QATCG
Sbjct: 173 NSLMSLVKLTKSGLLLFTFPVENSPNTTNIVSRVFQSMESGALKAPIWCHRIFPVQATCG 232

Query: 651 LNENDLCAVVSNLLKLFLDSEQNKFQKPTK 740
           L E +L   VS L++ F++ + N   KP K
Sbjct: 233 LTEKELRETVSKLVQRFVNDKDNTLSKPVK 262


>ref|NP_172400.2| uncharacterized protein [Arabidopsis thaliana]
           gi|14334964|gb|AAK59659.1| unknown protein [Arabidopsis
           thaliana] gi|332190304|gb|AEE28425.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 348

 Score =  207 bits (526), Expect = 2e-51
 Identities = 108/210 (51%), Positives = 142/210 (67%), Gaps = 1/210 (0%)
 Frame = +3

Query: 114 MTPWEQHSAVISIPRFDYNAPSSLLQHSHSGFLITCPIKREKSATKEAISILSKYIQSLK 293
           +TPWEQHS++ISIPRFDY APSSLL HSHSGFL+TC IKREKSATKE +SIL KYI S+ 
Sbjct: 32  LTPWEQHSSIISIPRFDYKAPSSLLHHSHSGFLVTCNIKREKSATKEVMSILGKYIGSMH 91

Query: 294 ENSFRSVEDLEKNVDLKRRKIILEETAHECANDVEIKGNTDNGLKETSSSSALVEANGE- 470
           E       ++  +   K++K+  +ET       V ++ +      E  +   L  AN E 
Sbjct: 92  EEK----PEVLNSTASKKQKVCAQETEEGGEKTVPLENDALQETGENPNVEDLKLANEEH 147

Query: 471 KEILSLVKLTRSGLLLFIFPKNNSSDSTDIVSQIFHSLESGNLKSLKWCHRIFPIQATCG 650
             ++SLVKLT+SGLLLF FP  NS ++T+IVS++F S+ESG LK+  WCHRIFP+QATCG
Sbjct: 148 NSLMSLVKLTKSGLLLFTFPVENSPNTTNIVSRVFQSMESGALKAPIWCHRIFPVQATCG 207

Query: 651 LNENDLCAVVSNLLKLFLDSEQNKFQKPTK 740
           L E +L   VS L++ F++ + N   KP K
Sbjct: 208 LTEKELRETVSKLVQRFVNDKDNTLSKPVK 237


>gb|AFK45566.1| unknown [Lotus japonicus]
          Length = 369

 Score =  204 bits (520), Expect = 1e-50
 Identities = 109/212 (51%), Positives = 138/212 (65%), Gaps = 2/212 (0%)
 Frame = +3

Query: 111 VMTPWEQHSAVISIPRFDYNAPSSLLQHSHSGFLITCPIKREKSATKEAISILSKYIQSL 290
           +MTPWEQHS VI + R+DYN P+SLL HSHSGFLITC IKREKSATKEA+SIL K++ + 
Sbjct: 49  MMTPWEQHSGVIKLSRYDYNTPASLLLHSHSGFLITCTIKREKSATKEALSILEKFVGAF 108

Query: 291 KENSFRSVEDLEKNVDLKRRKIILEETAHECANDVEIKGNTDNGLKETSSSSALVEANGE 470
               F   ++  +    KR ++  ++   EC +  E +  TDN       S A  EA  +
Sbjct: 109 NAGGFECSKNPGEYSSFKRMRVDTQDIGGECLDVKETESVTDNSGDGKVLSPAKAEAEDK 168

Query: 471 KEI--LSLVKLTRSGLLLFIFPKNNSSDSTDIVSQIFHSLESGNLKSLKWCHRIFPIQAT 644
             +  LSLVKLTR+GLLLFI+P N   D+ +IVS I  SLESG+     WCHRIFPIQAT
Sbjct: 169 DGVTDLSLVKLTRNGLLLFIYPNNMFPDTVNIVSNIIQSLESGSTSLPVWCHRIFPIQAT 228

Query: 645 CGLNENDLCAVVSNLLKLFLDSEQNKFQKPTK 740
           C LNE +   VVS L+K FL S+Q K ++P K
Sbjct: 229 CRLNEKEFQEVVSMLVKKFLASKQGKLERPLK 260


Top