BLASTX nr result

ID: Coptis24_contig00020801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020801
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264591.1| PREDICTED: uncharacterized membrane protein ...   150   2e-34
ref|XP_002264502.1| PREDICTED: uncharacterized membrane protein ...   150   2e-34
ref|XP_002321139.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
ref|XP_002317144.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_002457968.1| hypothetical protein SORBIDRAFT_03g023990 [S...   144   2e-32

>ref|XP_002264591.1| PREDICTED: uncharacterized membrane protein C24H6.13 isoform 2
           [Vitis vinifera]
          Length = 766

 Score =  150 bits (380), Expect = 2e-34
 Identities = 71/114 (62%), Positives = 86/114 (75%)
 Frame = -3

Query: 416 QIEAERERIISNPKSIMPATFVSFKSRWGAVVSAQTQ*SRDPTMWLTEWAPEPRDVYWHN 237
           +I  ERER+ ++PKSIMPA FVSFK+RWGA V AQTQ SR+PT+WLTEWAPEPRDVYWHN
Sbjct: 302 EISVERERVANDPKSIMPAAFVSFKTRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVYWHN 361

Query: 236 LVVPFVTLTIRRLXXXXXXXXXXXXXXXXXXFVQSLANITGIEKAAPFLKPLVQ 75
           L +PFV+LT+RRL                  FVQSLA+I GIEKA PFL+P+++
Sbjct: 362 LAIPFVSLTVRRLIIAVAFFFLTFFYMIPIAFVQSLASIEGIEKAVPFLRPIIE 415


>ref|XP_002264502.1| PREDICTED: uncharacterized membrane protein C24H6.13 isoform 1
           [Vitis vinifera] gi|302144095|emb|CBI23200.3| unnamed
           protein product [Vitis vinifera]
          Length = 771

 Score =  150 bits (380), Expect = 2e-34
 Identities = 71/114 (62%), Positives = 86/114 (75%)
 Frame = -3

Query: 416 QIEAERERIISNPKSIMPATFVSFKSRWGAVVSAQTQ*SRDPTMWLTEWAPEPRDVYWHN 237
           +I  ERER+ ++PKSIMPA FVSFK+RWGA V AQTQ SR+PT+WLTEWAPEPRDVYWHN
Sbjct: 302 EISVERERVANDPKSIMPAAFVSFKTRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVYWHN 361

Query: 236 LVVPFVTLTIRRLXXXXXXXXXXXXXXXXXXFVQSLANITGIEKAAPFLKPLVQ 75
           L +PFV+LT+RRL                  FVQSLA+I GIEKA PFL+P+++
Sbjct: 362 LAIPFVSLTVRRLIIAVAFFFLTFFYMIPIAFVQSLASIEGIEKAVPFLRPIIE 415


>ref|XP_002321139.1| predicted protein [Populus trichocarpa] gi|222861912|gb|EEE99454.1|
           predicted protein [Populus trichocarpa]
          Length = 768

 Score =  147 bits (372), Expect = 1e-33
 Identities = 71/114 (62%), Positives = 85/114 (74%)
 Frame = -3

Query: 416 QIEAERERIISNPKSIMPATFVSFKSRWGAVVSAQTQ*SRDPTMWLTEWAPEPRDVYWHN 237
           +I  ER++I++NPKSIMPA FVSFK+RWGA V AQTQ SR+PT+WLT WAPEPRDVYW N
Sbjct: 300 EISLERDKIVNNPKSIMPAAFVSFKTRWGAAVCAQTQQSRNPTIWLTGWAPEPRDVYWDN 359

Query: 236 LVVPFVTLTIRRLXXXXXXXXXXXXXXXXXXFVQSLANITGIEKAAPFLKPLVQ 75
           L +PFV+LT+RRL                  FVQSLANI GIEKA PFLKP+++
Sbjct: 360 LAIPFVSLTLRRLVIAVAFFFLTFFFMIPIAFVQSLANIEGIEKALPFLKPIIE 413


>ref|XP_002317144.1| predicted protein [Populus trichocarpa] gi|222860209|gb|EEE97756.1|
           predicted protein [Populus trichocarpa]
          Length = 772

 Score =  144 bits (364), Expect = 1e-32
 Identities = 66/114 (57%), Positives = 85/114 (74%)
 Frame = -3

Query: 416 QIEAERERIISNPKSIMPATFVSFKSRWGAVVSAQTQ*SRDPTMWLTEWAPEPRDVYWHN 237
           +IE ERE+++ +PKSIMPA FVSFK+RWGA V AQTQ SR+PT+WLTEWAPEPRDVYW N
Sbjct: 304 EIEEEREKVLKDPKSIMPAAFVSFKTRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVYWEN 363

Query: 236 LVVPFVTLTIRRLXXXXXXXXXXXXXXXXXXFVQSLANITGIEKAAPFLKPLVQ 75
           L +P+++L++RRL                   VQ+LA+I GIEK APFLKP+++
Sbjct: 364 LAIPYMSLSVRRLIIGVAFFFLTFFFMIPIASVQALASIEGIEKKAPFLKPIIE 417


>ref|XP_002457968.1| hypothetical protein SORBIDRAFT_03g023990 [Sorghum bicolor]
           gi|241929943|gb|EES03088.1| hypothetical protein
           SORBIDRAFT_03g023990 [Sorghum bicolor]
          Length = 768

 Score =  144 bits (363), Expect = 2e-32
 Identities = 69/110 (62%), Positives = 83/110 (75%)
 Frame = -3

Query: 404 ERERIISNPKSIMPATFVSFKSRWGAVVSAQTQ*SRDPTMWLTEWAPEPRDVYWHNLVVP 225
           ERE+I+ +PKS++PA FVSF+SRWGA V AQTQ + +PT+WLTEWAPEPRDVYW NL +P
Sbjct: 304 EREKIVKDPKSVVPAAFVSFRSRWGAAVCAQTQQTSNPTVWLTEWAPEPRDVYWDNLSIP 363

Query: 224 FVTLTIRRLXXXXXXXXXXXXXXXXXXFVQSLANITGIEKAAPFLKPLVQ 75
           FV+LT+RRL                  FVQSLANI GIEKAAPFLKPL++
Sbjct: 364 FVSLTVRRLIVAVAFFFLNFFYVIPIAFVQSLANIEGIEKAAPFLKPLIE 413


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