BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020788
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU56179.1| transcription initiation factor TFIID subunit [Ja...   159   2e-37
ref|XP_002275358.1| PREDICTED: transcription initiation factor T...   155   2e-36
ref|XP_002515305.1| Transcription initiation factor TFIID subuni...   155   4e-36
ref|XP_002320312.1| predicted protein [Populus trichocarpa] gi|2...   154   6e-36
gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]     151   5e-35

>gb|ADU56179.1| transcription initiation factor TFIID subunit [Jatropha curcas]
          Length = 128

 Score =  159 bits (402), Expect = 2e-37
 Identities = 81/99 (81%), Positives = 87/99 (87%)
 Frame = -1

Query: 298 NSTTGGNSASKSKAGTSQPSDTTSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLEDI 119
           N+ + G S SKSK GTSQPS+T SFKRKRGVFQKDLQHMMYGFGDDPNPLPETVAL+EDI
Sbjct: 2   NNLSAGPS-SKSKVGTSQPSET-SFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDI 59

Query: 118 AVEYVTDLVNKAQDVASKRGKLLTEDFLYLIRKDRPKFN 2
            VEYVTDL +KAQD+ SKRGKLL EDFLYLIRKD PK N
Sbjct: 60  VVEYVTDLAHKAQDIGSKRGKLLVEDFLYLIRKDLPKLN 98


>ref|XP_002275358.1| PREDICTED: transcription initiation factor TFIID subunit 13-like
           isoform 3 [Vitis vinifera]
           gi|225437519|ref|XP_002275335.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 2 [Vitis vinifera]
           gi|225437521|ref|XP_002275286.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 1 [Vitis vinifera]
           gi|359480146|ref|XP_003632408.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           [Vitis vinifera]
          Length = 128

 Score =  155 bits (393), Expect = 2e-36
 Identities = 80/99 (80%), Positives = 89/99 (89%)
 Frame = -1

Query: 298 NSTTGGNSASKSKAGTSQPSDTTSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLEDI 119
           NS++ G S SK +AG+SQPSD+ SFKRKRGVFQKDLQHMMYGFGDD NPLPETVALLEDI
Sbjct: 2   NSSSAGPS-SKPRAGSSQPSDS-SFKRKRGVFQKDLQHMMYGFGDDANPLPETVALLEDI 59

Query: 118 AVEYVTDLVNKAQDVASKRGKLLTEDFLYLIRKDRPKFN 2
            VEYVTDLV+KAQ+ ASKRGKLLTEDFL+L+RKD PK N
Sbjct: 60  VVEYVTDLVHKAQETASKRGKLLTEDFLFLMRKDLPKLN 98


>ref|XP_002515305.1| Transcription initiation factor TFIID subunit, putative [Ricinus
           communis] gi|223545785|gb|EEF47289.1| Transcription
           initiation factor TFIID subunit, putative [Ricinus
           communis]
          Length = 128

 Score =  155 bits (391), Expect = 4e-36
 Identities = 79/101 (78%), Positives = 87/101 (86%)
 Frame = -1

Query: 304 MQNSTTGGNSASKSKAGTSQPSDTTSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLE 125
           M +S TG   +SKSK G+SQPS+T SFKRKRGVFQKDLQHMMYGFGDDPNPLPE+VAL+E
Sbjct: 1   MSSSFTG--PSSKSKVGSSQPSET-SFKRKRGVFQKDLQHMMYGFGDDPNPLPESVALVE 57

Query: 124 DIAVEYVTDLVNKAQDVASKRGKLLTEDFLYLIRKDRPKFN 2
           DI VEYVTDL +KAQD+ SKRGKL  EDFLYLIRKD PK N
Sbjct: 58  DIVVEYVTDLAHKAQDIGSKRGKLSVEDFLYLIRKDLPKLN 98


>ref|XP_002320312.1| predicted protein [Populus trichocarpa] gi|222861085|gb|EEE98627.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  154 bits (390), Expect = 6e-36
 Identities = 76/101 (75%), Positives = 86/101 (85%)
 Frame = -1

Query: 304 MQNSTTGGNSASKSKAGTSQPSDTTSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLE 125
           M NS+TG  S+SKSKAG+S     TSFKRKRG+FQKDLQHMMYGFGDDPNPLPETVAL+E
Sbjct: 1   MNNSSTG--SSSKSKAGSSSQPSETSFKRKRGMFQKDLQHMMYGFGDDPNPLPETVALVE 58

Query: 124 DIAVEYVTDLVNKAQDVASKRGKLLTEDFLYLIRKDRPKFN 2
           DI VEYVTD+ +KAQ++ SKRGKL  EDFL+LIRKD PK N
Sbjct: 59  DIVVEYVTDMAHKAQEIGSKRGKLSVEDFLFLIRKDPPKLN 99


>gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]
          Length = 130

 Score =  151 bits (382), Expect = 5e-35
 Identities = 76/101 (75%), Positives = 89/101 (88%)
 Frame = -1

Query: 304 MQNSTTGGNSASKSKAGTSQPSDTTSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALLE 125
           M NS+ G   +SK++AG SQPS++ S KRKRG+FQKDLQHMMYGFGDD NPLPETVAL+E
Sbjct: 1   MNNSSAG--PSSKARAGASQPSES-SLKRKRGMFQKDLQHMMYGFGDDSNPLPETVALVE 57

Query: 124 DIAVEYVTDLVNKAQDVASKRGKLLTEDFLYLIRKDRPKFN 2
           DI V+YVTD+V+KAQDVA+KRGKLLTEDFL+LIRKD PK N
Sbjct: 58  DIVVDYVTDMVHKAQDVATKRGKLLTEDFLFLIRKDLPKLN 98