BLASTX nr result

ID: Coptis24_contig00020773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020773
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278183.2| PREDICTED: uncharacterized protein LOC100264...   203   3e-50
ref|XP_002323912.1| predicted protein [Populus trichocarpa] gi|2...   195   1e-47
ref|XP_002524849.1| nucleic acid binding protein, putative [Rici...   192   8e-47
ref|XP_003608102.1| hypothetical protein MTR_4g087630 [Medicago ...   190   3e-46
ref|XP_002309742.1| predicted protein [Populus trichocarpa] gi|2...   189   7e-46

>ref|XP_002278183.2| PREDICTED: uncharacterized protein LOC100264609 [Vitis vinifera]
           gi|296084320|emb|CBI24708.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score =  203 bits (517), Expect = 3e-50
 Identities = 112/198 (56%), Positives = 126/198 (63%), Gaps = 1/198 (0%)
 Frame = -3

Query: 704 MGKNQAYKAMQKARSGSSSAGPDDVEDGMIDGTFHSPEWHAARLASLKTSHTVTWEEFKR 525
           MGKNQAYKAMQ+AR GSSS GP+++EDGM+DG+FHSPEWHAARLASLKTSHT+TWEEFK+
Sbjct: 1   MGKNQAYKAMQRARLGSSSTGPEEIEDGMVDGSFHSPEWHAARLASLKTSHTITWEEFKK 60

Query: 524 KQKEDELKKGELEADKDKMMREYRAQLDAERESKLANGRNHSSSKTNNXXXXXXXXXXXX 345
           KQKEDEL+KGELEADKDKMMREYRAQLDAER SKLA+GRNHSSSK+N+            
Sbjct: 61  KQKEDELRKGELEADKDKMMREYRAQLDAERASKLAHGRNHSSSKSNHKKDRKDKDFKKR 120

Query: 344 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVEIXXXXXXXXXXXXXXXXXXXXKHS-SDS 168
                                        E E                     KHS SD 
Sbjct: 121 SSKKRKHSRRRSSESSSSSSSSESSSEDEERESRRAKSRSKRTKKEKKHRSKSKHSISDD 180

Query: 167 EESDGPLPLSRFFGIAKS 114
            E +GPLPLS+FF  AKS
Sbjct: 181 SEGNGPLPLSKFFESAKS 198


>ref|XP_002323912.1| predicted protein [Populus trichocarpa] gi|222866914|gb|EEF04045.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  195 bits (495), Expect = 1e-47
 Identities = 103/197 (52%), Positives = 122/197 (61%)
 Frame = -3

Query: 704 MGKNQAYKAMQKARSGSSSAGPDDVEDGMIDGTFHSPEWHAARLASLKTSHTVTWEEFKR 525
           MGKNQAYKAMQ++R GSSSAGP+++EDGM+DG+FHSPEWHAARLASL  SHTVTWEEFK+
Sbjct: 1   MGKNQAYKAMQRSRLGSSSAGPEEIEDGMVDGSFHSPEWHAARLASLNKSHTVTWEEFKK 60

Query: 524 KQKEDELKKGELEADKDKMMREYRAQLDAERESKLANGRNHSSSKTNNXXXXXXXXXXXX 345
           KQKEDE++ GELEADKD+MMREYRAQLDAER  KLA+GRNHS SK+++            
Sbjct: 61  KQKEDEMRNGELEADKDRMMREYRAQLDAERAHKLAHGRNHSGSKSSHKKDRKDRDLKKR 120

Query: 344 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVEIXXXXXXXXXXXXXXXXXXXXKHSSDSE 165
                                        E E+                      SSD E
Sbjct: 121 RSKKRKHSRRRSDDSSSSSSSSDSSSSEDERELKRSKSKSRKTKEKKHKSRPKHSSSDDE 180

Query: 164 ESDGPLPLSRFFGIAKS 114
           E+ GP+PLSRFFG  K+
Sbjct: 181 EAGGPVPLSRFFGSLKN 197


>ref|XP_002524849.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223535812|gb|EEF37473.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 199

 Score =  192 bits (488), Expect = 8e-47
 Identities = 90/108 (83%), Positives = 102/108 (94%)
 Frame = -3

Query: 704 MGKNQAYKAMQKARSGSSSAGPDDVEDGMIDGTFHSPEWHAARLASLKTSHTVTWEEFKR 525
           MGKNQAYKAMQ+AR GSSSAGP++VEDGM+DG+FH+P WHAARLASL TSHTVTWEEFKR
Sbjct: 1   MGKNQAYKAMQRARLGSSSAGPEEVEDGMVDGSFHTPAWHAARLASLNTSHTVTWEEFKR 60

Query: 524 KQKEDELKKGELEADKDKMMREYRAQLDAERESKLANGRNHSSSKTNN 381
           KQKEDE++KGELEAD D+MMREYRAQLDAER  KLA+GRNHSSSK+N+
Sbjct: 61  KQKEDEIRKGELEADTDRMMREYRAQLDAERARKLAHGRNHSSSKSNH 108


>ref|XP_003608102.1| hypothetical protein MTR_4g087630 [Medicago truncatula]
           gi|355509157|gb|AES90299.1| hypothetical protein
           MTR_4g087630 [Medicago truncatula]
          Length = 201

 Score =  190 bits (483), Expect = 3e-46
 Identities = 88/108 (81%), Positives = 100/108 (92%)
 Frame = -3

Query: 704 MGKNQAYKAMQKARSGSSSAGPDDVEDGMIDGTFHSPEWHAARLASLKTSHTVTWEEFKR 525
           MGKNQAYKAMQ+AR G +S GPD+VEDGM+DG+FHSPEWHAARLASLKTSHT+TWEE+K+
Sbjct: 1   MGKNQAYKAMQRARLGGASGGPDEVEDGMVDGSFHSPEWHAARLASLKTSHTITWEEYKK 60

Query: 524 KQKEDELKKGELEADKDKMMREYRAQLDAERESKLANGRNHSSSKTNN 381
           KQKE+ELKKGELEAD DKMMREYRAQLDAER  KL+ GRNHSSSK+ +
Sbjct: 61  KQKEEELKKGELEADADKMMREYRAQLDAERSRKLSQGRNHSSSKSKH 108


>ref|XP_002309742.1| predicted protein [Populus trichocarpa] gi|222852645|gb|EEE90192.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  189 bits (480), Expect = 7e-46
 Identities = 86/108 (79%), Positives = 102/108 (94%)
 Frame = -3

Query: 704 MGKNQAYKAMQKARSGSSSAGPDDVEDGMIDGTFHSPEWHAARLASLKTSHTVTWEEFKR 525
           MGKNQAYKAMQ+AR GSSS GP+++EDGM+DG+FHSPEWHAARLASL T+HTVTWEE+K+
Sbjct: 1   MGKNQAYKAMQRARLGSSSGGPEEIEDGMVDGSFHSPEWHAARLASLNTTHTVTWEEYKK 60

Query: 524 KQKEDELKKGELEADKDKMMREYRAQLDAERESKLANGRNHSSSKTNN 381
           KQKEDE++KGELEADKD+MMREYRAQLDAER  KLA+GRNHS SK+++
Sbjct: 61  KQKEDEMRKGELEADKDRMMREYRAQLDAERARKLAHGRNHSGSKSSH 108


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