BLASTX nr result

ID: Coptis24_contig00020769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020769
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ08213.1| hypothetical protein OsI_30472 [Oryza sativa Indi...    77   2e-12
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    76   2e-12
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...    75   4e-12
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]    74   1e-11
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...    74   2e-11

>gb|EAZ08213.1| hypothetical protein OsI_30472 [Oryza sativa Indica Group]
          Length = 398

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 32/76 (42%), Positives = 48/76 (63%)
 Frame = +1

Query: 55  WWGSHANGSPKMHYMNWSKCCMKKSFGGYDFKNLYFQNKALIAKTCWHILTEPHLSWVTV 234
           WW S  + + K+H+++W K  M K  GG  F++L+  N A++A+  W +LT P      V
Sbjct: 21  WWWSQQDKTNKIHWLSWEKLTMSKENGGLGFRDLHLFNIAMLARQAWRLLTNPGTLCARV 80

Query: 235 LKAKYFPNTDFLHAKA 282
           LKAKY+P+TD LH+ A
Sbjct: 81  LKAKYYPHTDVLHSSA 96


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/75 (46%), Positives = 45/75 (60%)
 Frame = +1

Query: 52   FWWGSHANGSPKMHYMNWSKCCMKKSFGGYDFKNLYFQNKALIAKTCWHILTEPHLSWVT 231
            FWWGS ++   K+H+ NW   C  K FGG  FK+L   N AL+ +  W +  EP      
Sbjct: 829  FWWGS-SDTQRKIHWKNWDSMCNLKCFGGMGFKDLTIFNDALLGRQAWRLTREPQSLLGR 887

Query: 232  VLKAKYFPNTDFLHA 276
            V+KAKYFPN DFL+A
Sbjct: 888  VMKAKYFPNCDFLNA 902


>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
           gi|241922442|gb|EER95586.1| hypothetical protein
           SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/91 (37%), Positives = 53/91 (58%)
 Frame = +1

Query: 10  SKEACHPIDQLQDDFWWGSHANGSPKMHYMNWSKCCMKKSFGGYDFKNLYFQNKALIAKT 189
           +K  C  +  +   +WW S  + + K+H+++W K  + K  GG  F++LY  N A++A+ 
Sbjct: 235 TKSFCDDLSSMVGRYWW-SEQDKTNKIHWLSWEKLTLSKKRGGLGFRDLYHFNLAMLARQ 293

Query: 190 CWHILTEPHLSWVTVLKAKYFPNTDFLHAKA 282
            W IL EP      VLKA+YFPN++ L  KA
Sbjct: 294 AWRILIEPDTLCGRVLKARYFPNSNILQCKA 324


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 28/83 (33%), Positives = 54/83 (65%)
 Frame = +1

Query: 31  IDQLQDDFWWGSHANGSPKMHYMNWSKCCMKKSFGGYDFKNLYFQNKALIAKTCWHILTE 210
           + ++ + FWWG  ++G  ++++++W K C++K  GG  F+NL   N A++ K  W+++T+
Sbjct: 219 LQKMMNSFWWGPKSDGGRRINWLSWDKLCLRKEEGGLGFRNLRDFNLAMLGKQGWNLITK 278

Query: 211 PHLSWVTVLKAKYFPNTDFLHAK 279
           P      +LKA+Y+ + DFL A+
Sbjct: 279 PDSLIARLLKARYYCSRDFLSAR 301


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/85 (38%), Positives = 46/85 (54%)
 Frame = +1

Query: 22  CHPIDQLQDDFWWGSHANGSPKMHYMNWSKCCMKKSFGGYDFKNLYFQNKALIAKTCWHI 201
           CH I+ +  +FWW      + K+H+ +W + C  K  GG  F+ L   N AL+AK CW +
Sbjct: 64  CHEIESMVCNFWWXQKEE-TRKIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQCWRL 122

Query: 202 LTEPHLSWVTVLKAKYFPNTDFLHA 276
           +  P      V KA+YFP T FL A
Sbjct: 123 VQRPQSLVARVFKARYFPQTSFLDA 147


Top