BLASTX nr result

ID: Coptis24_contig00020762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020762
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEN71548.1| terminal EAR1-like 2 [Physcomitrella patens]            56   3e-06
ref|XP_001778423.1| predicted protein [Physcomitrella patens sub...    56   3e-06

>gb|AEN71548.1| terminal EAR1-like 2 [Physcomitrella patens]
          Length = 1029

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = +3

Query: 3    VCNITHDRIQGREKLTKNFDCSWFACHTDEFLLTVFTPPRNGAEST 140
            VC++T+ R+QGR  L ++F  S FAC TD++L  +F PPRNG +ST
Sbjct: 906  VCHVTYARVQGRAALEEHFKNSRFACDTDDYLPLMFRPPRNGVDST 951


>ref|XP_001778423.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162670208|gb|EDQ56781.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 434

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = +3

Query: 3   VCNITHDRIQGREKLTKNFDCSWFACHTDEFLLTVFTPPRNGAEST 140
           VC++T+ R+QGR  L ++F  S FAC TD++L  +F PPRNG +ST
Sbjct: 384 VCHVTYARVQGRAALEEHFKNSRFACDTDDYLPLMFRPPRNGVDST 429


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