BLASTX nr result

ID: Coptis24_contig00020757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020757
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...   100   9e-20
ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819...    94   1e-17
ref|XP_003551192.1| PREDICTED: uncharacterized protein LOC100784...    93   2e-17
ref|XP_002332238.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17

>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
            gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
            [Medicago truncatula]
          Length = 892

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/93 (53%), Positives = 66/93 (70%)
 Frame = +2

Query: 2    DFCATSLMMLDNELENFIFDVRSSKDFLELEGISDLAKKMVDTKRNIVYPLVYSXXXXXX 181
            +F  TSL++LD++LE +IFD+R S +F  L+GISDL+KKMV  K++I YPLVY       
Sbjct: 766  EFSPTSLVLLDSQLETYIFDMRRSVEFASLKGISDLSKKMVALKKHIDYPLVYGLLKLAM 825

Query: 182  XXXXXXXXVERAFSAMHIIKARLRNRIGDMWLN 280
                    VERAFSAM I+K+RLRNR+GD W+N
Sbjct: 826  ILPVATSTVERAFSAMKIVKSRLRNRMGDDWMN 858


>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 43/93 (46%), Positives = 63/93 (67%)
 Frame = +2

Query: 2   DFCATSLMMLDNELENFIFDVRSSKDFLELEGISDLAKKMVDTKRNIVYPLVYSXXXXXX 181
           +F    LM+L ++L+ +I D+R   +F ++EGI+ LA+KMV TK+N+++PLVY       
Sbjct: 662 EFSIVDLMILGDQLDTYIIDLRGDDEFSDIEGIASLAEKMVKTKKNLIFPLVYMLIKLSL 721

Query: 182 XXXXXXXXVERAFSAMHIIKARLRNRIGDMWLN 280
                   VER FSAMHI+K+RLRNR+GD W+N
Sbjct: 722 LLPVATATVERVFSAMHIVKSRLRNRMGDKWMN 754


>ref|XP_003536992.1| PREDICTED: uncharacterized protein LOC100819269 [Glycine max]
          Length = 557

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/93 (49%), Positives = 65/93 (69%)
 Frame = +2

Query: 2   DFCATSLMMLDNELENFIFDVRSSKDFLELEGISDLAKKMVDTKRNIVYPLVYSXXXXXX 181
           +F A +L+MLDN+LE +I D+RS+ +   L+GI +L++K+V+T R+IVYPLVY       
Sbjct: 431 EFSAINLVMLDNQLETYIIDMRSNVELSFLKGIKNLSEKLVETGRHIVYPLVYLLLKLAM 490

Query: 182 XXXXXXXXVERAFSAMHIIKARLRNRIGDMWLN 280
                   +ERAFSAM I+K RLRNR+GD W+N
Sbjct: 491 ILPVATSTMERAFSAMKIVKNRLRNRLGDAWMN 523


>ref|XP_003551192.1| PREDICTED: uncharacterized protein LOC100784329 [Glycine max]
          Length = 428

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/93 (47%), Positives = 66/93 (70%)
 Frame = +2

Query: 2   DFCATSLMMLDNELENFIFDVRSSKDFLELEGISDLAKKMVDTKRNIVYPLVYSXXXXXX 181
           +F A +L+ML+N+LE +I D+R++ +F  L+GI ++ +K+V+T+R+IVYPLVY       
Sbjct: 302 EFSAINLVMLNNQLETYIIDMRNNIEFSSLKGIKNIYEKLVETRRHIVYPLVYLLLKLAM 361

Query: 182 XXXXXXXXVERAFSAMHIIKARLRNRIGDMWLN 280
                   +ERAFSAM I+K RLRNR+GD W+N
Sbjct: 362 ILPVATTTMERAFSAMKIVKNRLRNRMGDAWMN 394


>ref|XP_002332238.1| predicted protein [Populus trichocarpa] gi|222831851|gb|EEE70328.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/86 (47%), Positives = 59/86 (68%)
 Frame = +2

Query: 23  MMLDNELENFIFDVRSSKDFLELEGISDLAKKMVDTKRNIVYPLVYSXXXXXXXXXXXXX 202
           M+L ++L+ +I D+R   +F  +EGI+ LA+KMV TK+N+++PLVY              
Sbjct: 1   MVLGDQLDTYIIDLRGDDEFSSIEGIASLAEKMVKTKKNLIFPLVYMLIKLSLLLPVATA 60

Query: 203 XVERAFSAMHIIKARLRNRIGDMWLN 280
            VER FSAMHI+K+RLRNR+GD W+N
Sbjct: 61  TVERVFSAMHIVKSRLRNRMGDKWMN 86


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