BLASTX nr result
ID: Coptis24_contig00020749
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020749 (414 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI40500.3| unnamed protein product [Vitis vinifera] 141 5e-32 ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containi... 141 5e-32 emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera] 141 5e-32 ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containi... 128 5e-28 ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containi... 127 1e-27 >emb|CBI40500.3| unnamed protein product [Vitis vinifera] Length = 1133 Score = 141 bits (356), Expect = 5e-32 Identities = 67/137 (48%), Positives = 93/137 (67%) Frame = +3 Query: 3 DVRSASIVFLVGFSRNRLSLSFLIEEFDKAGVSLYEFLEIFGELCHKQVSFNSKVFILVL 182 D SA++VF VG RN L + +EEF + SL+ LE+F EL K V F+S+V+ + L Sbjct: 471 DFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVAL 530 Query: 183 KICTELVDFWLGVEIHACIVKKGLDMDVHLMCSLMNFYAHTWGEECVEGVFNEMPSQSNL 362 K CT ++D WLG+EIH C++K+G D+DV+L C+LMNFY WG E VF+EMP+ L Sbjct: 531 KTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEAL 590 Query: 363 LWNEAVMMKLRSGDLMK 413 LWNEA+++ L+S L K Sbjct: 591 LWNEAIILNLQSEKLQK 607 >ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like [Vitis vinifera] Length = 913 Score = 141 bits (356), Expect = 5e-32 Identities = 67/137 (48%), Positives = 93/137 (67%) Frame = +3 Query: 3 DVRSASIVFLVGFSRNRLSLSFLIEEFDKAGVSLYEFLEIFGELCHKQVSFNSKVFILVL 182 D SA++VF VG RN L + +EEF + SL+ LE+F EL K V F+S+V+ + L Sbjct: 81 DFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVAL 140 Query: 183 KICTELVDFWLGVEIHACIVKKGLDMDVHLMCSLMNFYAHTWGEECVEGVFNEMPSQSNL 362 K CT ++D WLG+EIH C++K+G D+DV+L C+LMNFY WG E VF+EMP+ L Sbjct: 141 KTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEAL 200 Query: 363 LWNEAVMMKLRSGDLMK 413 LWNEA+++ L+S L K Sbjct: 201 LWNEAIILNLQSEKLQK 217 >emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera] Length = 1408 Score = 141 bits (356), Expect = 5e-32 Identities = 67/137 (48%), Positives = 93/137 (67%) Frame = +3 Query: 3 DVRSASIVFLVGFSRNRLSLSFLIEEFDKAGVSLYEFLEIFGELCHKQVSFNSKVFILVL 182 D SA++VF VG RN L + +EEF + SL+ LE+F EL K V F+S+V+ + L Sbjct: 622 DFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVAL 681 Query: 183 KICTELVDFWLGVEIHACIVKKGLDMDVHLMCSLMNFYAHTWGEECVEGVFNEMPSQSNL 362 K CT ++D WLG+EIH C++K+G D+DV+L C+LMNFY WG E VF+EMP+ L Sbjct: 682 KTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEAL 741 Query: 363 LWNEAVMMKLRSGDLMK 413 LWNEA+++ L+S L K Sbjct: 742 LWNEAIILNLQSEKLQK 758 >ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like [Glycine max] Length = 911 Score = 128 bits (321), Expect = 5e-28 Identities = 63/132 (47%), Positives = 84/132 (63%) Frame = +3 Query: 3 DVRSASIVFLVGFSRNRLSLSFLIEEFDKAGVSLYEFLEIFGELCHKQVSFNSKVFILVL 182 D SA+ VF VGF+RN L + +EEF G +E LE+F EL K V F+SK +VL Sbjct: 79 DFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVL 138 Query: 183 KICTELVDFWLGVEIHACIVKKGLDMDVHLMCSLMNFYAHTWGEECVEGVFNEMPSQSNL 362 KIC L++ WLG+E+HAC++K+G +DVHL C+L+N Y G + VF+E P Q + Sbjct: 139 KICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDF 198 Query: 363 LWNEAVMMKLRS 398 LWN VM LRS Sbjct: 199 LWNTIVMANLRS 210 >ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like [Glycine max] Length = 911 Score = 127 bits (318), Expect = 1e-27 Identities = 64/132 (48%), Positives = 83/132 (62%) Frame = +3 Query: 3 DVRSASIVFLVGFSRNRLSLSFLIEEFDKAGVSLYEFLEIFGELCHKQVSFNSKVFILVL 182 D SA+ VF VGF+RN L + IEEF G +E L +F EL K V F+SK +VL Sbjct: 79 DFESATKVFFVGFARNYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVL 138 Query: 183 KICTELVDFWLGVEIHACIVKKGLDMDVHLMCSLMNFYAHTWGEECVEGVFNEMPSQSNL 362 KIC L++ WLG+E+HAC+VK+G +DVHL C+L+N Y G + VF+E P Q + Sbjct: 139 KICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDF 198 Query: 363 LWNEAVMMKLRS 398 LWN VM LRS Sbjct: 199 LWNTIVMANLRS 210