BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020749
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40500.3| unnamed protein product [Vitis vinifera]              141   5e-32
ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]   141   5e-32
ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containi...   128   5e-28
ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27

>emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/137 (48%), Positives = 93/137 (67%)
 Frame = +3

Query: 3   DVRSASIVFLVGFSRNRLSLSFLIEEFDKAGVSLYEFLEIFGELCHKQVSFNSKVFILVL 182
           D  SA++VF VG  RN L  +  +EEF  +  SL+  LE+F EL  K V F+S+V+ + L
Sbjct: 471 DFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVAL 530

Query: 183 KICTELVDFWLGVEIHACIVKKGLDMDVHLMCSLMNFYAHTWGEECVEGVFNEMPSQSNL 362
           K CT ++D WLG+EIH C++K+G D+DV+L C+LMNFY   WG E    VF+EMP+   L
Sbjct: 531 KTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEAL 590

Query: 363 LWNEAVMMKLRSGDLMK 413
           LWNEA+++ L+S  L K
Sbjct: 591 LWNEAIILNLQSEKLQK 607


>ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/137 (48%), Positives = 93/137 (67%)
 Frame = +3

Query: 3   DVRSASIVFLVGFSRNRLSLSFLIEEFDKAGVSLYEFLEIFGELCHKQVSFNSKVFILVL 182
           D  SA++VF VG  RN L  +  +EEF  +  SL+  LE+F EL  K V F+S+V+ + L
Sbjct: 81  DFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVAL 140

Query: 183 KICTELVDFWLGVEIHACIVKKGLDMDVHLMCSLMNFYAHTWGEECVEGVFNEMPSQSNL 362
           K CT ++D WLG+EIH C++K+G D+DV+L C+LMNFY   WG E    VF+EMP+   L
Sbjct: 141 KTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEAL 200

Query: 363 LWNEAVMMKLRSGDLMK 413
           LWNEA+++ L+S  L K
Sbjct: 201 LWNEAIILNLQSEKLQK 217


>emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/137 (48%), Positives = 93/137 (67%)
 Frame = +3

Query: 3    DVRSASIVFLVGFSRNRLSLSFLIEEFDKAGVSLYEFLEIFGELCHKQVSFNSKVFILVL 182
            D  SA++VF VG  RN L  +  +EEF  +  SL+  LE+F EL  K V F+S+V+ + L
Sbjct: 622  DFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVAL 681

Query: 183  KICTELVDFWLGVEIHACIVKKGLDMDVHLMCSLMNFYAHTWGEECVEGVFNEMPSQSNL 362
            K CT ++D WLG+EIH C++K+G D+DV+L C+LMNFY   WG E    VF+EMP+   L
Sbjct: 682  KTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEAL 741

Query: 363  LWNEAVMMKLRSGDLMK 413
            LWNEA+++ L+S  L K
Sbjct: 742  LWNEAIILNLQSEKLQK 758


>ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  128 bits (321), Expect = 5e-28
 Identities = 63/132 (47%), Positives = 84/132 (63%)
 Frame = +3

Query: 3   DVRSASIVFLVGFSRNRLSLSFLIEEFDKAGVSLYEFLEIFGELCHKQVSFNSKVFILVL 182
           D  SA+ VF VGF+RN L  +  +EEF   G   +E LE+F EL  K V F+SK   +VL
Sbjct: 79  DFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVL 138

Query: 183 KICTELVDFWLGVEIHACIVKKGLDMDVHLMCSLMNFYAHTWGEECVEGVFNEMPSQSNL 362
           KIC  L++ WLG+E+HAC++K+G  +DVHL C+L+N Y    G +    VF+E P Q + 
Sbjct: 139 KICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDF 198

Query: 363 LWNEAVMMKLRS 398
           LWN  VM  LRS
Sbjct: 199 LWNTIVMANLRS 210


>ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/132 (48%), Positives = 83/132 (62%)
 Frame = +3

Query: 3   DVRSASIVFLVGFSRNRLSLSFLIEEFDKAGVSLYEFLEIFGELCHKQVSFNSKVFILVL 182
           D  SA+ VF VGF+RN L  +  IEEF   G   +E L +F EL  K V F+SK   +VL
Sbjct: 79  DFESATKVFFVGFARNYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVL 138

Query: 183 KICTELVDFWLGVEIHACIVKKGLDMDVHLMCSLMNFYAHTWGEECVEGVFNEMPSQSNL 362
           KIC  L++ WLG+E+HAC+VK+G  +DVHL C+L+N Y    G +    VF+E P Q + 
Sbjct: 139 KICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDF 198

Query: 363 LWNEAVMMKLRS 398
           LWN  VM  LRS
Sbjct: 199 LWNTIVMANLRS 210