BLASTX nr result
ID: Coptis24_contig00020733
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00020733
(394 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2... 44 4e-08
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 43 7e-08
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2... 44 9e-08
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2... 42 3e-07
ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|2... 40 1e-06
>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
predicted protein [Populus trichocarpa]
Length = 809
Score = 44.3 bits (103), Expect(2) = 4e-08
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 385 PKFTNGIAEVPP--ETIEEGVSIWKEYMVGYFVEKRLSYPFVKEAVSKQWKLKGSFDML- 215
P T+G +V P + E+G WK +VG+FV ++L YP V + W G ++L
Sbjct: 130 PTMTDGRVKVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 189
Query: 214 ADRELF*FTSSS 179
+D F F S
Sbjct: 190 SDNGFFIFNFDS 201
Score = 37.7 bits (86), Expect(2) = 4e-08
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -3
Query: 188 FKFINDEDRQFVIEHGPLFLAGRIFVVRLWSESIELHRKTINSVPIWVKV-DFPKQLWTD 12
F F + + V+E P +A R V++ W +++ + VP+WV++ + P + WT
Sbjct: 197 FNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDFARVPVWVRLYNVPLEYWTI 256
Query: 11 NGI 3
G+
Sbjct: 257 KGL 259
>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
predicted protein [Populus trichocarpa]
Length = 1386
Score = 42.7 bits (99), Expect(2) = 7e-08
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = -1
Query: 385 PKFTNGIAEVPP--ETIEEGVSIWKEYMVGYFVEKRLSYPFVKEAVSKQWKLKGSFDML- 215
P T+G V P + E+G WK +VG+FV ++L YP V + W G ++L
Sbjct: 130 PTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 189
Query: 214 ADRELF*FTSSS 179
+D F F S
Sbjct: 190 SDNGFFIFNFDS 201
Score = 38.5 bits (88), Expect(2) = 7e-08
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -3
Query: 188 FKFINDEDRQFVIEHGPLFLAGRIFVVRLWSESIELHRKTINSVPIWVKV-DFPKQLWTD 12
F F + + V+E P +A R V++ W +++ + + VP+WV++ + P + WT
Sbjct: 197 FNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTI 256
Query: 11 NGI 3
G+
Sbjct: 257 KGL 259
>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
predicted protein [Populus trichocarpa]
Length = 1046
Score = 43.5 bits (101), Expect(2) = 9e-08
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = -1
Query: 385 PKFTNGIAEVPP--ETIEEGVSIWKEYMVGYFVEKRLSYPFVKEAVSKQWKLKGSFDML- 215
P T+G V P + E+G WK +VG+FV ++L YP V + W G ++L
Sbjct: 130 PTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 189
Query: 214 ADRELF*FTSSS 179
+D F F S
Sbjct: 190 SDNGFFIFNFDS 201
Score = 37.4 bits (85), Expect(2) = 9e-08
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -3
Query: 188 FKFINDEDRQFVIEHGPLFLAGRIFVVRLWSESIELHRKTINSVPIWVKV-DFPKQLWTD 12
F F + + V+E P +A R V++ W +++ + + +VP+WV + + P + WT
Sbjct: 197 FNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLATVPVWVWLYNVPLEYWTI 256
Query: 11 NGI 3
G+
Sbjct: 257 EGL 259
>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
predicted protein [Populus trichocarpa]
Length = 1166
Score = 42.0 bits (97), Expect(2) = 3e-07
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -1
Query: 385 PKFTNGIAEVPP--ETIEEGVSIWKEYMVGYFVEKRLSYPFVKEAVSKQWKLKGSFDMLA 212
P T+G V P + E+G WK +VG+FV ++L YP V + W G ++L+
Sbjct: 130 PTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 189
Score = 42.0 bits (97), Expect(2) = 3e-07
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -1
Query: 385 PKFTNGIAEVPP--ETIEEGVSIWKEYMVGYFVEKRLSYPFVKEAVSKQWKLKGSFDMLA 212
P T+G V P + E+G WK +VG+FV ++L YP V + W G ++L+
Sbjct: 923 PTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 982
Score = 37.4 bits (85), Expect(2) = 3e-07
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -3
Query: 155 VIEHGPLFLAGRIFVVRLWSESIELHRKTINSVPIWVKV-DFPKQLWTDNGI 3
V+E P +A R V++ W +++ + + VP+WV++ + P + WT G+
Sbjct: 208 VLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGL 259
Score = 37.4 bits (85), Expect(2) = 3e-07
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -3
Query: 155 VIEHGPLFLAGRIFVVRLWSESIELHRKTINSVPIWVKV-DFPKQLWTDNGI 3
V+E P +A R V++ W +++ + + VP+WV++ + P + WT G+
Sbjct: 1001 VLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGL 1052
>ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|222874137|gb|EEF11268.1|
predicted protein [Populus trichocarpa]
Length = 557
Score = 40.0 bits (92), Expect(2) = 1e-06
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 355 PPETIEEGVSIWKEYMVGYFVEKRLSYPFVKEAVSKQWKLKGSFDMLA 212
P + E+G WK +VG+FV ++L YP V + W G ++L+
Sbjct: 116 PLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 163
Score = 37.4 bits (85), Expect(2) = 1e-06
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -3
Query: 155 VIEHGPLFLAGRIFVVRLWSESIELHRKTINSVPIWVKV-DFPKQLWTDNGI 3
V+E P +A R V++ W +++ + + VP+WV++ + P + WT G+
Sbjct: 182 VLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGL 233