BLASTX nr result

ID: Coptis24_contig00020733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020733
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    44   4e-08
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    43   7e-08
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    44   9e-08
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    42   3e-07
ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|2...    40   1e-06

>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 44.3 bits (103), Expect(2) = 4e-08
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = -1

Query: 385 PKFTNGIAEVPP--ETIEEGVSIWKEYMVGYFVEKRLSYPFVKEAVSKQWKLKGSFDML- 215
           P  T+G  +V P  +  E+G   WK  +VG+FV ++L YP V     + W   G  ++L 
Sbjct: 130 PTMTDGRVKVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 189

Query: 214 ADRELF*FTSSS 179
           +D   F F   S
Sbjct: 190 SDNGFFIFNFDS 201



 Score = 37.7 bits (86), Expect(2) = 4e-08
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = -3

Query: 188 FKFINDEDRQFVIEHGPLFLAGRIFVVRLWSESIELHRKTINSVPIWVKV-DFPKQLWTD 12
           F F + +    V+E  P  +A R  V++ W  +++  +     VP+WV++ + P + WT 
Sbjct: 197 FNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDFARVPVWVRLYNVPLEYWTI 256

Query: 11  NGI 3
            G+
Sbjct: 257 KGL 259


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 42.7 bits (99), Expect(2) = 7e-08
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
 Frame = -1

Query: 385 PKFTNGIAEVPP--ETIEEGVSIWKEYMVGYFVEKRLSYPFVKEAVSKQWKLKGSFDML- 215
           P  T+G   V P  +  E+G   WK  +VG+FV ++L YP V     + W   G  ++L 
Sbjct: 130 PTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 189

Query: 214 ADRELF*FTSSS 179
           +D   F F   S
Sbjct: 190 SDNGFFIFNFDS 201



 Score = 38.5 bits (88), Expect(2) = 7e-08
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = -3

Query: 188 FKFINDEDRQFVIEHGPLFLAGRIFVVRLWSESIELHRKTINSVPIWVKV-DFPKQLWTD 12
           F F + +    V+E  P  +A R  V++ W  +++  +  +  VP+WV++ + P + WT 
Sbjct: 197 FNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTI 256

Query: 11  NGI 3
            G+
Sbjct: 257 KGL 259


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 43.5 bits (101), Expect(2) = 9e-08
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
 Frame = -1

Query: 385 PKFTNGIAEVPP--ETIEEGVSIWKEYMVGYFVEKRLSYPFVKEAVSKQWKLKGSFDML- 215
           P  T+G   V P  +  E+G   WK  +VG+FV ++L YP V     + W   G  ++L 
Sbjct: 130 PTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 189

Query: 214 ADRELF*FTSSS 179
           +D   F F   S
Sbjct: 190 SDNGFFIFNFDS 201



 Score = 37.4 bits (85), Expect(2) = 9e-08
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = -3

Query: 188 FKFINDEDRQFVIEHGPLFLAGRIFVVRLWSESIELHRKTINSVPIWVKV-DFPKQLWTD 12
           F F + +    V+E  P  +A R  V++ W  +++  +  + +VP+WV + + P + WT 
Sbjct: 197 FNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLATVPVWVWLYNVPLEYWTI 256

Query: 11  NGI 3
            G+
Sbjct: 257 EGL 259


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 42.0 bits (97), Expect(2) = 3e-07
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -1

Query: 385 PKFTNGIAEVPP--ETIEEGVSIWKEYMVGYFVEKRLSYPFVKEAVSKQWKLKGSFDMLA 212
           P  T+G   V P  +  E+G   WK  +VG+FV ++L YP V     + W   G  ++L+
Sbjct: 130 PTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 189



 Score = 42.0 bits (97), Expect(2) = 3e-07
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -1

Query: 385  PKFTNGIAEVPP--ETIEEGVSIWKEYMVGYFVEKRLSYPFVKEAVSKQWKLKGSFDMLA 212
            P  T+G   V P  +  E+G   WK  +VG+FV ++L YP V     + W   G  ++L+
Sbjct: 923  PTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 982



 Score = 37.4 bits (85), Expect(2) = 3e-07
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = -3

Query: 155 VIEHGPLFLAGRIFVVRLWSESIELHRKTINSVPIWVKV-DFPKQLWTDNGI 3
           V+E  P  +A R  V++ W  +++  +  +  VP+WV++ + P + WT  G+
Sbjct: 208 VLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGL 259



 Score = 37.4 bits (85), Expect(2) = 3e-07
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = -3

Query: 155  VIEHGPLFLAGRIFVVRLWSESIELHRKTINSVPIWVKV-DFPKQLWTDNGI 3
            V+E  P  +A R  V++ W  +++  +  +  VP+WV++ + P + WT  G+
Sbjct: 1001 VLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGL 1052


>ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|222874137|gb|EEF11268.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score = 40.0 bits (92), Expect(2) = 1e-06
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -1

Query: 355 PPETIEEGVSIWKEYMVGYFVEKRLSYPFVKEAVSKQWKLKGSFDMLA 212
           P +  E+G   WK  +VG+FV ++L YP V     + W   G  ++L+
Sbjct: 116 PLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLS 163



 Score = 37.4 bits (85), Expect(2) = 1e-06
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = -3

Query: 155 VIEHGPLFLAGRIFVVRLWSESIELHRKTINSVPIWVKV-DFPKQLWTDNGI 3
           V+E  P  +A R  V++ W  +++  +  +  VP+WV++ + P + WT  G+
Sbjct: 182 VLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGL 233


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