BLASTX nr result
ID: Coptis24_contig00020724
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020724 (340 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEI83422.1| chlorophyll synthase [Camellia sinensis] 112 4e-23 ref|XP_002263271.1| PREDICTED: chlorophyll synthase, chloroplast... 107 8e-22 gb|ACQ44245.1| chlorophyll synthase [Nicotiana tabacum] 101 5e-20 gb|ACQ44244.1| chlorophyll synthase [Nicotiana tabacum] 100 2e-19 gb|AFK36559.1| unknown [Lotus japonicus] 100 2e-19 >gb|AEI83422.1| chlorophyll synthase [Camellia sinensis] Length = 374 Score = 112 bits (279), Expect = 4e-23 Identities = 64/118 (54%), Positives = 74/118 (62%), Gaps = 5/118 (4%) Frame = -2 Query: 339 AALLNNGGSSSVRLLSNKNTNPRIRSSPSSLHRPNSLSLTSRKLVVKAXXXXXXXXXXXT 160 A+LLN SS+RL + K R R+ P P SLSLT R+L V+A Sbjct: 2 ASLLNT--VSSIRLSNAKTNRLRTRTVPP----PISLSLTRRRLTVRATETDANEAIKAE 55 Query: 159 LPSKV-----SSFKQLLGIRGAAQETEKWKIHLQLAKPITWPPLIWGVVCGAAASGNF 1 P K SSF QLLGI+GA QET+KWKI LQL KP+TWPPL+WGVVCGAAASGNF Sbjct: 56 APDKAPVASGSSFNQLLGIKGAKQETDKWKIRLQLTKPVTWPPLVWGVVCGAAASGNF 113 >ref|XP_002263271.1| PREDICTED: chlorophyll synthase, chloroplastic [Vitis vinifera] gi|296083177|emb|CBI22813.3| unnamed protein product [Vitis vinifera] Length = 370 Score = 107 bits (268), Expect = 8e-22 Identities = 65/118 (55%), Positives = 73/118 (61%), Gaps = 5/118 (4%) Frame = -2 Query: 339 AALLNNGGSSSVRLLSNKNTNPRIRSSPSSLHRPNSLSLTSRKLVVKAXXXXXXXXXXXT 160 A+LLN SSVRL SN T PR P SLSL R+LVV+A Sbjct: 2 ASLLNT--VSSVRL-SNARTTPRFLP-------PISLSLHRRRLVVRAAETDANEAVKSQ 51 Query: 159 LPSKV-----SSFKQLLGIRGAAQETEKWKIHLQLAKPITWPPLIWGVVCGAAASGNF 1 P K S+F QLLGI+GAA+ET KWKI LQL KP+TWPPL+WGVVCGAAASGNF Sbjct: 52 APDKAPAGSGSNFNQLLGIKGAAKETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNF 109 >gb|ACQ44245.1| chlorophyll synthase [Nicotiana tabacum] Length = 373 Score = 101 bits (252), Expect = 5e-20 Identities = 61/118 (51%), Positives = 76/118 (64%), Gaps = 5/118 (4%) Frame = -2 Query: 339 AALLNNGGSSSVRLLSNKNTNPRIRSSPSSLHRPNSLSLTSRKLVVKAXXXXXXXXXXXT 160 A+LLN+ S++L + N NP +RSS S P LSL+ R+LVV+A Sbjct: 2 ASLLNS--VPSIKLSNFSNNNP-LRSSQIS--SPFCLSLSRRRLVVRATETDKEVKAQA- 55 Query: 159 LPSKV-----SSFKQLLGIRGAAQETEKWKIHLQLAKPITWPPLIWGVVCGAAASGNF 1 P K SS Q+LGI+GA QET+KWKI +QL KP+TWPPL+WGVVCGAAASGNF Sbjct: 56 -PDKAPAAGGSSINQILGIKGAKQETDKWKIRVQLTKPVTWPPLVWGVVCGAAASGNF 112 >gb|ACQ44244.1| chlorophyll synthase [Nicotiana tabacum] Length = 373 Score = 100 bits (248), Expect = 2e-19 Identities = 60/118 (50%), Positives = 75/118 (63%), Gaps = 5/118 (4%) Frame = -2 Query: 339 AALLNNGGSSSVRLLSNKNTNPRIRSSPSSLHRPNSLSLTSRKLVVKAXXXXXXXXXXXT 160 A+LLN+ S++L + N NP +RSS S P LS + R+LVV+A Sbjct: 2 ASLLNS--VPSIKLSNFSNNNP-LRSSQIS--SPFCLSFSRRRLVVRATETDKEVKAQA- 55 Query: 159 LPSKV-----SSFKQLLGIRGAAQETEKWKIHLQLAKPITWPPLIWGVVCGAAASGNF 1 P K SS Q+LGI+GA QET+KWKI +QL KP+TWPPL+WGVVCGAAASGNF Sbjct: 56 -PDKAPAAGGSSINQILGIKGAKQETDKWKIRVQLTKPVTWPPLVWGVVCGAAASGNF 112 >gb|AFK36559.1| unknown [Lotus japonicus] Length = 219 Score = 99.8 bits (247), Expect = 2e-19 Identities = 61/118 (51%), Positives = 72/118 (61%), Gaps = 6/118 (5%) Frame = -2 Query: 336 ALLNNGGSSSVRLLSNKNTN-PRIRSSPSSLHRPNSLSLTSRKLVVKAXXXXXXXXXXXT 160 A L N S S R+LS T P ++S P + P S S T R+L V+A Sbjct: 2 ASLVNMVSVSPRILSPTTTRAPSVQSRP--VLSPFSDSFTRRRLTVRAAETDANEVKSQA 59 Query: 159 LPSKV-----SSFKQLLGIRGAAQETEKWKIHLQLAKPITWPPLIWGVVCGAAASGNF 1 P K S+F QLLGI+GA+QET KWKI LQL KP+TWPPL+WGVVCGAAASGNF Sbjct: 60 -PDKAPAKNGSAFNQLLGIKGASQETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNF 116