BLASTX nr result

ID: Coptis24_contig00020724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020724
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI83422.1| chlorophyll synthase [Camellia sinensis]               112   4e-23
ref|XP_002263271.1| PREDICTED: chlorophyll synthase, chloroplast...   107   8e-22
gb|ACQ44245.1| chlorophyll synthase [Nicotiana tabacum]               101   5e-20
gb|ACQ44244.1| chlorophyll synthase [Nicotiana tabacum]               100   2e-19
gb|AFK36559.1| unknown [Lotus japonicus]                              100   2e-19

>gb|AEI83422.1| chlorophyll synthase [Camellia sinensis]
          Length = 374

 Score =  112 bits (279), Expect = 4e-23
 Identities = 64/118 (54%), Positives = 74/118 (62%), Gaps = 5/118 (4%)
 Frame = -2

Query: 339 AALLNNGGSSSVRLLSNKNTNPRIRSSPSSLHRPNSLSLTSRKLVVKAXXXXXXXXXXXT 160
           A+LLN    SS+RL + K    R R+ P     P SLSLT R+L V+A            
Sbjct: 2   ASLLNT--VSSIRLSNAKTNRLRTRTVPP----PISLSLTRRRLTVRATETDANEAIKAE 55

Query: 159 LPSKV-----SSFKQLLGIRGAAQETEKWKIHLQLAKPITWPPLIWGVVCGAAASGNF 1
            P K      SSF QLLGI+GA QET+KWKI LQL KP+TWPPL+WGVVCGAAASGNF
Sbjct: 56  APDKAPVASGSSFNQLLGIKGAKQETDKWKIRLQLTKPVTWPPLVWGVVCGAAASGNF 113


>ref|XP_002263271.1| PREDICTED: chlorophyll synthase, chloroplastic [Vitis vinifera]
           gi|296083177|emb|CBI22813.3| unnamed protein product
           [Vitis vinifera]
          Length = 370

 Score =  107 bits (268), Expect = 8e-22
 Identities = 65/118 (55%), Positives = 73/118 (61%), Gaps = 5/118 (4%)
 Frame = -2

Query: 339 AALLNNGGSSSVRLLSNKNTNPRIRSSPSSLHRPNSLSLTSRKLVVKAXXXXXXXXXXXT 160
           A+LLN    SSVRL SN  T PR          P SLSL  R+LVV+A            
Sbjct: 2   ASLLNT--VSSVRL-SNARTTPRFLP-------PISLSLHRRRLVVRAAETDANEAVKSQ 51

Query: 159 LPSKV-----SSFKQLLGIRGAAQETEKWKIHLQLAKPITWPPLIWGVVCGAAASGNF 1
            P K      S+F QLLGI+GAA+ET KWKI LQL KP+TWPPL+WGVVCGAAASGNF
Sbjct: 52  APDKAPAGSGSNFNQLLGIKGAAKETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNF 109


>gb|ACQ44245.1| chlorophyll synthase [Nicotiana tabacum]
          Length = 373

 Score =  101 bits (252), Expect = 5e-20
 Identities = 61/118 (51%), Positives = 76/118 (64%), Gaps = 5/118 (4%)
 Frame = -2

Query: 339 AALLNNGGSSSVRLLSNKNTNPRIRSSPSSLHRPNSLSLTSRKLVVKAXXXXXXXXXXXT 160
           A+LLN+    S++L +  N NP +RSS  S   P  LSL+ R+LVV+A            
Sbjct: 2   ASLLNS--VPSIKLSNFSNNNP-LRSSQIS--SPFCLSLSRRRLVVRATETDKEVKAQA- 55

Query: 159 LPSKV-----SSFKQLLGIRGAAQETEKWKIHLQLAKPITWPPLIWGVVCGAAASGNF 1
            P K      SS  Q+LGI+GA QET+KWKI +QL KP+TWPPL+WGVVCGAAASGNF
Sbjct: 56  -PDKAPAAGGSSINQILGIKGAKQETDKWKIRVQLTKPVTWPPLVWGVVCGAAASGNF 112


>gb|ACQ44244.1| chlorophyll synthase [Nicotiana tabacum]
          Length = 373

 Score =  100 bits (248), Expect = 2e-19
 Identities = 60/118 (50%), Positives = 75/118 (63%), Gaps = 5/118 (4%)
 Frame = -2

Query: 339 AALLNNGGSSSVRLLSNKNTNPRIRSSPSSLHRPNSLSLTSRKLVVKAXXXXXXXXXXXT 160
           A+LLN+    S++L +  N NP +RSS  S   P  LS + R+LVV+A            
Sbjct: 2   ASLLNS--VPSIKLSNFSNNNP-LRSSQIS--SPFCLSFSRRRLVVRATETDKEVKAQA- 55

Query: 159 LPSKV-----SSFKQLLGIRGAAQETEKWKIHLQLAKPITWPPLIWGVVCGAAASGNF 1
            P K      SS  Q+LGI+GA QET+KWKI +QL KP+TWPPL+WGVVCGAAASGNF
Sbjct: 56  -PDKAPAAGGSSINQILGIKGAKQETDKWKIRVQLTKPVTWPPLVWGVVCGAAASGNF 112


>gb|AFK36559.1| unknown [Lotus japonicus]
          Length = 219

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 61/118 (51%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
 Frame = -2

Query: 336 ALLNNGGSSSVRLLSNKNTN-PRIRSSPSSLHRPNSLSLTSRKLVVKAXXXXXXXXXXXT 160
           A L N  S S R+LS   T  P ++S P  +  P S S T R+L V+A            
Sbjct: 2   ASLVNMVSVSPRILSPTTTRAPSVQSRP--VLSPFSDSFTRRRLTVRAAETDANEVKSQA 59

Query: 159 LPSKV-----SSFKQLLGIRGAAQETEKWKIHLQLAKPITWPPLIWGVVCGAAASGNF 1
            P K      S+F QLLGI+GA+QET KWKI LQL KP+TWPPL+WGVVCGAAASGNF
Sbjct: 60  -PDKAPAKNGSAFNQLLGIKGASQETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNF 116


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