BLASTX nr result

ID: Coptis24_contig00020719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020719
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272187.1| PREDICTED: protein Dr1 homolog [Vitis vinife...   202   6e-50
gb|AEO36010.1| hypothetical protein [Amblyomma maculatum]             199   7e-49
gb|ABR16864.1| unknown [Picea sitchensis]                             197   2e-48
ref|XP_002511998.1| TATA-binding protein-associated phosphoprote...   195   1e-47
ref|NP_001141894.1| uncharacterized protein LOC100274041 [Zea ma...   193   4e-47

>ref|XP_002272187.1| PREDICTED: protein Dr1 homolog [Vitis vinifera]
           gi|297734148|emb|CBI15395.3| unnamed protein product
           [Vitis vinifera]
          Length = 155

 Score =  202 bits (515), Expect = 6e-50
 Identities = 107/156 (68%), Positives = 117/156 (75%)
 Frame = +1

Query: 112 MEPMDIVGKSKEDVTLPKATMFKIIKEMMPQENVRVARDAQDLLVECCVEFINLLSSESN 291
           MEPMDIVGKSKED +LPKATM KIIKEM+P + VRVARDAQDLL+ECCVEFINL+SSESN
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPD-VRVARDAQDLLIECCVEFINLISSESN 59

Query: 292 EVCSREEKRTIAPEHVIKALEVLGFGDYIEEVYAAYEQHKAETLDSPKGGKLIGXXXXXX 471
           +VCSREEKRTIAPEHV+KALEVLGFG+YIEEVYAAYEQHK ET+D+ KGGK         
Sbjct: 60  DVCSREEKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMDTIKGGKWSNGAEMTE 119

Query: 472 XXXXXXXXXXXXXXXXXXNGGVKITNPSELDRSLES 579
                             NGG  I   SELD SLES
Sbjct: 120 EEALAEQQRMFAEARARMNGGASIQKQSELDPSLES 155


>gb|AEO36010.1| hypothetical protein [Amblyomma maculatum]
          Length = 155

 Score =  199 bits (506), Expect = 7e-49
 Identities = 106/156 (67%), Positives = 115/156 (73%)
 Frame = +1

Query: 112 MEPMDIVGKSKEDVTLPKATMFKIIKEMMPQENVRVARDAQDLLVECCVEFINLLSSESN 291
           MEPMDIVGKSKEDV+LPKATM KIIKEM+P + VRVARD QDLLVECCVEFINL+SSESN
Sbjct: 1   MEPMDIVGKSKEDVSLPKATMCKIIKEMLPPD-VRVARDTQDLLVECCVEFINLISSESN 59

Query: 292 EVCSREEKRTIAPEHVIKALEVLGFGDYIEEVYAAYEQHKAETLDSPKGGKLIGXXXXXX 471
           EVCSRE+KRTIAPEHV+KALEVLGFG+YIE+VYAAYEQHK ETL SPKGGK  G      
Sbjct: 60  EVCSREDKRTIAPEHVLKALEVLGFGEYIEDVYAAYEQHKLETLGSPKGGKFNGAEMTEE 119

Query: 472 XXXXXXXXXXXXXXXXXXNGGVKITNPSELDRSLES 579
                             NG       S+ D SLES
Sbjct: 120 EALAEQQRMFAEARARMNNGASSTQKQSDSDPSLES 155


>gb|ABR16864.1| unknown [Picea sitchensis]
          Length = 151

 Score =  197 bits (502), Expect = 2e-48
 Identities = 97/111 (87%), Positives = 106/111 (95%)
 Frame = +1

Query: 112 MEPMDIVGKSKEDVTLPKATMFKIIKEMMPQENVRVARDAQDLLVECCVEFINLLSSESN 291
           MEPMDIVGKSK+DV+LPKATMFKIIKEM+P + VRVARDAQDLLVECCVEFINL+SSESN
Sbjct: 1   MEPMDIVGKSKDDVSLPKATMFKIIKEMLPPD-VRVARDAQDLLVECCVEFINLISSESN 59

Query: 292 EVCSREEKRTIAPEHVIKALEVLGFGDYIEEVYAAYEQHKAETLDSPKGGK 444
           EVC REEKRTIAPEHV++ALEVLGFGDYIEEVYAAYEQH+ ETLDSPK G+
Sbjct: 60  EVCGREEKRTIAPEHVLRALEVLGFGDYIEEVYAAYEQHRLETLDSPKSGR 110


>ref|XP_002511998.1| TATA-binding protein-associated phosphoprotein, putative [Ricinus
           communis] gi|223549178|gb|EEF50667.1| TATA-binding
           protein-associated phosphoprotein, putative [Ricinus
           communis]
          Length = 155

 Score =  195 bits (496), Expect = 1e-47
 Identities = 105/156 (67%), Positives = 113/156 (72%)
 Frame = +1

Query: 112 MEPMDIVGKSKEDVTLPKATMFKIIKEMMPQENVRVARDAQDLLVECCVEFINLLSSESN 291
           MEP DIVGKSKED +LPKATM KIIKEM+P + VRVARDAQDLL+ECCVEFINL+SSESN
Sbjct: 1   MEPTDIVGKSKEDASLPKATMTKIIKEMLPPD-VRVARDAQDLLIECCVEFINLVSSESN 59

Query: 292 EVCSREEKRTIAPEHVIKALEVLGFGDYIEEVYAAYEQHKAETLDSPKGGKLIGXXXXXX 471
           EVCSREEKRTIAPEHV+KALEVLGFG+YIEEVYAAYEQHK ET+DS KGGK         
Sbjct: 60  EVCSREEKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMDSLKGGKWSNGAEMTE 119

Query: 472 XXXXXXXXXXXXXXXXXXNGGVKITNPSELDRSLES 579
                             NGG       E D SLES
Sbjct: 120 EEAAAEQQRMFAEARARMNGGAIAPKQPETDGSLES 155


>ref|NP_001141894.1| uncharacterized protein LOC100274041 [Zea mays]
           gi|194693734|gb|ACF80951.1| unknown [Zea mays]
           gi|323388725|gb|ADX60167.1| CCAAT1-Dr1 transcription
           factor [Zea mays] gi|414870592|tpg|DAA49149.1| TPA:
           Repressor protein [Zea mays]
          Length = 301

 Score =  193 bits (491), Expect = 4e-47
 Identities = 97/114 (85%), Positives = 105/114 (92%)
 Frame = +1

Query: 112 MEPMDIVGKSKEDVTLPKATMFKIIKEMMPQENVRVARDAQDLLVECCVEFINLLSSESN 291
           M+PMDIVGKSKEDV+LPK+TMFKIIKEM+P + VRVARDAQDLLVECCVEFINLLSSESN
Sbjct: 1   MDPMDIVGKSKEDVSLPKSTMFKIIKEMLPPD-VRVARDAQDLLVECCVEFINLLSSESN 59

Query: 292 EVCSREEKRTIAPEHVIKALEVLGFGDYIEEVYAAYEQHKAETLDSPKGGKLIG 453
           EVCSREEK+TIAPEHVIKAL  LGF +YIEEVYAAYEQHK +TLDSPK GK  G
Sbjct: 60  EVCSREEKKTIAPEHVIKALSDLGFREYIEEVYAAYEQHKLDTLDSPKAGKFTG 113


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