BLASTX nr result
ID: Coptis24_contig00020705
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00020705
(1699 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273767.1| PREDICTED: peroxisome biogenesis protein 1-l... 292 e-117
emb|CBI20540.3| unnamed protein product [Vitis vinifera] 276 e-112
ref|XP_002517570.1| peroxisome biogenesis factor, putative [Rici... 245 6e-97
ref|XP_003529444.1| PREDICTED: peroxisome biogenesis protein 1-l... 234 2e-95
ref|XP_002871329.1| peroxisome biogenesis protein PEX1 [Arabidop... 243 2e-91
>ref|XP_002273767.1| PREDICTED: peroxisome biogenesis protein 1-like [Vitis vinifera]
Length = 1134
Score = 292 bits (747), Expect(2) = e-117
Identities = 167/391 (42%), Positives = 239/391 (61%), Gaps = 7/391 (1%)
Frame = -1
Query: 1174 VQLVPGTEVVVAPKTRKTNVNSYHDSSILALNEEHCTAKALLRIQDPKLKWCHKFEINNV 995
VQLVPGTEV VAPK RK ++S+ ++ + + N++H AKALLR+QD K HK E+ V
Sbjct: 157 VQLVPGTEVAVAPKRRKKYLDSHKNALVQSSNKDHPIAKALLRVQDSGQKLIHKSEVKGV 216
Query: 994 DISVVLTSVAFIHPETAKKSVFGNLQLVVIYPRLVSKKSLRNQ---KNNSLAGKETRFGG 824
++ VVLT+V +IHPETA+ F +LQLV++ PR SK + + + S++ + G
Sbjct: 217 ELGVVLTNVVYIHPETARNYSFDSLQLVILVPRSPSKGNYNDTDMFRKKSISTAKEFSDG 276
Query: 823 LSKKDISKHTVVRLVYSDLVARGHIMLPQSLRYYLRADLHSWLYLKSCHITPKKDAPLFT 644
L+ K VVRL+ S+ VA+GH+M+ QSLR+YLR LHSW+Y+K C I KK+ L +
Sbjct: 277 LADKKEPCQVVVRLLISESVAKGHVMMAQSLRHYLRTGLHSWVYMKRCDINLKKEISLLS 336
Query: 643 LSPCRFKMLEKENTLQENG---LSSVENHGNKTRHTSLGTNLTPDTEINDWSMHEKLLTS 473
LSPC+FKM EK L+ENG L S+ NH KT+ L TN I+DWS HE+ +
Sbjct: 337 LSPCQFKMFEKNKALEENGLEVLDSLTNH--KTKSMLLETNSDTYMNISDWSTHEEFAAA 394
Query: 472 VFPHPPEDDFQEGKERSCTAKGQLGLLQAWLSGQLKAIALNTGIDMSSLVLGNETLLQFE 293
+ P + ++ +S + KG LLQAW L AI N G ++ SLV+GNETLL F
Sbjct: 395 LSFESPGSEDEKTSSQSGSRKGLQSLLQAWFLAHLDAINSNAGTEIDSLVVGNETLLHFN 454
Query: 292 VIGDKFQSHEEKQVSSGHSSETGIKTRKPPFGLLYLLA-SDESSHDGQQCTYELFIKDEH 116
V DKF + + Q SS SS+ +LY+LA S+ES H G+ YEL + +
Sbjct: 455 VTSDKFGTLGKFQASSNGSSKNRSSYGDLSVEILYILAISEESQHSGKFNAYELSFPERN 514
Query: 115 KGIDDIKHLDMLVENLKLGDPLYLDSVNEKT 23
K +++ +L++LV NL+LG+P+ + E+T
Sbjct: 515 KRNNNLGNLELLVGNLRLGEPVSFYCMKERT 545
Score = 157 bits (397), Expect(2) = e-117
Identities = 82/157 (52%), Positives = 108/157 (68%)
Frame = -2
Query: 1644 MEFEVRVVGGIDSCFVXXXXXXXXXXXSTHTCNILPPLLALDLHSQDHNHVWHLXXXXXX 1465
ME VR VGGI+SCFV ST + +LPP+LAL+L S + N VW +
Sbjct: 1 MELAVRTVGGIESCFVSLPLPLIQTLQSTSS-GLLPPVLALELRSSN-NDVWVVAWSGSA 58
Query: 1464 XXXXSIEIAQQLANCISLPNYTIVHVKAISYLPKASTVTIEPCGEDDWEVMELNSELAED 1285
SIE+A+Q A CISLP++T V V+A++ LPKA+ VTIEP EDDWEV+ELN+E AE
Sbjct: 59 STSSSIEVARQFAECISLPDHTAVQVRAVANLPKATLVTIEPHTEDDWEVLELNAEHAEA 118
Query: 1284 VILKQVGVVHQGMKFPLWVHGHSVAVFLVVSTYPENS 1174
ILKQ+G+VH+ M+FPLW+HG + FLVVST+P+ +
Sbjct: 119 AILKQIGIVHEAMRFPLWLHGRTTITFLVVSTFPKKA 155
>emb|CBI20540.3| unnamed protein product [Vitis vinifera]
Length = 1114
Score = 276 bits (706), Expect(2) = e-112
Identities = 160/391 (40%), Positives = 231/391 (59%), Gaps = 7/391 (1%)
Frame = -1
Query: 1174 VQLVPGTEVVVAPKTRKTNVNSYHDSSILALNEEHCTAKALLRIQDPKLKWCHKFEINNV 995
VQLVPGTEV VAPK RK ++S+ ++ + + N++H AKALLR+QD K HK E+ V
Sbjct: 157 VQLVPGTEVAVAPKRRKKYLDSHKNALVQSSNKDHPIAKALLRVQDSGQKLIHKSEVKGV 216
Query: 994 DISVVLTSVAFIHPETAKKSVFGNLQLVVIYPRLVSKKSLRNQ---KNNSLAGKETRFGG 824
++ VVLT+V +IHPETA+ F +LQLV++ PR SK + + + S++ + G
Sbjct: 217 ELGVVLTNVVYIHPETARNYSFDSLQLVILVPRSPSKGNYNDTDMFRKKSISTAKEFSDG 276
Query: 823 LSKKDISKHTVVRLVYSDLVARGHIMLPQSLRYYLRADLHSWLYLKSCHITPKKDAPLFT 644
L+ K VVRL+ S+ VA+GH+M+ QSLR+YLR LHSW+Y+K C I KK+ L +
Sbjct: 277 LADKKEPCQVVVRLLISESVAKGHVMMAQSLRHYLRTGLHSWVYMKRCDINLKKEISLLS 336
Query: 643 LSPCRFKMLEKENTLQENG---LSSVENHGNKTRHTSLGTNLTPDTEINDWSMHEKLLTS 473
LSPC+FKM EK L+ENG L S+ NH KT+ L TN I+DWS HE+ +
Sbjct: 337 LSPCQFKMFEKNKALEENGLEVLDSLTNH--KTKSMLLETNSDTYMNISDWSTHEEFAAA 394
Query: 472 VFPHPPEDDFQEGKERSCTAKGQLGLLQAWLSGQLKAIALNTGIDMSSLVLGNETLLQFE 293
+ P + ++ +S + KG LLQAW L AI N G ++ SLV+GNETLL F
Sbjct: 395 LSFESPGSEDEKTSSQSGSRKGLQSLLQAWFLAHLDAINSNAGTEIDSLVVGNETLLHFN 454
Query: 292 VIGDKFQSHEEKQVSSGHSSETGIKTRKPPFGLLYLLA-SDESSHDGQQCTYELFIKDEH 116
V D + + +LY+LA S+ES H G+ YEL + +
Sbjct: 455 VTSDNYGDLSVE--------------------ILYILAISEESQHSGKFNAYELSFPERN 494
Query: 115 KGIDDIKHLDMLVENLKLGDPLYLDSVNEKT 23
K +++ +L++LV NL+LG+P+ + E+T
Sbjct: 495 KRNNNLGNLELLVGNLRLGEPVSFYCMKERT 525
Score = 157 bits (397), Expect(2) = e-112
Identities = 82/157 (52%), Positives = 108/157 (68%)
Frame = -2
Query: 1644 MEFEVRVVGGIDSCFVXXXXXXXXXXXSTHTCNILPPLLALDLHSQDHNHVWHLXXXXXX 1465
ME VR VGGI+SCFV ST + +LPP+LAL+L S + N VW +
Sbjct: 1 MELAVRTVGGIESCFVSLPLPLIQTLQSTSS-GLLPPVLALELRSSN-NDVWVVAWSGSA 58
Query: 1464 XXXXSIEIAQQLANCISLPNYTIVHVKAISYLPKASTVTIEPCGEDDWEVMELNSELAED 1285
SIE+A+Q A CISLP++T V V+A++ LPKA+ VTIEP EDDWEV+ELN+E AE
Sbjct: 59 STSSSIEVARQFAECISLPDHTAVQVRAVANLPKATLVTIEPHTEDDWEVLELNAEHAEA 118
Query: 1284 VILKQVGVVHQGMKFPLWVHGHSVAVFLVVSTYPENS 1174
ILKQ+G+VH+ M+FPLW+HG + FLVVST+P+ +
Sbjct: 119 AILKQIGIVHEAMRFPLWLHGRTTITFLVVSTFPKKA 155
>ref|XP_002517570.1| peroxisome biogenesis factor, putative [Ricinus communis]
gi|223543202|gb|EEF44734.1| peroxisome biogenesis factor,
putative [Ricinus communis]
Length = 1137
Score = 245 bits (626), Expect(2) = 6e-97
Identities = 153/402 (38%), Positives = 233/402 (57%), Gaps = 11/402 (2%)
Frame = -1
Query: 1174 VQLVPGTEVVVAPKTRKTNVNSYHDSSILALNEEHCTAKALLRIQDPKLKWCHKFEINNV 995
VQLVPGTEV VAPK RKT++N + + ++E KALLR+QD + H+ E+ V
Sbjct: 159 VQLVPGTEVAVAPKRRKTDLNK---QDLQSSSKEFKITKALLRLQDSDRRLLHRREVEGV 215
Query: 994 DISVVLTSVAFIHPETAKKSVFGNLQLVVIYPRLVSKKSLRNQKN------NSLAGKETR 833
++ VVLTSVA+IHPETA + +LQLV I PRL SK+++R ++ NS A KE +
Sbjct: 216 ELGVVLTSVAYIHPETATRFSLDSLQLVTIVPRLSSKETIRTPESDVSRTKNSSALKEIK 275
Query: 832 FGGLSKKDISKHTVVRLVYSDLVARGHIMLPQSLRYYLRADLHSWLYLKSCHITPKKDAP 653
L+ K + +VR+V+SD VA+GH+M+ +SLR YL A LHSW+YLK C + K+D
Sbjct: 276 NDILTDKKEYRQAIVRIVFSDSVAKGHLMIARSLRLYLMASLHSWVYLKICTMDLKEDIT 335
Query: 652 LFTLSPCRFKMLEKENTLQENGLSSVENHGNKTRHTSLGTNLTPDTEINDWSMHEKLLTS 473
+LSPC FKM ++N +++N L ++ + + DWS+H+++L +
Sbjct: 336 SLSLSPCHFKMPGQDNAIEKNSLEVLDQRIIQKPRNLVSGGSGSYMGTVDWSVHDRILAA 395
Query: 472 VFPHPPEDDFQEGKERSCTAKGQLGLLQAWLSGQLKAIALNTGIDMSSLVLGNETLLQFE 293
+ P + QE +S KG LLQAW QL AIA G + +S++LG ET+L FE
Sbjct: 396 LSNDFPCEGGQETIYQSNNRKGLRRLLQAWFLAQLDAIASFAGSEANSVILGKETILHFE 455
Query: 292 VIGDKFQSHEEKQVSSGHSSETGIKTRKP----PFGLLYLLA-SDESSHDGQQCTYELFI 128
V G +S + ++ + +S I+ RK P L++L S+ES H Q C+Y+L
Sbjct: 456 VKGCDVESDRKDEILATSNSNGLIEKRKNNGELPLEFLFVLTISEESMHGRQACSYKLSF 515
Query: 127 KDEHKGIDDIKHLDMLVENLKLGDPLYLDSVNEKTLKGSLSS 2
+ K D++ ++ L LKLG P+ + ++ E+ +S+
Sbjct: 516 DERKK--DNLGVME-LFGKLKLGGPVSMYALKERNSHKGISA 554
Score = 137 bits (345), Expect(2) = 6e-97
Identities = 70/157 (44%), Positives = 98/157 (62%)
Frame = -2
Query: 1644 MEFEVRVVGGIDSCFVXXXXXXXXXXXSTHTCNILPPLLALDLHSQDHNHVWHLXXXXXX 1465
MEFEV+ V GI++CF+ ST + +L L+L S +H W +
Sbjct: 1 MEFEVKHVSGIENCFISLPIQLIQTLESTRPGDFHSQILTLELRSSTTDHQWVVAWSGAT 60
Query: 1464 XXXXSIEIAQQLANCISLPNYTIVHVKAISYLPKASTVTIEPCGEDDWEVMELNSELAED 1285
+IE+A+Q A+CISLP+ V V+A+S + A+ VTIEP EDDWEV+ELN++LAE
Sbjct: 61 SSSSAIEVARQFADCISLPDRISVKVRAVSNVASATLVTIEPSSEDDWEVLELNADLAEA 120
Query: 1284 VILKQVGVVHQGMKFPLWVHGHSVAVFLVVSTYPENS 1174
IL QV +VH+ MKFPLW+HG ++ F VVST P+ +
Sbjct: 121 AILNQVRIVHETMKFPLWLHGRTIITFHVVSTLPKKA 157
>ref|XP_003529444.1| PREDICTED: peroxisome biogenesis protein 1-like [Glycine max]
Length = 1130
Score = 234 bits (596), Expect(2) = 2e-95
Identities = 150/401 (37%), Positives = 232/401 (57%), Gaps = 10/401 (2%)
Frame = -1
Query: 1174 VQLVPGTEVVVAPKTRKTNVNSYHDSSILALNEEHCTAKALLRIQDPKLKWCHKFEINNV 995
VQL+PGTEV VAPK RK + +S DS + + N+EH TAK LLR+QDP + V
Sbjct: 160 VQLMPGTEVAVAPKRRKKSSDSAGDSHLDSSNKEH-TAKMLLRLQDPDGLCSTSTHVKGV 218
Query: 994 DISVVLTSVAFIHPETAKKSVFGNLQLVVIYPRLVSKKSLRNQKNNSLAGKETRF----- 830
++ V LTSVAF+HPETAKK F LQLV I PR V+K+++ ++N + K
Sbjct: 219 ELHVGLTSVAFVHPETAKKYSFNMLQLVSIVPR-VTKENVNISRSNIMKAKSGPATNEVE 277
Query: 829 GGLSKKDISKHTVVRLVYSDLVARGHIMLPQSLRYYLRADLHSWLYLKSCHITPKKDAPL 650
G + K + T+V+L+ S+ VA GH+M+ +SLR YLRA LHSW+YLK+C I +K P
Sbjct: 278 NGYTDKTEYRQTIVQLLISESVAEGHVMVAKSLRLYLRASLHSWVYLKACDIILEKSIPS 337
Query: 649 FTLSPCRFKMLEKENTLQENGLS---SVENHGNKTRHTSLGTNLTPDTEINDWSMHEKLL 479
+L PC+FK+L++EN ++++GL +NH ++ H + + DT DWS+ ++
Sbjct: 338 TSLFPCQFKLLKQENAVEKDGLEVFHGHKNHIDENLHAKPTSGVFVDT--IDWSIQNEVA 395
Query: 478 TSVFPHPPEDDFQEGKERSCTAKGQLGLLQAWLSGQLKAIALNTGIDMSSLVLGNETLLQ 299
++ +E +S +G L++ W QLKAI +G+++SSL++GN+TLL
Sbjct: 396 AALSDESSYKAEEEATNQSQNQRGLQSLVRLWYIMQLKAITSISGMEVSSLIIGNKTLLH 455
Query: 298 FEVIGDKFQSHEEKQVSSGHSSETGIKTRKPPFGLLYLLASDESSHDGQQCTYELFI--K 125
FEV K +++ + Q++ S +G K L L +E H G+ YE+ + +
Sbjct: 456 FEVSCYKLRNNGKVQLAYNSSENSG----KAAEMLFLLTFGEEYLHHGKLNAYEVALGGR 511
Query: 124 DEHKGIDDIKHLDMLVENLKLGDPLYLDSVNEKTLKGSLSS 2
+ I D+K L E +KL DP+ + S+ E+ + +SS
Sbjct: 512 LNNINIGDLK----LFERMKLCDPVSIHSIEERASEDHISS 548
Score = 143 bits (361), Expect(2) = 2e-95
Identities = 78/158 (49%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Frame = -2
Query: 1644 MEFEVRVVGGIDSCFVXXXXXXXXXXXSTHTCNILPPLLALDLHSQDHN-HVWHLXXXXX 1468
ME EV+VVGGIDSCFV ST + I P +LAL+L S H H W +
Sbjct: 1 MELEVQVVGGIDSCFVSLPLSLIQTLQSTRSSPI-PQILALELRSPTHPPHTWFVAWSGA 59
Query: 1467 XXXXXS-IEIAQQLANCISLPNYTIVHVKAISYLPKASTVTIEPCGEDDWEVMELNSELA 1291
S IE++ Q A C+SLPN+ V V+A +P AS VTIEP EDDWE++ELN++ A
Sbjct: 60 TSSSSSAIEVSPQFAECVSLPNHATVQVRAAPNVPHASLVTIEPHTEDDWEILELNADQA 119
Query: 1290 EDVILKQVGVVHQGMKFPLWVHGHSVAVFLVVSTYPEN 1177
E IL QV +VH+GM+FPLW+HGH+V F V S +P+N
Sbjct: 120 EAQILSQVRIVHEGMRFPLWLHGHTVITFQVASVFPKN 157
>ref|XP_002871329.1| peroxisome biogenesis protein PEX1 [Arabidopsis lyrata subsp. lyrata]
gi|297317166|gb|EFH47588.1| peroxisome biogenesis protein
PEX1 [Arabidopsis lyrata subsp. lyrata]
Length = 1122
Score = 243 bits (621), Expect(2) = 2e-91
Identities = 146/389 (37%), Positives = 220/389 (56%), Gaps = 7/389 (1%)
Frame = -1
Query: 1174 VQLVPGTEVVVAPKTRKTNVNSYHDSSILALNEEHCT-AKALLRIQDPKLKWCHKFEINN 998
VQLVPGTEV VAPK R N+ + E+ CT KALLR+QD + ++
Sbjct: 157 VQLVPGTEVAVAPKRRDRNLKAKKSQ------EKECTNVKALLRVQDTGRSAFREADVKG 210
Query: 997 VDISVVLTSVAFIHPETAKKSVFGNLQLVVIYPRLVSKKSLRNQK----NNSLAGKETRF 830
++ V LTSVA+IHPETAKK +LQL+ + PR+ K + + + NS A K
Sbjct: 211 FELRVALTSVAYIHPETAKKYSIESLQLISVSPRIPLKGTAKKDEALNIKNSGASKVAEN 270
Query: 829 GGLSKKDISKHTVVRLVYSDLVARGHIMLPQSLRYYLRADLHSWLYLKSCHITPKKDAPL 650
G S K + T++RLV+SDLVA+GH+M+ +SLR YL A LHSW+YL+ C++ K+ P
Sbjct: 271 GTSSAKKEPRQTILRLVFSDLVAKGHLMMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPA 330
Query: 649 FTLSPCRFKMLEKENTLQENGLSSVENHGNKTRHTSLGTNLTPDTEINDWSMHEKLLTSV 470
+LSPC FK+ E E L + G ++ NH + + + L+ ++ DWS+H+K++T++
Sbjct: 331 LSLSPCVFKISENEKVL-DRGTDTLGNHNSIRNCSHPPSGLSTYMDVVDWSVHDKVVTAL 389
Query: 469 FPHPPEDDFQEGKERSCTAKGQLG-LLQAWLSGQLKAIALNTGIDMSSLVLGNETLLQFE 293
D+ + K +L L + W QL AIA TG+D+SSL++G ET FE
Sbjct: 390 SSEGLHDEGNQVNAYQVKNKKKLECLTRLWSLAQLDAIASVTGVDVSSLIVGRETFFHFE 449
Query: 292 VIGDKFQSHEEKQVSSGHSSETGIKTRKPPFGLLYLL-ASDESSHDGQQCTYELFIKDEH 116
V G + + Q S E+G K + P +LY++ SDES + Y+L + D
Sbjct: 450 VRGPESYKFRDGQPSVNDRWESGKKDKNTPLEILYVMTVSDESLLGDKFTGYDLSL-DRS 508
Query: 115 KGIDDIKHLDMLVENLKLGDPLYLDSVNE 29
+ D++ H++ ++E + LGDP+Y S E
Sbjct: 509 EKSDNVVHIEPVLEKMNLGDPIYFTSAKE 537
Score = 120 bits (302), Expect(2) = 2e-91
Identities = 69/153 (45%), Positives = 93/153 (60%)
Frame = -2
Query: 1641 EFEVRVVGGIDSCFVXXXXXXXXXXXSTHTCNILPPLLALDLHSQDHNHVWHLXXXXXXX 1462
E V V G+D CFV ST + + LPPLL ++L S D W +
Sbjct: 4 EAVVSTVAGVD-CFVSLPRQLLHALQSTSS-SPLPPLLPVELRSGDRR--WSVAWSGSSS 59
Query: 1461 XXXSIEIAQQLANCISLPNYTIVHVKAISYLPKASTVTIEPCGEDDWEVMELNSELAEDV 1282
+IE+A+ A ISLP+ T+V V+ + +PKA+ VT+EP EDDWEV+ELN+ELAE
Sbjct: 60 SSSAIEVARVFAETISLPDATVVQVRVLPNVPKATLVTVEPETEDDWEVLELNAELAEAA 119
Query: 1281 ILKQVGVVHQGMKFPLWVHGHSVAVFLVVSTYP 1183
IL QV ++H+ MKFPLW+H +V F VVST+P
Sbjct: 120 ILSQVRILHETMKFPLWLHDRTVISFAVVSTFP 152