BLASTX nr result

ID: Coptis24_contig00020696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020696
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33333.3| unnamed protein product [Vitis vinifera]              347   1e-93
ref|XP_002282961.1| PREDICTED: uncharacterized protein LOC100258...   346   4e-93
ref|XP_002285613.1| PREDICTED: uncharacterized protein LOC100261...   342   6e-92
ref|XP_002303806.1| predicted protein [Populus trichocarpa] gi|2...   337   2e-90
ref|XP_004134021.1| PREDICTED: uncharacterized protein LOC101219...   327   2e-87

>emb|CBI33333.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score =  347 bits (891), Expect = 1e-93
 Identities = 175/221 (79%), Positives = 192/221 (86%), Gaps = 4/221 (1%)
 Frame = -3

Query: 653 EPVLELYIHDILGGSNPTARPITGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGAIPT 474
           E V+ELY+HDILGGS+PTARP+TGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGA+PT
Sbjct: 35  EHVIELYMHDILGGSSPTARPVTGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGALPT 94

Query: 473 VNANGVPXXXXXXXXXXXGNSNAQ----TVNGRRTGTQLGPDGLGLGFGTITVIDDMLTS 306
           VN NG+P           GN N +      NG+ T TQLGPDGLGLGFGTITVIDD+LTS
Sbjct: 95  VNTNGIPLGTGLAGTNFVGNPNRKPNDPNQNGK-TATQLGPDGLGLGFGTITVIDDVLTS 153

Query: 305 GPDLGSQSIGKAQGVYVASSADGTTQMMAFSAMIEGGEYGDSLNFYGVYKIGSTISRLSV 126
           GP+LGSQSIGKAQGVYVASSADGTTQMMAF+AM+EGGEYGD+LNF+GVYKIGS +SRLSV
Sbjct: 154 GPELGSQSIGKAQGVYVASSADGTTQMMAFTAMMEGGEYGDNLNFFGVYKIGSAMSRLSV 213

Query: 125 TGGTGKFKNASGFAEVRPLVAPGQHVTDGAEALLRITVHLT 3
           TGGTGKFKNA GF EVRPL+  GQHVTDGAE LLRITVHL+
Sbjct: 214 TGGTGKFKNARGFGEVRPLIPSGQHVTDGAETLLRITVHLS 254


>ref|XP_002282961.1| PREDICTED: uncharacterized protein LOC100258026 [Vitis vinifera]
          Length = 249

 Score =  346 bits (887), Expect = 4e-93
 Identities = 171/217 (78%), Positives = 186/217 (85%)
 Frame = -3

Query: 653 EPVLELYIHDILGGSNPTARPITGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGAIPT 474
           E V+ELY+HDILGGS+PTARP+TGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGA+PT
Sbjct: 35  EHVIELYMHDILGGSSPTARPVTGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGALPT 94

Query: 473 VNANGVPXXXXXXXXXXXGNSNAQTVNGRRTGTQLGPDGLGLGFGTITVIDDMLTSGPDL 294
           VN NG+P           GN N    N  R  TQLGPDGLGLGFGTITVIDD+LTSGPDL
Sbjct: 95  VNTNGIPLGTGLAGTNFVGNPNR---NNGRPATQLGPDGLGLGFGTITVIDDVLTSGPDL 151

Query: 293 GSQSIGKAQGVYVASSADGTTQMMAFSAMIEGGEYGDSLNFYGVYKIGSTISRLSVTGGT 114
           GSQ +GKAQGVYVASS DGTTQMM F+AMIEGGEYGDS+NF+GVYKIGST+SRLSVTGGT
Sbjct: 152 GSQQMGKAQGVYVASSVDGTTQMMTFTAMIEGGEYGDSINFFGVYKIGSTMSRLSVTGGT 211

Query: 113 GKFKNASGFAEVRPLVAPGQHVTDGAEALLRITVHLT 3
           GKFKNA GFAE+RPL+  GQHVTDG E LLRIT HL+
Sbjct: 212 GKFKNACGFAEIRPLIPSGQHVTDGVETLLRITAHLS 248


>ref|XP_002285613.1| PREDICTED: uncharacterized protein LOC100261265 [Vitis vinifera]
          Length = 253

 Score =  342 bits (877), Expect = 6e-92
 Identities = 174/219 (79%), Positives = 188/219 (85%), Gaps = 1/219 (0%)
 Frame = -3

Query: 656 DEPVLELYIHDILGGSNPTARPITGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGAIP 477
           + PVLELY+HDILGG+NPTARPITGLLGNIYSGQVPFARPVGF PPK GVAIPNANGAIP
Sbjct: 35  EAPVLELYMHDILGGNNPTARPITGLLGNIYSGQVPFARPVGFNPPKDGVAIPNANGAIP 94

Query: 476 TVNAN-GVPXXXXXXXXXXXGNSNAQTVNGRRTGTQLGPDGLGLGFGTITVIDDMLTSGP 300
            VN N G+P           G  N    NG+ T TQLGPDGLGLGFGTITVIDD+LTSGP
Sbjct: 95  LVNGNNGIPLGTGLAGSAFGGKPNDPNQNGK-TATQLGPDGLGLGFGTITVIDDVLTSGP 153

Query: 299 DLGSQSIGKAQGVYVASSADGTTQMMAFSAMIEGGEYGDSLNFYGVYKIGSTISRLSVTG 120
           +LGSQSIGKAQGVYVASSADGTTQMMAF+AM+EGGEYGD+LNF+GVYKIGS +SRLSVTG
Sbjct: 154 ELGSQSIGKAQGVYVASSADGTTQMMAFTAMMEGGEYGDNLNFFGVYKIGSAMSRLSVTG 213

Query: 119 GTGKFKNASGFAEVRPLVAPGQHVTDGAEALLRITVHLT 3
           GTGKFKNA GF EVRPL+  GQHVTDGAE LLRITVHL+
Sbjct: 214 GTGKFKNARGFGEVRPLIPSGQHVTDGAETLLRITVHLS 252


>ref|XP_002303806.1| predicted protein [Populus trichocarpa] gi|222841238|gb|EEE78785.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  337 bits (864), Expect = 2e-90
 Identities = 170/217 (78%), Positives = 186/217 (85%), Gaps = 1/217 (0%)
 Frame = -3

Query: 653 EPVLELYIHDILGGSNPTARPITGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGAIPT 474
           EPVLELY+HDILGGSNPTARPITGLLGNIYSGQVPFARPVGF+PPKG VAIPNANGA+PT
Sbjct: 35  EPVLELYMHDILGGSNPTARPITGLLGNIYSGQVPFARPVGFVPPKGAVAIPNANGALPT 94

Query: 473 VNA-NGVPXXXXXXXXXXXGNSNAQTVNGRRTGTQLGPDGLGLGFGTITVIDDMLTSGPD 297
           VN  NG+P           GN N Q  NG+   TQLGPDGLGLGFGTITVIDD LT+ P+
Sbjct: 95  VNGLNGIPLGTGLAGTTFAGNPNGQNTNGQ-IQTQLGPDGLGLGFGTITVIDDTLTNSPE 153

Query: 296 LGSQSIGKAQGVYVASSADGTTQMMAFSAMIEGGEYGDSLNFYGVYKIGSTISRLSVTGG 117
           LGSQ +GKAQGVYVASSADG+TQMMAF+AM EGGE+GDSLNFYG+Y+IGS +SRLSVTGG
Sbjct: 154 LGSQQLGKAQGVYVASSADGSTQMMAFTAMFEGGEFGDSLNFYGIYRIGSAMSRLSVTGG 213

Query: 116 TGKFKNASGFAEVRPLVAPGQHVTDGAEALLRITVHL 6
           TGKFKNA GFAEVR L+ PGQ VTDGAE LLRI+VHL
Sbjct: 214 TGKFKNAIGFAEVRGLIPPGQAVTDGAETLLRISVHL 250


>ref|XP_004134021.1| PREDICTED: uncharacterized protein LOC101219771 [Cucumis sativus]
           gi|449487506|ref|XP_004157660.1| PREDICTED:
           uncharacterized LOC101219771 [Cucumis sativus]
          Length = 249

 Score =  327 bits (838), Expect = 2e-87
 Identities = 165/218 (75%), Positives = 182/218 (83%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653 EPVLELYIHDILGGSNPTARPITGLLGNIYSGQVPFARPVGFLPPKGGVAIPNANGAIPT 474
           EPVLE Y+HDILGG++PTARPITGLLGNIY+GQVPFA P+GFLPP GGVAIPNANGA+PT
Sbjct: 35  EPVLEFYMHDILGGASPTARPITGLLGNIYTGQVPFATPIGFLPPDGGVAIPNANGALPT 94

Query: 473 VNA-NGVPXXXXXXXXXXXGNSNAQTVNGRRTGTQLGPDGLGLGFGTITVIDDMLTSGPD 297
           VN  NG+P           GN N Q V      TQLGPDGLGLGFGTITVIDD+LT+ P+
Sbjct: 95  VNGINGIPLGTGLSGTSFAGNPNPQNV----PQTQLGPDGLGLGFGTITVIDDVLTTSPE 150

Query: 296 LGSQSIGKAQGVYVASSADGTTQMMAFSAMIEGGEYGDSLNFYGVYKIGSTISRLSVTGG 117
           LGSQSIG+AQGVYVASSADGTTQMMAF+AM+EGGEYGDSLNFYGV++IGS  S LSVTGG
Sbjct: 151 LGSQSIGQAQGVYVASSADGTTQMMAFTAMVEGGEYGDSLNFYGVFRIGSPSSHLSVTGG 210

Query: 116 TGKFKNASGFAEVRPLVAPGQHVTDGAEALLRITVHLT 3
           TGKFKNA G AEVR L+ PGQHV DGAE LLR+ VHLT
Sbjct: 211 TGKFKNARGIAEVRSLIPPGQHVADGAETLLRVLVHLT 248


Top