BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020669
         (1233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282464.1| PREDICTED: pentatricopeptide repeat-containi...   533   e-149
emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]   526   e-147
ref|XP_003524191.1| PREDICTED: pentatricopeptide repeat-containi...   509   e-142
ref|XP_004142608.1| PREDICTED: pentatricopeptide repeat-containi...   509   e-142
ref|XP_003532746.1| PREDICTED: pentatricopeptide repeat-containi...   508   e-141

>ref|XP_002282464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g25580
            [Vitis vinifera]
          Length = 807

 Score =  533 bits (1374), Expect = e-149
 Identities = 254/399 (63%), Positives = 327/399 (81%), Gaps = 4/399 (1%)
 Frame = -1

Query: 1233 YVGTIDELDGFCKENKVKDAVEVLALLEKNGITVDLPRYLLLIRMCGEAGVPQYAKSVHD 1054
            Y GT++E+D FCK+ KVK+A+EVL LLEK    VDLPRYL L++ CGEA   Q AK+VH+
Sbjct: 409  YSGTLEEVDDFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRLMKACGEAKALQEAKAVHE 468

Query: 1053 HLIRSLGHVELSVHNKVLEMYFQCGSVSDAFEVFEKMNERNLTTWDTMITGLAINGHGED 874
             LI+S+  +++S +N++LEMY +CGS+ DA+ VF+KM ERNLT+WDTMIT  A N  GE+
Sbjct: 469  SLIKSVSPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNLTSWDTMITWFAKNDLGEE 528

Query: 873  AIDLFTRFKKMGLRPDGQIFVGVFLACSVLFDIDEGMLHFKSMSKAFGIVPTMEHYVSVV 694
            AIDLF +FK+ GL+PDGQ+F+GVF+ACSVL D+ EGMLHF SMSK +GIVP+M+HY S+V
Sbjct: 529  AIDLFIQFKESGLKPDGQMFIGVFMACSVLGDVIEGMLHFNSMSKDYGIVPSMKHYASMV 588

Query: 693  NMLGSTGCLDEAMEFIEKMPFEPNVDVWETLMHLCRIHGNTELGNYCAELVDFLEPSRLT 514
            +MLG++G LDEA+EF+EKMP EP+VDVWETLM++CR+ GN E+G+ CAELV+ LEPSRLT
Sbjct: 589  DMLGNSGYLDEALEFVEKMPLEPSVDVWETLMNICRVQGNMEIGDRCAELVEHLEPSRLT 648

Query: 513  DHSRKGLLPVKGSELEKVREKNKLSGE-FQEMKTTVQEYRAGDKCNPQNVSL---LRGLN 346
            + S+ GL+PVK S+LEK +EK KL+ +   E+++ V EYRAGD  +P+N  +   LRGL 
Sbjct: 649  EQSKAGLVPVKASDLEKEKEKKKLASQNLLEVRSRVHEYRAGDTSHPENDKIYAKLRGLK 708

Query: 345  AQMKEAGYVPELRHCLHDVDEESKEVGLQSHSERLAMAQGLITTSTRMPLRIIKNLRVCV 166
            AQMKEAGYVPE R  LHD+D+E KE  L +HSERLA+A GL+++  R P+R+IKNLRVC 
Sbjct: 709  AQMKEAGYVPETRFVLHDIDQEGKEEALLAHSERLAVAYGLLSSPARSPIRVIKNLRVCG 768

Query: 165  DCHNALKIMSKIVGRELIIRDAKRFHHFKDGLCSCKDFW 49
            DCH ALKI+SK+VGRELIIRDAKRFHHFKDGLCSC+D+W
Sbjct: 769  DCHTALKIISKLVGRELIIRDAKRFHHFKDGLCSCRDYW 807


>emb|CAN80315.1| hypothetical protein VITISV_020760 [Vitis vinifera]
          Length = 1148

 Score =  526 bits (1356), Expect = e-147
 Identities = 252/398 (63%), Positives = 325/398 (81%), Gaps = 4/398 (1%)
 Frame = -1

Query: 1233 YVGTIDELDGFCKENKVKDAVEVLALLEKNGITVDLPRYLLLIRMCGEAGVPQYAKSVHD 1054
            Y GT++E+D FCK+ KVK+A+EVL LLEK    VDLPRYL L++ CGEA   Q AK+VH+
Sbjct: 409  YSGTLEEVDDFCKDGKVKEAIEVLGLLEKQHTPVDLPRYLRLMKACGEAKALQEAKAVHE 468

Query: 1053 HLIRSLGHVELSVHNKVLEMYFQCGSVSDAFEVFEKMNERNLTTWDTMITGLAINGHGED 874
             LI+S+  +++S +N++LEMY +CGS+ DA+ VF+KM ERNLT+WDTMIT  A N  GE+
Sbjct: 469  SLIKSVSPLKVSTYNRILEMYSKCGSMDDAYAVFKKMPERNLTSWDTMITWFAKNDLGEE 528

Query: 873  AIDLFTRFKKMGLRPDGQIFVGVFLACSVLFDIDEGMLHFKSMSKAFGIVPTMEHYVSVV 694
            AIDLF +FK+ GL+PD Q+F+GVF+ACSVL D+ EGMLHF SMSK +GIVP+M+HY S+V
Sbjct: 529  AIDLFIQFKESGLKPDXQMFIGVFMACSVLGDVIEGMLHFNSMSKDYGIVPSMKHYASMV 588

Query: 693  NMLGSTGCLDEAMEFIEKMPFEPNVDVWETLMHLCRIHGNTELGNYCAELVDFLEPSRLT 514
            +MLG++G LDEA+EF+EKMP EP+VDVWETLM++CR+ GN E+G+ CAELV+ LEPSRLT
Sbjct: 589  DMLGNSGYLDEALEFVEKMPLEPSVDVWETLMNICRVQGNMEIGDRCAELVEHLEPSRLT 648

Query: 513  DHSRKGLLPVKGSELEKVREKNKLSGE-FQEMKTTVQEYRAGDKCNPQNVSL---LRGLN 346
            + S+ GL+PVK S+LEK +EK KL+ +   E+++ V EYRAGD  +P+N  +   LRGL 
Sbjct: 649  EQSKAGLVPVKASDLEKEKEKKKLASQNLLEVRSRVHEYRAGDTSHPENDKIYAKLRGLK 708

Query: 345  AQMKEAGYVPELRHCLHDVDEESKEVGLQSHSERLAMAQGLITTSTRMPLRIIKNLRVCV 166
            AQMKEAGYVPE R  LHD+D+E KE  L +HSERLA+A GL+++  R P+R+IKNLRVC 
Sbjct: 709  AQMKEAGYVPETRFVLHDIDQEGKEEALLAHSERLAVAYGLLSSPARSPIRVIKNLRVCG 768

Query: 165  DCHNALKIMSKIVGRELIIRDAKRFHHFKDGLCSCKDF 52
            DCH ALKI+SK+VGRELIIRDAKRFHHFKDGLCSC+D+
Sbjct: 769  DCHTALKIISKLVGRELIIRDAKRFHHFKDGLCSCRDY 806


>ref|XP_003524191.1| PREDICTED: pentatricopeptide repeat-containing protein At2g25580-like
            [Glycine max]
          Length = 664

 Score =  509 bits (1312), Expect = e-142
 Identities = 249/399 (62%), Positives = 309/399 (77%), Gaps = 4/399 (1%)
 Frame = -1

Query: 1233 YVGTIDELDGFCKENKVKDAVEVLALLEKNGITVDLPRYLLLIRMCGEAGVPQYAKSVHD 1054
            Y  T++ELD FC E  VK+AV VL LLEK  I VDLPRYL L+  C E    + AK VH 
Sbjct: 266  YRATLEELDNFCIEGNVKEAVNVLELLEKLHIPVDLPRYLQLMHQCAENKSLEEAKIVHR 325

Query: 1053 HLIRSLGHVELSVHNKVLEMYFQCGSVSDAFEVFEKMNERNLTTWDTMITGLAINGHGED 874
            H  + L  +++S +N++LEMY +CGSV DA  +F  M ERNLTTWDTMIT LA NG  ED
Sbjct: 326  HTSQHLSPLQVSTYNRILEMYLECGSVDDALNIFNNMPERNLTTWDTMITQLAKNGFAED 385

Query: 873  AIDLFTRFKKMGLRPDGQIFVGVFLACSVLFDIDEGMLHFKSMSKAFGIVPTMEHYVSVV 694
            +IDLFT+FK +GL+PDGQ+F+GV  ACSVL DIDEGMLHF+SMSK +GIVP+M H+VSVV
Sbjct: 386  SIDLFTQFKNLGLKPDGQMFIGVLFACSVLGDIDEGMLHFESMSKDYGIVPSMTHFVSVV 445

Query: 693  NMLGSTGCLDEAMEFIEKMPFEPNVDVWETLMHLCRIHGNTELGNYCAELVDFLEPSRLT 514
            +M+GS G LDEA EFIE+MP EP+ + WETLM+LCR+HGNT LG+ CAELV+ L+ SRL 
Sbjct: 446  DMIGSIGHLDEAFEFIERMPMEPSAETWETLMNLCRVHGNTGLGDRCAELVEQLDSSRLN 505

Query: 513  DHSRKGLLPVKGSELEKVREKNKL-SGEFQEMKTTVQEYRAGDKCNPQN---VSLLRGLN 346
            + S+ GL+PVK S+L K +EK  L S    E+++ V+EYRAGD  +P+N    +LLRGL 
Sbjct: 506  EQSKAGLVPVKASDLTKEKEKKNLASKNLLEVRSRVREYRAGDTSHPENDKIYALLRGLK 565

Query: 345  AQMKEAGYVPELRHCLHDVDEESKEVGLQSHSERLAMAQGLITTSTRMPLRIIKNLRVCV 166
            +QMKEAGYVPE +  LHD+D+E KE  L +HSERLA+A GL+ +  R P+R+IKNLRVC 
Sbjct: 566  SQMKEAGYVPETKFVLHDIDQEGKEEALLAHSERLAVAYGLLNSPARAPMRVIKNLRVCG 625

Query: 165  DCHNALKIMSKIVGRELIIRDAKRFHHFKDGLCSCKDFW 49
            DCH ALKI+SK+VGRELIIRDAKRFHHFKDGLCSC+D+W
Sbjct: 626  DCHTALKIISKLVGRELIIRDAKRFHHFKDGLCSCRDYW 664


>ref|XP_004142608.1| PREDICTED: pentatricopeptide repeat-containing protein At2g25580-like
            [Cucumis sativus]
          Length = 671

 Score =  509 bits (1311), Expect = e-142
 Identities = 249/397 (62%), Positives = 314/397 (79%), Gaps = 4/397 (1%)
 Frame = -1

Query: 1227 GTIDELDGFCKENKVKDAVEVLALLEKNGITVDLPRYLLLIRMCGEAGVPQYAKSVHDHL 1048
            G +++LD FCKE K+K+AV++L +LEK  I VDL RYL L+  CGEA   + AK V +++
Sbjct: 275  GPLEKLDEFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYV 334

Query: 1047 IRSLGHVELSVHNKVLEMYFQCGSVSDAFEVFEKMNERNLTTWDTMITGLAINGHGEDAI 868
            I+S  HV++S +NK+LEMY +CGS+ DA+ +F KM  RN+T+WDTMIT LA NG GEDAI
Sbjct: 335  IKSQTHVKVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAI 394

Query: 867  DLFTRFKKMGLRPDGQIFVGVFLACSVLFDIDEGMLHFKSMSKAFGIVPTMEHYVSVVNM 688
            DLF  FKK GLRPDG++F+GVF ACSVL D DEGMLHF+SM+K +GI P+M HYVS+V+M
Sbjct: 395  DLFYEFKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDM 454

Query: 687  LGSTGCLDEAMEFIEKMPFEPNVDVWETLMHLCRIHGNTELGNYCAELVDFLEPSRLTDH 508
            LGS G +DEA+EFIEKMP EP VD+WET+M++ R HG  ELG+ C ELV+ L+ SRL + 
Sbjct: 455  LGSIGFVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQ 514

Query: 507  SRKGLLPVKGSELEKVREKNKLSG-EFQEMKTTVQEYRAGDKCNPQN---VSLLRGLNAQ 340
            S+ GLLPVK S+LEK REK KL+     E+++ V EYRAGD  +P+N    +LLRGL  Q
Sbjct: 515  SKAGLLPVKASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQ 574

Query: 339  MKEAGYVPELRHCLHDVDEESKEVGLQSHSERLAMAQGLITTSTRMPLRIIKNLRVCVDC 160
            MKEAGY+PE R  LHD+D+E+K   L  HSERLA+A GLI++S R P+R+IKNLRVC DC
Sbjct: 575  MKEAGYIPETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDC 634

Query: 159  HNALKIMSKIVGRELIIRDAKRFHHFKDGLCSCKDFW 49
            H+ALKI+SKIVGRELIIRDAKRFHHFKDGLCSC+D+W
Sbjct: 635  HSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 671


>ref|XP_003532746.1| PREDICTED: pentatricopeptide repeat-containing protein At2g25580-like
            [Glycine max]
          Length = 664

 Score =  508 bits (1307), Expect = e-141
 Identities = 245/399 (61%), Positives = 312/399 (78%), Gaps = 4/399 (1%)
 Frame = -1

Query: 1233 YVGTIDELDGFCKENKVKDAVEVLALLEKNGITVDLPRYLLLIRMCGEAGVPQYAKSVHD 1054
            Y GT++ELD FC E  VK+AVEVL LLEK  I VDLPRYL L+  CGE    + AK+VH 
Sbjct: 266  YRGTLEELDNFCIEGNVKEAVEVLELLEKLDIPVDLPRYLQLMHQCGENKSLEEAKNVHR 325

Query: 1053 HLIRSLGHVELSVHNKVLEMYFQCGSVSDAFEVFEKMNERNLTTWDTMITGLAINGHGED 874
            H ++ L  +++S +N++LEMY +CGSV DA  +F  M ERNLTTWDTMIT LA NG  ED
Sbjct: 326  HALQHLSPLQVSTYNRILEMYLECGSVDDALNIFNNMPERNLTTWDTMITQLAKNGFAED 385

Query: 873  AIDLFTRFKKMGLRPDGQIFVGVFLACSVLFDIDEGMLHFKSMSKAFGIVPTMEHYVSVV 694
            +IDLFT+FK +GL+PDGQ+F+GV  AC +L DIDEGM HF+SM+K +GIVP+M H+VSVV
Sbjct: 386  SIDLFTQFKNLGLKPDGQMFIGVLFACGMLGDIDEGMQHFESMNKDYGIVPSMTHFVSVV 445

Query: 693  NMLGSTGCLDEAMEFIEKMPFEPNVDVWETLMHLCRIHGNTELGNYCAELVDFLEPSRLT 514
            +M+GS G LDEA EFIEKMP +P+ D+WETLM+LCR+HGNT LG+ CAELV+ L+ S L 
Sbjct: 446  DMIGSIGHLDEAFEFIEKMPMKPSADIWETLMNLCRVHGNTGLGDCCAELVEQLDSSCLN 505

Query: 513  DHSRKGLLPVKGSELEKVREKNKLSGE-FQEMKTTVQEYRAGDKCNPQN---VSLLRGLN 346
            + S+ GL+PVK S+L K +EK  L+ +   E+++ V+EYRAGD  +P++    +LLRGL 
Sbjct: 506  EQSKAGLVPVKASDLTKEKEKRTLTNKNLLEVRSRVREYRAGDTFHPESDKIYALLRGLK 565

Query: 345  AQMKEAGYVPELRHCLHDVDEESKEVGLQSHSERLAMAQGLITTSTRMPLRIIKNLRVCV 166
            +QMKEAGYVPE +  LHD+D+E KE  L +HSERLA+A GL+ +  R P+R+IKNLRVC 
Sbjct: 566  SQMKEAGYVPETKFVLHDIDQEGKEEALLAHSERLAIAYGLLNSPARAPMRVIKNLRVCG 625

Query: 165  DCHNALKIMSKIVGRELIIRDAKRFHHFKDGLCSCKDFW 49
            DCH ALKI+SK+VGRELIIRDAKRFHHF DGLCSC+D+W
Sbjct: 626  DCHTALKIISKLVGRELIIRDAKRFHHFNDGLCSCRDYW 664