BLASTX nr result
ID: Coptis24_contig00020667
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020667 (698 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI29860.3| unnamed protein product [Vitis vinifera] 335 4e-90 ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containi... 335 4e-90 ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containi... 319 4e-85 tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea m... 317 1e-84 ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea ma... 317 1e-84 >emb|CBI29860.3| unnamed protein product [Vitis vinifera] Length = 655 Score = 335 bits (860), Expect = 4e-90 Identities = 165/229 (72%), Positives = 191/229 (83%) Frame = -1 Query: 689 DYGIQPTMKHYGCMVDLLCRAGLVEEAYGFVETMHISPNSIVWRTLLMGCKKKGMLEKGE 510 ++GI P+M+ YGCMVDLLCRA LVE+A VETM ISPN ++WRTLL+GCKK L+K E Sbjct: 391 EFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSE 450 Query: 509 IVARRLLELEPLNAENYVLLSNLYAANSLWEKVSCVRMKMKEIGIKTLPGCSSIETDGFV 330 +VA+RLLELEP NAENY+LLSNLYA+ S WEK+S VR KMK +GIK +PGCSSIE DG V Sbjct: 451 VVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLV 510 Query: 329 HEFVVGDRSHPEENEIRKVLQDIAERVRRVGHDPWTSVVLHDVGDEEKEGALCEHSERLA 150 HEFV+GD SHPE E+R++L+DI++RV VGH P S VLH+V DEEKE ALCEHSERLA Sbjct: 511 HEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPGISDVLHNVVDEEKENALCEHSERLA 570 Query: 149 IAYGLLKTKAPVVIRVVKNLRVCPDCHEVTKIISKLYEREIIVRDRVRF 3 IAYGLLKTK P+ IR+VKNLRVC DCHEVTKIIS Y REIIVRDRVRF Sbjct: 571 IAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISAEYRREIIVRDRVRF 619 >ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065 [Vitis vinifera] Length = 564 Score = 335 bits (860), Expect = 4e-90 Identities = 165/229 (72%), Positives = 191/229 (83%) Frame = -1 Query: 689 DYGIQPTMKHYGCMVDLLCRAGLVEEAYGFVETMHISPNSIVWRTLLMGCKKKGMLEKGE 510 ++GI P+M+ YGCMVDLLCRA LVE+A VETM ISPN ++WRTLL+GCKK L+K E Sbjct: 322 EFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSE 381 Query: 509 IVARRLLELEPLNAENYVLLSNLYAANSLWEKVSCVRMKMKEIGIKTLPGCSSIETDGFV 330 +VA+RLLELEP NAENY+LLSNLYA+ S WEK+S VR KMK +GIK +PGCSSIE DG V Sbjct: 382 VVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLV 441 Query: 329 HEFVVGDRSHPEENEIRKVLQDIAERVRRVGHDPWTSVVLHDVGDEEKEGALCEHSERLA 150 HEFV+GD SHPE E+R++L+DI++RV VGH P S VLH+V DEEKE ALCEHSERLA Sbjct: 442 HEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPGISDVLHNVVDEEKENALCEHSERLA 501 Query: 149 IAYGLLKTKAPVVIRVVKNLRVCPDCHEVTKIISKLYEREIIVRDRVRF 3 IAYGLLKTK P+ IR+VKNLRVC DCHEVTKIIS Y REIIVRDRVRF Sbjct: 502 IAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISAEYRREIIVRDRVRF 550 >ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like [Cucumis sativus] Length = 564 Score = 319 bits (817), Expect = 4e-85 Identities = 158/229 (68%), Positives = 188/229 (82%) Frame = -1 Query: 689 DYGIQPTMKHYGCMVDLLCRAGLVEEAYGFVETMHISPNSIVWRTLLMGCKKKGMLEKGE 510 ++GI+P+++HYGC VDLLCR+GLVEEAY TM I PN+ WR+LLMGCKKK +L GE Sbjct: 322 EFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGE 381 Query: 509 IVARRLLELEPLNAENYVLLSNLYAANSLWEKVSCVRMKMKEIGIKTLPGCSSIETDGFV 330 IVAR LLELEPLNAENY+++SNLY++ S WEK+S +R MKE IK +PGCSSIE DG V Sbjct: 382 IVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVV 441 Query: 329 HEFVVGDRSHPEENEIRKVLQDIAERVRRVGHDPWTSVVLHDVGDEEKEGALCEHSERLA 150 HEFV+GD+SHPE +R+ +++++ RVR G+ P S VLH V DEEKE AL EHSER A Sbjct: 442 HEFVMGDQSHPEVKMLREFMEEMSMRVRDSGYRPSISDVLHKVVDEEKECALSEHSERFA 501 Query: 149 IAYGLLKTKAPVVIRVVKNLRVCPDCHEVTKIISKLYEREIIVRDRVRF 3 IAYGLLKT+AP+VIRVVKNLRVC DCHEV KIISKLYEREIIVRDRVRF Sbjct: 502 IAYGLLKTRAPIVIRVVKNLRVCVDCHEVIKIISKLYEREIIVRDRVRF 550 >tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays] Length = 648 Score = 317 bits (813), Expect = 1e-84 Identities = 152/230 (66%), Positives = 186/230 (80%) Frame = -1 Query: 692 RDYGIQPTMKHYGCMVDLLCRAGLVEEAYGFVETMHISPNSIVWRTLLMGCKKKGMLEKG 513 ++ GI+P+M++YGCMVDLLCR+GL+++AY FV M +SPNS++WRTLL+ CK ++ Sbjct: 405 QNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIA 464 Query: 512 EIVARRLLELEPLNAENYVLLSNLYAANSLWEKVSCVRMKMKEIGIKTLPGCSSIETDGF 333 E +RLLELEP N ENYVLLSNLYA+NS W++VS +R KMK + + G SSIE +G Sbjct: 465 ESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGH 524 Query: 332 VHEFVVGDRSHPEENEIRKVLQDIAERVRRVGHDPWTSVVLHDVGDEEKEGALCEHSERL 153 +HEFVV D SHPE EIR VL+++A+RVRR GH PWT+ VLHDVG+EEKE ALC+HSERL Sbjct: 525 LHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPWTAAVLHDVGEEEKEAALCQHSERL 584 Query: 152 AIAYGLLKTKAPVVIRVVKNLRVCPDCHEVTKIISKLYEREIIVRDRVRF 3 AIAYGLLKT+AP VIRVVKNLR C DCHEV KIISK Y REI+VRDRVRF Sbjct: 585 AIAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKIISKAYNREIVVRDRVRF 634 >ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays] gi|223948835|gb|ACN28501.1| unknown [Zea mays] Length = 599 Score = 317 bits (813), Expect = 1e-84 Identities = 152/230 (66%), Positives = 186/230 (80%) Frame = -1 Query: 692 RDYGIQPTMKHYGCMVDLLCRAGLVEEAYGFVETMHISPNSIVWRTLLMGCKKKGMLEKG 513 ++ GI+P+M++YGCMVDLLCR+GL+++AY FV M +SPNS++WRTLL+ CK ++ Sbjct: 356 QNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIA 415 Query: 512 EIVARRLLELEPLNAENYVLLSNLYAANSLWEKVSCVRMKMKEIGIKTLPGCSSIETDGF 333 E +RLLELEP N ENYVLLSNLYA+NS W++VS +R KMK + + G SSIE +G Sbjct: 416 ESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGH 475 Query: 332 VHEFVVGDRSHPEENEIRKVLQDIAERVRRVGHDPWTSVVLHDVGDEEKEGALCEHSERL 153 +HEFVV D SHPE EIR VL+++A+RVRR GH PWT+ VLHDVG+EEKE ALC+HSERL Sbjct: 476 LHEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPWTAAVLHDVGEEEKEAALCQHSERL 535 Query: 152 AIAYGLLKTKAPVVIRVVKNLRVCPDCHEVTKIISKLYEREIIVRDRVRF 3 AIAYGLLKT+AP VIRVVKNLR C DCHEV KIISK Y REI+VRDRVRF Sbjct: 536 AIAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKIISKAYNREIVVRDRVRF 585