BLASTX nr result

ID: Coptis24_contig00020651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020651
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326362.1| predicted protein [Populus trichocarpa] gi|2...   365   8e-99
ref|XP_002519514.1| translin, putative [Ricinus communis] gi|223...   358   1e-96
ref|XP_003554384.1| PREDICTED: translin-like [Glycine max]            357   3e-96
ref|XP_002281908.2| PREDICTED: translin [Vitis vinifera]              357   4e-96
ref|XP_003625667.1| Translin-like protein [Medicago truncatula] ...   353   4e-95

>ref|XP_002326362.1| predicted protein [Populus trichocarpa] gi|222833555|gb|EEE72032.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  365 bits (938), Expect = 8e-99
 Identities = 172/229 (75%), Positives = 202/229 (88%)
 Frame = +3

Query: 138 SSSPRPFVEKQFEKLRTQLEQSRNLRDRIQSVTNEIESTLRVMQSGLLLVHQSRPIPEVL 317
           + SP P ++KQFE+LR++LE+S  LR++I++V  EIEST R++ SGLLLVHQSRP+PEVL
Sbjct: 5   ADSPSPSLDKQFEELRSKLEESGRLREKIRAVVLEIESTTRLLHSGLLLVHQSRPVPEVL 64

Query: 318 EKGKVQIDVLKELYGRLAEILKDCPGQYYRYHGDWRSETQTGVSLIAFLHWIETGDLLTH 497
           EK K +I VLK LY RLAEI+ +CPGQYYRYHGDWRSETQ  VSL+  +HW+ETG+LL H
Sbjct: 65  EKAKARIGVLKGLYNRLAEIILECPGQYYRYHGDWRSETQIVVSLLTLMHWLETGNLLMH 124

Query: 498 TEAEEKLGLGSSEFNLDVEDYLVGICFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHA 677
           TEA+EKLGL S EF LD+EDYL+G+CFMSNE+PRYVVNQVTAGDYDCPRKVLKF+TDLHA
Sbjct: 125 TEAQEKLGLNSLEFGLDIEDYLIGVCFMSNEMPRYVVNQVTAGDYDCPRKVLKFMTDLHA 184

Query: 678 AFRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLTTNDNSTGDKG 824
           AFRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLT   +S G++G
Sbjct: 185 AFRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLTATGDSNGNQG 233


>ref|XP_002519514.1| translin, putative [Ricinus communis] gi|223541377|gb|EEF42928.1|
           translin, putative [Ricinus communis]
          Length = 299

 Score =  358 bits (920), Expect = 1e-96
 Identities = 187/296 (63%), Positives = 230/296 (77%), Gaps = 24/296 (8%)
 Frame = +3

Query: 6   MKSASLFRNTF-LSLSHSLNPILKPLISLHSFQNYRKPHH---------------FTTMS 137
           MKSA  FRN + LSL  SLNP +   ISL +  +  +P                 F++++
Sbjct: 1   MKSA--FRNAYILSLYRSLNPNILASISLTTLPSSARPLSALQNAPFRSLCSTICFSSLT 58

Query: 138 --------SSSPRPFVEKQFEKLRTQLEQSRNLRDRIQSVTNEIESTLRVMQSGLLLVHQ 293
                   SSSP P +E QF++ RT LE+S ++R++I+SV +EIES+ R +   LLLVHQ
Sbjct: 59  MAATGDRNSSSP-PTLENQFKEFRTHLEESGSVREKIRSVVSEIESSSRCIHVSLLLVHQ 117

Query: 294 SRPIPEVLEKGKVQIDVLKELYGRLAEILKDCPGQYYRYHGDWRSETQTGVSLIAFLHWI 473
           SRP+ E+LE+ K QI+VLK+LY +LA+I+KD PGQ+YRYHGDW+SETQT VSL+AF+HW+
Sbjct: 118 SRPVSEILEEAKAQIEVLKKLYSQLADIIKDRPGQFYRYHGDWKSETQTVVSLLAFMHWL 177

Query: 474 ETGDLLTHTEAEEKLGLGSSEFNLDVEDYLVGICFMSNELPRYVVNQVTAGDYDCPRKVL 653
           ETG+LL H+EAEEKLGL SSEF LD+EDYL+GICFMSNE+PRYVVN+VTAGDYDCPRKVL
Sbjct: 178 ETGNLLLHSEAEEKLGLNSSEFGLDIEDYLIGICFMSNEMPRYVVNRVTAGDYDCPRKVL 237

Query: 654 KFLTDLHAAFRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLTTNDNSTGDK 821
           KFLTDLHAAFRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGL +N +   D+
Sbjct: 238 KFLTDLHAAFRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLASNGDLVADQ 293


>ref|XP_003554384.1| PREDICTED: translin-like [Glycine max]
          Length = 295

 Score =  357 bits (916), Expect = 3e-96
 Identities = 184/279 (65%), Positives = 220/279 (78%), Gaps = 9/279 (3%)
 Frame = +3

Query: 9   KSASLFRNTFLSLSHSLNPILKPLISLHSFQNYRKPHHF------TTMSSSS---PRPFV 161
           ++A+ + + F S S +LNP   PL+ +  F   RKP  F      + +SSSS   P   +
Sbjct: 9   RNAAFYCHVF-SRSLTLNP--NPLLLVSPF---RKPETFRLASPVSCLSSSSMAVPPSSL 62

Query: 162 EKQFEKLRTQLEQSRNLRDRIQSVTNEIESTLRVMQSGLLLVHQSRPIPEVLEKGKVQID 341
           EKQF+  R QLE+S  LR+RI+SV +EIES+ R++ + LLLVHQSRP PE+LEK K  ++
Sbjct: 63  EKQFDDFRVQLEESGTLRERIRSVVSEIESSTRLIYATLLLVHQSRPTPELLEKAKSHVN 122

Query: 342 VLKELYGRLAEILKDCPGQYYRYHGDWRSETQTGVSLIAFLHWIETGDLLTHTEAEEKLG 521
           VLK+ Y +LAE++  CPGQYYRYHGDW+SETQ+ VS++ F+HW+ETG LL H EAEEKLG
Sbjct: 123 VLKKQYKQLAEVVGGCPGQYYRYHGDWKSETQSVVSMLTFMHWLETGSLLEHKEAEEKLG 182

Query: 522 LGSSEFNLDVEDYLVGICFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAAFRMLNLR 701
           L SSEF LDVEDYL+G+CFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAAFRMLNLR
Sbjct: 183 LNSSEFGLDVEDYLIGVCFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAAFRMLNLR 242

Query: 702 NDFLRKKFDGMKYDLRRVEEVYYDVKIRGLTTNDNSTGD 818
           NDFLRKKFDGMKYDLR+VEEVYYDVKIRGLT N    GD
Sbjct: 243 NDFLRKKFDGMKYDLRKVEEVYYDVKIRGLTPNGEPVGD 281


>ref|XP_002281908.2| PREDICTED: translin [Vitis vinifera]
          Length = 312

 Score =  357 bits (915), Expect = 4e-96
 Identities = 177/278 (63%), Positives = 211/278 (75%), Gaps = 20/278 (7%)
 Frame = +3

Query: 18  SLFRNTFLSLSHSLNP-----ILKPLISLHS---------------FQNYRKPHHFTTMS 137
           ++FRN F ++S SLNP     I  P +   S               F+      H ++M+
Sbjct: 3   AVFRNVFSAVSRSLNPNPHSSIFLPTLRTFSSIILPPSPFPFRNNAFRLLSATSHSSSMA 62

Query: 138 SSSPRPFVEKQFEKLRTQLEQSRNLRDRIQSVTNEIESTLRVMQSGLLLVHQSRPIPEVL 317
                  VEKQFE  R QLE+S  LR+R++++  EIES  R+M + LLLVHQSR +PEVL
Sbjct: 63  EDGTSSSVEKQFESFRCQLEESGGLRERVRAIAMEIESATRLMHANLLLVHQSRSVPEVL 122

Query: 318 EKGKVQIDVLKELYGRLAEILKDCPGQYYRYHGDWRSETQTGVSLIAFLHWIETGDLLTH 497
           EK   QI VLK+LY +L  +L++CPGQYYRYHG+WRSETQT VSL+ F+HW+ETG+LL H
Sbjct: 123 EKASSQIAVLKKLYNQLGVVLQECPGQYYRYHGEWRSETQTAVSLLTFMHWLETGNLLMH 182

Query: 498 TEAEEKLGLGSSEFNLDVEDYLVGICFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHA 677
           TEAE+KLGL +S+F LD+EDYL+G+CFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHA
Sbjct: 183 TEAEQKLGLNASDFGLDIEDYLIGVCFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHA 242

Query: 678 AFRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGL 791
           AFRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGL
Sbjct: 243 AFRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGL 280


>ref|XP_003625667.1| Translin-like protein [Medicago truncatula]
           gi|355500682|gb|AES81885.1| Translin-like protein
           [Medicago truncatula]
          Length = 237

 Score =  353 bits (906), Expect = 4e-95
 Identities = 171/233 (73%), Positives = 195/233 (83%)
 Frame = +3

Query: 138 SSSPRPFVEKQFEKLRTQLEQSRNLRDRIQSVTNEIESTLRVMQSGLLLVHQSRPIPEVL 317
           SS+P P +EKQF + RT LEQS  LRDRI++V +EIEST R+M + +LLVH SRP PE+L
Sbjct: 4   SSAPDPSLEKQFGEFRTHLEQSGTLRDRIRTVVSEIESTTRLMYASILLVHHSRPTPELL 63

Query: 318 EKGKVQIDVLKELYGRLAEILKDCPGQYYRYHGDWRSETQTGVSLIAFLHWIETGDLLTH 497
           EK K QIDVLKE Y +LA+IL   PGQYYRYHGDW+SETQT VS++ F+HW+ETG LL H
Sbjct: 64  EKAKSQIDVLKEKYKQLADILGGYPGQYYRYHGDWKSETQTVVSMLTFVHWLETGKLLEH 123

Query: 498 TEAEEKLGLGSSEFNLDVEDYLVGICFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHA 677
            EAEE LGL   EFNLDVEDYLVG+CFMSNELPRYVVNQVTAGDYDCPR VLKFLT+LHA
Sbjct: 124 KEAEEMLGLNGPEFNLDVEDYLVGVCFMSNELPRYVVNQVTAGDYDCPRNVLKFLTELHA 183

Query: 678 AFRMLNLRNDFLRKKFDGMKYDLRRVEEVYYDVKIRGLTTNDNSTGDKGTQAE 836
           AFRMLNLRND LR+KFDGMKYDLR+VEEVYYDVKIRGLT N  S  D+G + +
Sbjct: 184 AFRMLNLRNDLLRRKFDGMKYDLRKVEEVYYDVKIRGLTPNGESVADQGIKGQ 236


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