BLASTX nr result

ID: Coptis24_contig00020643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020643
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argo...   114   6e-24
emb|CBI17106.3| unnamed protein product [Vitis vinifera]              114   6e-24
gb|AFW67327.1| putative argonaute superfamily protein [Zea mays]      108   3e-22
ref|XP_002463728.1| hypothetical protein SORBIDRAFT_01g004920 [S...   107   1e-21
ref|XP_004167325.1| PREDICTED: LOW QUALITY PROTEIN: protein argo...   105   5e-21

>ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Vitis
           vinifera]
          Length = 1038

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/80 (65%), Positives = 63/80 (78%)
 Frame = +3

Query: 3   LTHRKEEKRNKITGITTQPIEQLMFTVDEGGRRMSVAQYFHDKYDVKLRYGHWPALQAGS 182
           LTHR+  KR KI G+++QP  QLMFT+D+   R+SV QYF  KY++ L+Y  WP+LQAGS
Sbjct: 424 LTHREFAKRYKIAGVSSQPTNQLMFTLDDEATRVSVVQYFRQKYNIVLKYPSWPSLQAGS 483

Query: 183 DSKPAYFPMEVCKIVEGQRY 242
           DSKP Y PMEVCKIVEGQRY
Sbjct: 484 DSKPIYLPMEVCKIVEGQRY 503


>emb|CBI17106.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/80 (65%), Positives = 63/80 (78%)
 Frame = +3

Query: 3   LTHRKEEKRNKITGITTQPIEQLMFTVDEGGRRMSVAQYFHDKYDVKLRYGHWPALQAGS 182
           LTHR+  KR KI G+++QP  QLMFT+D+   R+SV QYF  KY++ L+Y  WP+LQAGS
Sbjct: 418 LTHREFAKRYKIAGVSSQPTNQLMFTLDDEATRVSVVQYFRQKYNIVLKYPSWPSLQAGS 477

Query: 183 DSKPAYFPMEVCKIVEGQRY 242
           DSKP Y PMEVCKIVEGQRY
Sbjct: 478 DSKPIYLPMEVCKIVEGQRY 497


>gb|AFW67327.1| putative argonaute superfamily protein [Zea mays]
          Length = 941

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/80 (63%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
 Frame = +3

Query: 6   THRKEE-KRNKITGITTQPIEQLMFTVDEGGRRMSVAQYFHDKYDVKLRYGHWPALQAGS 182
           TH++++ +R KITGIT  P+ QL+F VD+ G R +V QYF DKYD +L+Y  WP LQAGS
Sbjct: 412 THQQDQIRRYKITGITPIPMSQLIFPVDDKGTRKTVVQYFLDKYDYRLKYVSWPCLQAGS 471

Query: 183 DSKPAYFPMEVCKIVEGQRY 242
           DS+P Y PMEVCKIVEGQRY
Sbjct: 472 DSRPVYLPMEVCKIVEGQRY 491


>ref|XP_002463728.1| hypothetical protein SORBIDRAFT_01g004920 [Sorghum bicolor]
           gi|241917582|gb|EER90726.1| hypothetical protein
           SORBIDRAFT_01g004920 [Sorghum bicolor]
          Length = 1067

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/80 (60%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
 Frame = +3

Query: 6   THRKEE-KRNKITGITTQPIEQLMFTVDEGGRRMSVAQYFHDKYDVKLRYGHWPALQAGS 182
           TH++++ +R KITG+T+ P+ QL+F VD+ G R +V QYF DKY+  L++G WP LQAGS
Sbjct: 451 THQQDQIRRYKITGVTSIPMSQLIFPVDDKGTRKTVVQYFWDKYNYSLKHGSWPCLQAGS 510

Query: 183 DSKPAYFPMEVCKIVEGQRY 242
           DS+P Y PMEVCKI+EGQRY
Sbjct: 511 DSRPVYLPMEVCKILEGQRY 530


>ref|XP_004167325.1| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Cucumis
           sativus]
          Length = 984

 Score =  105 bits (261), Expect = 5e-21
 Identities = 48/80 (60%), Positives = 63/80 (78%)
 Frame = +3

Query: 3   LTHRKEEKRNKITGITTQPIEQLMFTVDEGGRRMSVAQYFHDKYDVKLRYGHWPALQAGS 182
           LT R+  +  KITGI+++P+ +LMFT+D+   R+SVAQYFH+KY V L+Y   PA+QAG+
Sbjct: 380 LTCREHARTYKITGISSEPVNRLMFTLDDQKTRISVAQYFHEKYGVALKYPFLPAIQAGN 439

Query: 183 DSKPAYFPMEVCKIVEGQRY 242
           D+KP Y PMEVCKIV GQRY
Sbjct: 440 DAKPVYLPMEVCKIVAGQRY 459


Top