BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020642
         (1974 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...   232   3e-58
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   225   4e-56
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ...   208   4e-51
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...   207   1e-50
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   205   3e-50

>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score =  232 bits (591), Expect = 3e-58
 Identities = 132/438 (30%), Positives = 213/438 (48%), Gaps = 2/438 (0%)
 Frame = -1

Query: 1314 AWNCRGMGSHSAIQSLTDLIRVSQPDVICLAETMVQEKKMEMVRKRIKFGGQCIVPAVGK 1135
            AWNCRG+G+ + +Q L  LI+ +   ++ L ET    +KM  +R+++ F G   V + GK
Sbjct: 640  AWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVSSEGK 699

Query: 1134 KGGLAIFWKDGVQLDILGATSNHITVKITAYPSHCDWFFSFVYGEPVSSRRKRVWDELRD 955
             GGLA++W + V +D+      +I   +   P    W  +FVYGEP    R R+W  LR 
Sbjct: 700  SGGLALYWDESVSVDVKDINKRYIDAYVRLSPDEPQWHITFVYGEPRVENRHRMWSLLRT 759

Query: 954  MATLIPGPWLLFGDFNAISSPTEKIGGNGHLSRSMIEFNDMISDLGLIDLGYRGSNYTWS 775
            +      PW++ GDFN      E    N      M  F D + D  L DLG++G  +T+ 
Sbjct: 760  IRQSSALPWMVIGDFNETLWQFEHFSKNPRCETQMQNFRDALYDCDLQDLGFKGVPHTYD 819

Query: 774  NHRLFGDHILERLDRALVNADWFELFPHASVQNIPITSSDH--LYLSINLTGTTTNSKKP 601
            N R    ++  RLDRA+ +  W +LFP A V ++    SDH  + L   +  TT   +K 
Sbjct: 820  NRRDGWRNVKVRLDRAVADDKWRDLFPEAQVSHLVSPCSDHSPILLEFIVKDTTRPRQKC 879

Query: 600  FRFFDMWTMDPTCKATIDLAWKEKSVGSPALNVHYKMKNTSTKLQKWNVEVFGIITQQIK 421
              +  +W  +P     I+ AW    V +   +++  +    + L+ W+      + ++++
Sbjct: 880  LHYEIVWEREPESVQVIEEAWINAGVKTDLGDINIALGRVMSALRSWSKTKVKNVGKELE 939

Query: 420  KVRKELELVCSGNMNDAANYYXXXXXXXXXXXXXXXXESFWQQKAGFNWIKEGGRNTRFF 241
            K RK+LE + + N    A                   E  W Q++  NW+KEG RNTRFF
Sbjct: 940  KARKKLEDLIASN----AARSSIRQATDHMNEMLYREEMLWLQRSRVNWLKEGDRNTRFF 995

Query: 240  HLSTVYRRRKNKIERLKDDAGIWHTDEKAVGANVNDYFRTIFTSDKPLPNVDLLNLFKPC 61
            H   V+R +KNKI +L+D+ G  H+    +     +YF+ ++ +D  L    +  LF+  
Sbjct: 996  HSRAVWRAKKNKISKLRDENGAIHSTTSVLETMATEYFQGVYKADPSLNPESVTRLFQEK 1055

Query: 60   ITPHENLNLTEAPTDAEI 7
            +T   N  L +   + EI
Sbjct: 1056 VTDAMNEKLCQEFKEEEI 1073


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  225 bits (573), Expect = 4e-56
 Identities = 127/431 (29%), Positives = 216/431 (50%), Gaps = 9/431 (2%)
 Frame = -1

Query: 1320 ITAWNCRGMGSHSAIQSLTDLIRVSQPDVICLAETMVQEKKMEMVRKRIKFGGQCIVPAV 1141
            I +WNCRGMGS SA+ +L  L+    P ++ L+ET ++  +ME V+K++K+     V   
Sbjct: 4    ILSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCE 63

Query: 1140 G----KKGGLAIFWKDGVQLDILGATSNHITVKITAYPSHCDWFFSFVYGEPVSSRRKRV 973
            G    ++GGLA+ W+  +++ ++  +SNHI + +    +  +W F+ +YG P    + + 
Sbjct: 64   GECRKRRGGLAMLWRSEIKVQVMSMSSNHIDI-VVGEEAQGEWRFTGIYGYPEEEHKDKT 122

Query: 972  WDELRDMATLIPGPWLLFGDFNAISSPTEKIGGNGHLSRSMIEFNDMISDLGLIDLGYRG 793
               L  +A     PWL  GDFN +   +EK GG+G  SR    F + + +   +DLG+ G
Sbjct: 123  GALLSALARASRRPWLCGGDFNLMLVASEKKGGDGFNSREADIFRNAMEECHFMDLGFVG 182

Query: 792  SNYTWSNHRLFGDHILERLDRALVNADWFELFPHASVQNIPITSSDHLYLSINLTG---- 625
              +TW+N+R    +I ERLDR + N  W   FP + V ++P   SDH+ +  ++ G    
Sbjct: 183  YEFTWTNNRGGDANIQERLDRFVANDLWKIKFPGSFVSHLPKRKSDHVPIVASVKGAQSA 242

Query: 624  -TTTNSKKPFRFFDMWTMDPTCKATIDLAWKEKSVGSPALNVHYKMKNTSTKLQKWNVEV 448
             T T   K FRF  MW  +      +   W          +    +  T+ KL  W+ + 
Sbjct: 243  ATRTKKSKRFRFEAMWLREGESDEVVKETWMR------GTDAGINLARTANKLLSWSKQK 296

Query: 447  FGIITQQIKKVRKELELVCSGNMNDAANYYXXXXXXXXXXXXXXXXESFWQQKAGFNWIK 268
            FG + ++I+  + +++++     ++  N                  E +W Q++  +WIK
Sbjct: 297  FGHVAKEIRMCQHQMKVLMESEPSE-DNIMHMRALDARMDELEKREEVYWHQRSRQDWIK 355

Query: 267  EGGRNTRFFHLSTVYRRRKNKIERLKDDAGIWHTDEKAVGANVNDYFRTIFTSDKPLPNV 88
             G +NT+FFH    +R ++N + R++++AG W  DE  V      YF  +F S       
Sbjct: 356  SGDKNTKFFHQKASHREQRNNVRRIRNEAGEWFEDEDDVTECFAHYFENLFQSGNNCEMD 415

Query: 87   DLLNLFKPCIT 55
             +LN+ KP IT
Sbjct: 416  PILNIVKPQIT 426


>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score =  208 bits (530), Expect = 4e-51
 Identities = 130/416 (31%), Positives = 211/416 (50%), Gaps = 1/416 (0%)
 Frame = -1

Query: 1251 VSQPDVICLAETMVQEKKMEMVRKRIKFGGQCIVPAVGKKGGLAIFWKDGVQLDILGATS 1072
            + +P ++ LAET    +   MV+ RI       V  VGK GGLA+FW + + + +    S
Sbjct: 9    IHRPKIVFLAET---RQDQYMVQNRIGLRRCFTVNGVGKGGGLALFWDESMNVVLKSYNS 65

Query: 1071 NHITVKITAYPSHCDWFFSFVYGEPVSSRRKRVWDELRDMATLIPGPWLLFGDFNAISSP 892
             HI V IT     C W  +FVYGEP +  R  +W  LR + +    PWL+ GDFN     
Sbjct: 66   RHIDVLITELDC-CTWRATFVYGEPRAQDRHLMWSLLRRIRSNSGDPWLMIGDFNEAMWQ 124

Query: 891  TEKIGGNGHLSRSMIEFNDMISDLGLIDLGYRGSNYTWSNHRLFGDHILERLDRALVNAD 712
            TE           M +F +++S+  L D+G++G+ +T+ N +  G ++  RLDR + +  
Sbjct: 125  TEHKSHRKRSESQMRDFREVLSECDLHDIGFQGAPWTFCNMQREGRNVKVRLDRGVASPA 184

Query: 711  WFELFPHASVQNIPITSSDHLYLSINLTGTT-TNSKKPFRFFDMWTMDPTCKATIDLAWK 535
            W   FP A + ++   SSDH  L +    TT     K  R+ ++W  + +    I  AW 
Sbjct: 185  WSSRFPQAVITHLTTPSSDHAPLLLEREETTLARPMKIMRYEEVWERESSLPEVIQEAWT 244

Query: 534  EKSVGSPALNVHYKMKNTSTKLQKWNVEVFGIITQQIKKVRKELELVCSGNMNDAANYYX 355
              +  S   +++ KMK T TKL  W+ +  G + ++IK +R++L  + +  + D  N   
Sbjct: 245  MGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDLREKLGELRNIGLLDTDN--E 302

Query: 354  XXXXXXXXXXXXXXXESFWQQKAGFNWIKEGGRNTRFFHLSTVYRRRKNKIERLKDDAGI 175
                           E +W+Q++   W+KEG  NTR+FHL   +R +KNKI++LK + G 
Sbjct: 303  VHSVKKELEEMLHREEIWWKQRSRITWLKEGDLNTRYFHLKASWRAKKNKIKKLKKNDGS 362

Query: 174  WHTDEKAVGANVNDYFRTIFTSDKPLPNVDLLNLFKPCITPHENLNLTEAPTDAEI 7
               ++K +      +F+ ++T D  L  V+LLN+F   I+   N +L +  T+ EI
Sbjct: 363  TTMNKKEMKEINRSFFQQLYTKDDNLNPVNLLNMFHEKISEQMNADLIKPFTNEEI 418


>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score =  207 bits (526), Expect = 1e-50
 Identities = 123/426 (28%), Positives = 214/426 (50%), Gaps = 2/426 (0%)
 Frame = -1

Query: 1278 IQSLTDLIRVSQPDVICLAETMVQEKKMEMVRKRIKFGGQCIVPAVGKKGGLAIFWKDGV 1099
            +Q L  +++     ++ L+ET   +  +  ++ R+      +V  VGK GGLA+FW + +
Sbjct: 263  VQDLVCMVQTHSSKIVFLSETRQDQFYVSNLKWRLGLRRCFVVNGVGKGGGLALFWDESL 322

Query: 1098 QLDILGATSNHITVKITAYPSHCDWFFSFVYGEPVSSRRKRVWDELRDMATLIPGPWLLF 919
            ++++      HI V IT  P    W  +FVYGEP +  R  +W+ LR +      PWL+ 
Sbjct: 323  KVELKSYNMRHIDVIITE-PEGARWTATFVYGEPKAQNRHEMWNLLRRIRLNASDPWLMI 381

Query: 918  GDFNAISSPTEKIGGNGHLSRSMIEFNDMISDLGLIDLGYRGSNYTWSNHRLFGDHILER 739
            GDFN      E      H  R M +F +++ +  L D+G++G  +T+ N++   +++  R
Sbjct: 382  GDFNEAMWQIEHRSRVKHSERQMRDFREVLVECDLQDIGFQGVPWTYDNNQASPNNVKVR 441

Query: 738  LDRALVNADWFELFPHASVQNIPITSSDHLYLSINLTGTTTNSK--KPFRFFDMWTMDPT 565
            LDRA+ +  W  +F  A++ ++    SDH+ L +   G     +  K   F  +W    +
Sbjct: 442  LDRAVASPVWRAMFDQANIMHLTTACSDHVPLLLEKGGNMQQRRRSKINCFEAVWERVKS 501

Query: 564  CKATIDLAWKEKSVGSPALNVHYKMKNTSTKLQKWNVEVFGIITQQIKKVRKELELVCSG 385
              +    +W +  +     +V  K+  T   L++W+ +  G I + I++ R+ELE +   
Sbjct: 502  FNSIEHESWDDGGLAKNLGDVRTKLAYTMENLKRWSRDKIGNIKKSIERCRRELEEMRMR 561

Query: 384  NMNDAANYYXXXXXXXXXXXXXXXXESFWQQKAGFNWIKEGGRNTRFFHLSTVYRRRKNK 205
               D+                    E +W+Q++   W+KEG RNTR+FHL   +R RKN 
Sbjct: 562  GREDSEP--DVHRLKIFLQELLHREEIWWKQRSRITWLKEGDRNTRYFHLKASWRARKNL 619

Query: 204  IERLKDDAGIWHTDEKAVGANVNDYFRTIFTSDKPLPNVDLLNLFKPCITPHENLNLTEA 25
            I++L+   G+  + E+ +G     +FR ++T D+ L   +LLN+F+P IT   N  LT+ 
Sbjct: 620  IKKLRRSDGMMCSKEEELGEIARSFFRDLYTKDESLNPGELLNMFEPKITDEMNGMLTKP 679

Query: 24   PTDAEI 7
             TD EI
Sbjct: 680  FTDEEI 685


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  205 bits (522), Expect = 3e-50
 Identities = 126/443 (28%), Positives = 204/443 (46%), Gaps = 5/443 (1%)
 Frame = -1

Query: 1320 ITAWNCRGMGSHSAIQSLTDLIRVSQPDVICLAETMVQEKKMEMVRKRIKFGGQCIVPAV 1141
            + +WNC+G+ +   + +L  L    +P+++ + ETMV  + +E +RKR  F     + + 
Sbjct: 3    LLSWNCQGLANPWTVNALHSLCWRDRPNIVFVMETMVDSQVLEKIRKRCGFMNGLCLSSN 62

Query: 1140 GKKGGLAIFWKDGVQLDILGATSNHITVKITAYPSHCDWFFSFVYGEPVSSRRKRVWDEL 961
            G  GG+ ++W + + + +   +++HI   +     +  W    +YG P +S +   W  L
Sbjct: 63   GNSGGMGLWWNE-MDVTVESFSAHHIHAVVLDENKNPIWNAMGIYGWPETSNKHLTWSLL 121

Query: 960  RDMATLIPGPWLLFGDFNAISSPTEKIGGNGHLSRSMIEFNDMISDLGLIDLGYRGSNYT 781
            R +      P L FGDFN I+S  EK GG     R M  F ++I D  + DLGY G+ +T
Sbjct: 122  RRLKQQCSLPVLFFGDFNEITSIEEKEGGAPRCERVMDAFREVIDDCAVKDLGYVGNRFT 181

Query: 780  WSNHRLFGDHILERLDRALVNADWFELFPHASVQNIPITSSDH--LYLSINLTGTTTNSK 607
            W         I ERLDR L N +W + FP   V ++P   SDH  L L   +  +     
Sbjct: 182  WQRGNSPSTLIRERLDRMLANDEWCDNFPSWEVVHLPRYRSDHAPLLLKTGVNDSFRRGN 241

Query: 606  KPFRFFDMWTMDPTCKATIDLAWKEKSVGSPALNVHYKMKNTSTKLQKWNVEVFGIITQQ 427
            K F+F  MW     C   ++ AW     GS   ++  ++   S  L  W  + FG     
Sbjct: 242  KLFKFEAMWLSKEECGKIVEEAWN----GSAGEDITNRLDEVSRSLSTWATKTFG----N 293

Query: 426  IKKVRKELELVCSGNMN---DAANYYXXXXXXXXXXXXXXXXESFWQQKAGFNWIKEGGR 256
            +KK +KE   + +G      DA+                   ES+W  +A  N I++G +
Sbjct: 294  LKKRKKEALTLLNGLQQRDPDASTLEQCRIVSGDLDEIHRLEESYWHARARANEIRDGDK 353

Query: 255  NTRFFHLSTVYRRRKNKIERLKDDAGIWHTDEKAVGANVNDYFRTIFTSDKPLPNVDLLN 76
            NT++FH     R+R+N I  L D+ G+W    + +   V  YF  +F +D P+     L 
Sbjct: 354  NTKYFHHKASQRKRRNTINELLDENGVWKKGREEICGVVQHYFEGLFATDSPVNMELALE 413

Query: 75   LFKPCITPHENLNLTEAPTDAEI 7
                C++   N  L   P+  E+
Sbjct: 414  GLSHCVSTDMNTALLMLPSGDEV 436