BLASTX nr result

ID: Coptis24_contig00020641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020641
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301199.1| predicted protein [Populus trichocarpa] gi|2...   267   3e-69
ref|XP_002510272.1| conserved hypothetical protein [Ricinus comm...   265   1e-68
ref|XP_002284248.1| PREDICTED: uncharacterized protein LOC100245...   255   2e-65
ref|XP_002327108.1| predicted protein [Populus trichocarpa] gi|2...   248   1e-63
ref|NP_001241228.1| uncharacterized protein LOC100782262 [Glycin...   244   2e-62

>ref|XP_002301199.1| predicted protein [Populus trichocarpa] gi|222842925|gb|EEE80472.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  267 bits (683), Expect = 3e-69
 Identities = 141/222 (63%), Positives = 164/222 (73%), Gaps = 2/222 (0%)
 Frame = -1

Query: 937 MENPALMSLLRHANGEKRSKTGT--ILRMFKLFPLLSSGCKMVALLGRPXXXXXXXXXXX 764
           M+N A++SL RH  GEKRSK+ +  +L+MFKLFP+L+SGCKMVALLGRP           
Sbjct: 12  MDNQAILSLHRHTAGEKRSKSSSSGLLKMFKLFPMLTSGCKMVALLGRPRKALLKDNATT 71

Query: 763 XXXXXXGYRRGKLNLTIQEDPKSIPSFVIELPIHAITFHKEMTSGLVRIAXXXXXXXXXX 584
                  YR+G+++L IQEDP  +P FVIELP+H+  FHKEM S +VRIA          
Sbjct: 72  GTIFG--YRKGRVSLAIQEDPHCVPRFVIELPMHSSLFHKEMASDIVRIALESETKTHKK 129

Query: 583 XXXXEYVWAVYCNGHKSGYSIRRKQTSEDELHVMQLLRGVSMGAGVLPCPSDGQKESMDG 404
               E+VWAVYCNG K GYSIRRKQ S+DELHVMQLLRGVSMGAGVLPCP++  KES DG
Sbjct: 130 KLLEEFVWAVYCNGRKVGYSIRRKQMSDDELHVMQLLRGVSMGAGVLPCPNN-VKESADG 188

Query: 403 ELTYIRGRFERVVGSKDSEAFYMINPDRTSGPELSIFFVRGQ 278
           ELTYIR RFERVVGSKDSEA YMINPD  +GPELSIFFVR +
Sbjct: 189 ELTYIRARFERVVGSKDSEALYMINPDGAAGPELSIFFVRAR 230


>ref|XP_002510272.1| conserved hypothetical protein [Ricinus communis]
           gi|223550973|gb|EEF52459.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 229

 Score =  265 bits (678), Expect = 1e-68
 Identities = 141/220 (64%), Positives = 161/220 (73%), Gaps = 2/220 (0%)
 Frame = -1

Query: 937 MENPALMSLLRHANGEKRSKT--GTILRMFKLFPLLSSGCKMVALLGRPXXXXXXXXXXX 764
           M+NPA+MSLLR    EKRSK+  G +L+MFKLFP+L+SGCKMVALLGRP           
Sbjct: 12  MDNPAIMSLLRQTAAEKRSKSSSGGLLKMFKLFPMLTSGCKMVALLGRPRKPMLKDSATT 71

Query: 763 XXXXXXGYRRGKLNLTIQEDPKSIPSFVIELPIHAITFHKEMTSGLVRIAXXXXXXXXXX 584
                  YR+G+++L IQEDP  +P FVIELPIH   FHKEM S +VRIA          
Sbjct: 72  GTLFG--YRKGRVSLAIQEDPHCVPMFVIELPIHTSAFHKEMASDIVRIALESETKTHKK 129

Query: 583 XXXXEYVWAVYCNGHKSGYSIRRKQTSEDELHVMQLLRGVSMGAGVLPCPSDGQKESMDG 404
               E+VWAVYCNG K GYSIRRKQ S+DELHVMQLLRGVSMGAGVLP P+  +KE+ DG
Sbjct: 130 KVMEEFVWAVYCNGRKIGYSIRRKQMSDDELHVMQLLRGVSMGAGVLPSPN--EKETADG 187

Query: 403 ELTYIRGRFERVVGSKDSEAFYMINPDRTSGPELSIFFVR 284
           ELTYIR RF+RVVGSKDSEA YMINPD  +GPELSIFFVR
Sbjct: 188 ELTYIRARFDRVVGSKDSEALYMINPDGAAGPELSIFFVR 227


>ref|XP_002284248.1| PREDICTED: uncharacterized protein LOC100245545 [Vitis vinifera]
          Length = 228

 Score =  255 bits (651), Expect = 2e-65
 Identities = 136/219 (62%), Positives = 157/219 (71%), Gaps = 1/219 (0%)
 Frame = -1

Query: 937 MENPALMSLLRHANGEKRSKT-GTILRMFKLFPLLSSGCKMVALLGRPXXXXXXXXXXXX 761
           MENPAL+SLLR  + EKRSK+ G   RMFKLFPLL+SGCKMVALLGRP            
Sbjct: 12  MENPALLSLLRPTSNEKRSKSSGGFFRMFKLFPLLTSGCKMVALLGRPRRPQIGDSATTG 71

Query: 760 XXXXXGYRRGKLNLTIQEDPKSIPSFVIELPIHAITFHKEMTSGLVRIAXXXXXXXXXXX 581
                 YR+G+++L IQ+DP  +P F+IELP+     HKEM S ++RIA           
Sbjct: 72  TIFG--YRKGRVSLAIQDDPHCVPMFIIELPMLTSLLHKEMASDIIRIALESETKTHKKK 129

Query: 580 XXXEYVWAVYCNGHKSGYSIRRKQTSEDELHVMQLLRGVSMGAGVLPCPSDGQKESMDGE 401
              E+VWAVYCNG K GYSIRRKQ S++ELHVMQLLRGVSMGAGVLPC SD  K++ DGE
Sbjct: 130 LMEEFVWAVYCNGRKIGYSIRRKQMSDEELHVMQLLRGVSMGAGVLPCQSD--KDTADGE 187

Query: 400 LTYIRGRFERVVGSKDSEAFYMINPDRTSGPELSIFFVR 284
           LTY+R RFERVVGSKDSEA +MINPD   GPELSIFFVR
Sbjct: 188 LTYMRARFERVVGSKDSEALHMINPDGAGGPELSIFFVR 226


>ref|XP_002327108.1| predicted protein [Populus trichocarpa] gi|222835423|gb|EEE73858.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  248 bits (634), Expect = 1e-63
 Identities = 132/205 (64%), Positives = 150/205 (73%), Gaps = 2/205 (0%)
 Frame = -1

Query: 892 EKRSKT--GTILRMFKLFPLLSSGCKMVALLGRPXXXXXXXXXXXXXXXXXGYRRGKLNL 719
           EKRSK+  G +L+MFKLFP+L+SGCKMVALLGRP                  YR+G+++L
Sbjct: 1   EKRSKSSSGGLLKMFKLFPMLTSGCKMVALLGRPRKPLLKDHATTGTIFG--YRKGRVSL 58

Query: 718 TIQEDPKSIPSFVIELPIHAITFHKEMTSGLVRIAXXXXXXXXXXXXXXEYVWAVYCNGH 539
            IQEDP   P FVIELP+H+  FHKEM S +VRIA              E+VWAVYCNG 
Sbjct: 59  AIQEDPHCAPMFVIELPMHSSLFHKEMASDIVRIALESETKTHKKKLLEEFVWAVYCNGR 118

Query: 538 KSGYSIRRKQTSEDELHVMQLLRGVSMGAGVLPCPSDGQKESMDGELTYIRGRFERVVGS 359
           K GY IRRKQ S+DELHVMQLLRGVSMGAGVLPCP++ +KES DGELTYIR RFERVVGS
Sbjct: 119 KVGYCIRRKQMSDDELHVMQLLRGVSMGAGVLPCPNN-EKESADGELTYIRARFERVVGS 177

Query: 358 KDSEAFYMINPDRTSGPELSIFFVR 284
           KDSEA YMINPD  +GPELSIFF R
Sbjct: 178 KDSEALYMINPDGAAGPELSIFFAR 202


>ref|NP_001241228.1| uncharacterized protein LOC100782262 [Glycine max]
           gi|255636523|gb|ACU18600.1| unknown [Glycine max]
          Length = 232

 Score =  244 bits (624), Expect = 2e-62
 Identities = 138/227 (60%), Positives = 156/227 (68%), Gaps = 6/227 (2%)
 Frame = -1

Query: 946 GKLMENPALMSLLRHANGE-----KRSKTGTILRMFKLFPLLSSGCKMVALLGRPXXXXX 782
           G  MENPAL SLLRH  GE     K S  G +L+M KLFP+LSSGCKMVALLGRP     
Sbjct: 9   GYSMENPALASLLRHTTGENKRSNKLSSGGGLLKMLKLFPMLSSGCKMVALLGRPRKMLK 68

Query: 781 XXXXXXXXXXXXGYRRGKLNLTIQEDPKSIPSFVIELPIHAITFHKEMTSGLVRIAXXXX 602
                        YR+G+++L IQED + +P F+IELP+ A   +KEM S +VRIA    
Sbjct: 69  DSATTGTIFG---YRKGRVSLAIQEDTRQMPVFLIELPMLASALNKEMASDIVRIALESE 125

Query: 601 XXXXXXXXXXEYVWAVYCNGHKSGYSIRRKQTSEDELHVMQLLRGVSMGAGVLPCPSDGQ 422
                     EYVWAVYCNG K GYSIRRKQ S+DELHVMQ LRGVSMGAGVLP  SD  
Sbjct: 126 TKSNKKKLLEEYVWAVYCNGRKVGYSIRRKQMSDDELHVMQHLRGVSMGAGVLPTSSD-- 183

Query: 421 KESMDGELTYIRGRFERVVGSKDSEAFYMINPDRTS-GPELSIFFVR 284
            +  DGE+TY+R RFERVVGSKDSEAFYMINPD T+ GPELSIFFVR
Sbjct: 184 HKDCDGEMTYMRARFERVVGSKDSEAFYMINPDSTAQGPELSIFFVR 230


Top