BLASTX nr result

ID: Coptis24_contig00020635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020635
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266696.1| PREDICTED: uncharacterized protein LOC100244...    98   3e-18
emb|CAN64365.1| hypothetical protein VITISV_031302 [Vitis vinifera]    98   3e-18
ref|XP_002301221.1| predicted protein [Populus trichocarpa] gi|2...    87   5e-15
ref|XP_004154141.1| PREDICTED: uncharacterized protein LOC101206...    87   7e-15
gb|ADN34100.1| hypothetical protein [Cucumis melo subsp. melo]         86   1e-14

>ref|XP_002266696.1| PREDICTED: uncharacterized protein LOC100244411 [Vitis vinifera]
          Length = 303

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 57/105 (54%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
 Frame = -2

Query: 757 MRCNRHVSDLSSSVGVCATCLRERLFTLIAAQVXXXXXXXXXXXXXXXGXXXXXXXXXXP 578
           MRC +H +DLSS VGVCA+CLRERLF+LIAAQ                           P
Sbjct: 1   MRCKKHPTDLSSGVGVCASCLRERLFSLIAAQA--EAQARAQAQGRLAEDRRKSDTHPPP 58

Query: 577 LVFPRSVSPYICRR-SDDSSWHNQVHD----RRFYSTPQVGPTFS 458
           LVFPRSVSPY+CRR SDD +  +Q++D    RRFYSTPQVGPT+S
Sbjct: 59  LVFPRSVSPYVCRRKSDDVACGHQLYDTVSQRRFYSTPQVGPTYS 103



 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 48/109 (44%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
 Frame = -2

Query: 325 KKNSRFDQRANVFPR--CRRDRGMSPTNVEEQRDFETEDIETESGYSSVATA-------- 176
           KK SR     N   R  CR +RGMSP   E++ D + +   + SGYSS + A        
Sbjct: 164 KKQSRLCDETNAGGRRVCRMNRGMSPARREDEED-DYDLSPSASGYSSESQAWRRTPTAT 222

Query: 175 TPARRKGSVLHNRNVSGLAFCMSPLVRASPNNHRKDVNLPTS-GFSGEI 32
            PA R+      RNVSGLAFCMSPLVRASPN       +P   G  GEI
Sbjct: 223 APATRRARPTLGRNVSGLAFCMSPLVRASPNRQWNQKGMPPEIGLPGEI 271


>emb|CAN64365.1| hypothetical protein VITISV_031302 [Vitis vinifera]
          Length = 252

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 57/105 (54%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
 Frame = -2

Query: 757 MRCNRHVSDLSSSVGVCATCLRERLFTLIAAQVXXXXXXXXXXXXXXXGXXXXXXXXXXP 578
           MRC +H +DLSS VGVCA+CLRERLF+LIAAQ                           P
Sbjct: 1   MRCKKHPTDLSSGVGVCASCLRERLFSLIAAQA--EAQARAQAQGRLAEDRRKSDTHPPP 58

Query: 577 LVFPRSVSPYICRR-SDDSSWHNQVHD----RRFYSTPQVGPTFS 458
           LVFPRSVSPY+CRR SDD +  +Q++D    RRFYSTPQVGPT+S
Sbjct: 59  LVFPRSVSPYVCRRKSDDVACGHQLYDTVSQRRFYSTPQVGPTYS 103


>ref|XP_002301221.1| predicted protein [Populus trichocarpa] gi|222842947|gb|EEE80494.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 86/281 (30%), Positives = 109/281 (38%), Gaps = 39/281 (13%)
 Frame = -2

Query: 757 MRCNRHVSDLSSSVGVCATCLRERLFTLIAAQVXXXXXXXXXXXXXXXGXXXXXXXXXXP 578
           MRC +H  DLSS VGVCA+    +                                   P
Sbjct: 1   MRCKKHPGDLSSGVGVCASYESRK----------------------SDSNSQYLQQPPPP 38

Query: 577 LVFPRSVSPYICRRSDD--SSW--HNQVHDRRF---------YSTPQVGPT---FSKN-- 452
           L+FPRSVSPY+ RR  D  SSW  HN  H+ RF         Y+TP    T   + K   
Sbjct: 39  LIFPRSVSPYVARRKSDDSSSWSNHNHHHNLRFYSTPQLGPAYTTPSSTTTTAAYKKQSQ 98

Query: 451 ----YDNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKNSR-----FDQR 299
               + N                                      R+K SR     +   
Sbjct: 99  KFSLFSNLFRSRSDKFKTDSTGRRDSIEPPSSSSPSWFSMVFSGRRRKQSRQLPMEYSGT 158

Query: 298 ANVFPRCRRDRGMSPTN-VEEQRDFETED---------IETESGYSSVATATPARRKGSV 149
            +  PR R DRGMSP    +  +D E  D          E+  G+     A+   R+G  
Sbjct: 159 VSGEPRQRLDRGMSPARGADSDKDCENCDRSPSGSGCSSESSPGWKKTPVASGVMRRGKA 218

Query: 148 LHNRNVSGLAFCMSPLVRAS--PNNHRKDVNLPTSGFSGEI 32
            H RNVSGLAFC+SPLVRAS  PN ++K    P  G+SGE+
Sbjct: 219 GHPRNVSGLAFCLSPLVRASPKPNWNQKGGLPPELGYSGEV 259


>ref|XP_004154141.1| PREDICTED: uncharacterized protein LOC101206256 [Cucumis sativus]
           gi|449499030|ref|XP_004160701.1| PREDICTED:
           uncharacterized protein LOC101229830 [Cucumis sativus]
          Length = 335

 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 53/115 (46%), Positives = 64/115 (55%), Gaps = 16/115 (13%)
 Frame = -2

Query: 757 MRCNRHVSDLSSSVGVCATCLRERLFTLIAAQV------XXXXXXXXXXXXXXXGXXXXX 596
           MRC +H+SD++S+VGVCATCLRERL +L+AAQ                            
Sbjct: 1   MRCKKHLSDVTSAVGVCATCLRERLLSLMAAQARAEAHQLQLSRLRSSTAAAEDLPRKSD 60

Query: 595 XXXXXPLVFPRSVSPYICRRS-DDSSW---------HNQVHDRRFYSTPQVGPTF 461
                PLVFPRSVSPY+ RR  +DSSW         H + H  RFYSTPQVGPT+
Sbjct: 61  PLPPPPLVFPRSVSPYVSRRKVEDSSWSFQSPLDDRHRRFH-HRFYSTPQVGPTY 114



 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 47/124 (37%), Positives = 61/124 (49%), Gaps = 22/124 (17%)
 Frame = -2

Query: 325 KKNSRF-------DQRANVFPRCRRDRGMSPTNVEEQRDFETEDIE----TESGYSSVAT 179
           KK S+F       DQR    P     RGMSP     + D + +D      + SGYSS ++
Sbjct: 184 KKQSKFCSIEEQMDQRKKPPPSRFFSRGMSPAGGASEADGDCDDRRDGSPSASGYSSESS 243

Query: 178 A---TPARRKGSVLH------NRNVSGLAFCMSPLVRASPNN-HRKDVNLPTS-GFSGEI 32
               +PA   GS         +RNVS LAFC+SPLVRASPN+ H     LP    +SG++
Sbjct: 244 KWKPSPAASHGSTARRGRQGLSRNVSSLAFCLSPLVRASPNHRHWNQKGLPPEFVYSGDV 303

Query: 31  SRKN 20
              N
Sbjct: 304 RVPN 307


>gb|ADN34100.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 337

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 53/117 (45%), Positives = 64/117 (54%), Gaps = 18/117 (15%)
 Frame = -2

Query: 757 MRCNRHVSDLSSSVGVCATCLRERLFTLIAAQV--------XXXXXXXXXXXXXXXGXXX 602
           MRC +H+SD++S+VGVCATCLRERL +L+AAQ                            
Sbjct: 1   MRCKKHLSDVTSAVGVCATCLRERLLSLMAAQARAEAQQLQLSRLRSSTAAAGSEDLPRK 60

Query: 601 XXXXXXXPLVFPRSVSPYICRRS-DDSSW---------HNQVHDRRFYSTPQVGPTF 461
                  PLVFPRSVSPY+ RR  +DSSW         H + H  RFYSTPQVGPT+
Sbjct: 61  SDPLPPPPLVFPRSVSPYVSRRKVEDSSWSFQSPLDDRHRRFH-HRFYSTPQVGPTY 116


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