BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020630
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270825.1| PREDICTED: ribulose bisphosphate carboxylase...   320   1e-85
ref|XP_002299165.1| predicted protein [Populus trichocarpa] gi|2...   311   8e-83
emb|CBI25238.3| unnamed protein product [Vitis vinifera]              308   5e-82
ref|XP_002512778.1| Ribulose bisphosphate carboxylase/oxygenase ...   307   1e-81
ref|XP_004158798.1| PREDICTED: ribulose bisphosphate carboxylase...   305   8e-81

>ref|XP_002270825.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Vitis vinifera]
          Length = 442

 Score =  320 bits (821), Expect = 1e-85
 Identities = 167/236 (70%), Positives = 186/236 (78%), Gaps = 17/236 (7%)
 Frame = +3

Query: 57  MILHNTHNLILSPNNTHSF------ISPKI-----------IHTSFPSLCSKNTNKTPTC 185
           M L N HN +LS +++ S+      +SP +             TS  SL + N++     
Sbjct: 1   MALCNFHNTLLSSSSSSSYSSSFSPLSPFLKPPNALRFFTKFSTSPFSLRALNSSNNDNP 60

Query: 186 ASASASDEKRTKKISEQSSWEAKDAEGNDYLYRLGKEADNMNISVGAKPGVIDHLFVGNF 365
              SA  E   ++ISEQSSWEAKD+EG DYLYRLGKEADNMNI+VGA+ G+ID LFVGNF
Sbjct: 61  TGESAGGEAGQRRISEQSSWEAKDSEGRDYLYRLGKEADNMNIAVGARAGIIDDLFVGNF 120

Query: 366 LGRDADIVFDYRQKVTRSFEYLQGDYYIAPAFMDKVVCHIVKNYITHLLNVKVPLILGIW 545
           LGRD+DIVFDYRQKVTRSFEYLQGDYYIAP FMDKVVCHIVKNYI HLLN  VPLILGIW
Sbjct: 121 LGRDSDIVFDYRQKVTRSFEYLQGDYYIAPVFMDKVVCHIVKNYIAHLLNTNVPLILGIW 180

Query: 546 GGKGQGKSFQTELIFQAMGVEPVIMSAGELESDRAGEPGKLIRERYRTASQVVQNQ 713
           GGKGQGKSFQTELIFQAMG+EPVIMSAGELES+RAGEPGKLIRERYRTASQVVQNQ
Sbjct: 181 GGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQ 236


>ref|XP_002299165.1| predicted protein [Populus trichocarpa] gi|222846423|gb|EEE83970.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  311 bits (797), Expect = 8e-83
 Identities = 157/220 (71%), Positives = 182/220 (82%), Gaps = 3/220 (1%)
 Frame = +3

Query: 63  LHNTHNLILSPNNTHSFISPKIIHTSFPSLCSKNTNK---TPTCASASASDEKRTKKISE 233
           L  T N   SP      ISP +I  S    CSK+ ++   +P+    ++ +E+  +++S+
Sbjct: 11  LLQTQNFFTSPKK----ISPFLITVS----CSKSPSQPTSSPSPVDDNSENEEPKRRLSQ 62

Query: 234 QSSWEAKDAEGNDYLYRLGKEADNMNISVGAKPGVIDHLFVGNFLGRDADIVFDYRQKVT 413
           QSSWEAKD+EG DYLYRLGKEADNMNI+VGA+ GV+D LF GNFLG+D+DIVFDYRQKVT
Sbjct: 63  QSSWEAKDSEGKDYLYRLGKEADNMNIAVGARAGVVDSLFAGNFLGKDSDIVFDYRQKVT 122

Query: 414 RSFEYLQGDYYIAPAFMDKVVCHIVKNYITHLLNVKVPLILGIWGGKGQGKSFQTELIFQ 593
           RSFEYLQGDYYIAP F+DKVVCHIVKNY+ H LNVKVPLILGIWGGKGQGKSFQTELIFQ
Sbjct: 123 RSFEYLQGDYYIAPLFLDKVVCHIVKNYLAHRLNVKVPLILGIWGGKGQGKSFQTELIFQ 182

Query: 594 AMGVEPVIMSAGELESDRAGEPGKLIRERYRTASQVVQNQ 713
            +GVEPVIMSAGELES+RAGEPG+LIRERYRTASQVVQNQ
Sbjct: 183 TLGVEPVIMSAGELESERAGEPGRLIRERYRTASQVVQNQ 222


>emb|CBI25238.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score =  308 bits (790), Expect = 5e-82
 Identities = 163/236 (69%), Positives = 183/236 (77%), Gaps = 17/236 (7%)
 Frame = +3

Query: 57  MILHNTHNLILSPNNTHSF------ISPKI-----------IHTSFPSLCSKNTNKTPTC 185
           M L N HN +LS +++ S+      +SP +             TS  SL + N++     
Sbjct: 1   MALCNFHNTLLSSSSSSSYSSSFSPLSPFLKPPNALRFFTKFSTSPFSLRALNSSNNDNP 60

Query: 186 ASASASDEKRTKKISEQSSWEAKDAEGNDYLYRLGKEADNMNISVGAKPGVIDHLFVGNF 365
              SA  E   ++ISEQSSWEAKD+EG DYLYRLGKEADNMNI+VGA+ G+ID LFVGNF
Sbjct: 61  TGESAGGEAGQRRISEQSSWEAKDSEGRDYLYRLGKEADNMNIAVGARAGIIDDLFVGNF 120

Query: 366 LGRDADIVFDYRQKVTRSFEYLQGDYYIAPAFMDKVVCHIVKNYITHLLNVKVPLILGIW 545
           LGRD+DIVFDYRQKVTRSFEYLQGDYYIAP FM   +CHIVKNYI HLLN  VPLILGIW
Sbjct: 121 LGRDSDIVFDYRQKVTRSFEYLQGDYYIAPVFM--AMCHIVKNYIAHLLNTNVPLILGIW 178

Query: 546 GGKGQGKSFQTELIFQAMGVEPVIMSAGELESDRAGEPGKLIRERYRTASQVVQNQ 713
           GGKGQGKSFQTELIFQAMG+EPVIMSAGELES+RAGEPGKLIRERYRTASQVVQNQ
Sbjct: 179 GGKGQGKSFQTELIFQAMGIEPVIMSAGELESERAGEPGKLIRERYRTASQVVQNQ 234


>ref|XP_002512778.1| Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast
           precursor, putative [Ricinus communis]
           gi|223547789|gb|EEF49281.1| Ribulose bisphosphate
           carboxylase/oxygenase activase, chloroplast precursor,
           putative [Ricinus communis]
          Length = 428

 Score =  307 bits (787), Expect = 1e-81
 Identities = 154/202 (76%), Positives = 177/202 (87%), Gaps = 11/202 (5%)
 Frame = +3

Query: 141 FPSLCSKNTNKTPTCASASASD---------EKRTKK--ISEQSSWEAKDAEGNDYLYRL 287
           FPS+ S+    T +C+++S++D         +++T K  +SEQSSWE KD+EGNDYLYRL
Sbjct: 22  FPSIPSQQKIFTISCSNSSSNDGNNHTFSDEQQKTAKRQLSEQSSWETKDSEGNDYLYRL 81

Query: 288 GKEADNMNISVGAKPGVIDHLFVGNFLGRDADIVFDYRQKVTRSFEYLQGDYYIAPAFMD 467
           GKEADNMNI+VGA+PGVID LF GNFLGRD+DIVFDYRQKVTRSFEYL+GDYYIAP F+ 
Sbjct: 82  GKEADNMNIAVGARPGVIDPLFAGNFLGRDSDIVFDYRQKVTRSFEYLKGDYYIAPVFL- 140

Query: 468 KVVCHIVKNYITHLLNVKVPLILGIWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESDR 647
            ++CHIVKNYI HLLNVKVPLILGIWGGKGQGKSFQTEL+FQAMG+EPVIMSAGELES+R
Sbjct: 141 VMICHIVKNYIAHLLNVKVPLILGIWGGKGQGKSFQTELVFQAMGIEPVIMSAGELESER 200

Query: 648 AGEPGKLIRERYRTASQVVQNQ 713
           AGEPGKLIRERYRTASQVVQNQ
Sbjct: 201 AGEPGKLIRERYRTASQVVQNQ 222


>ref|XP_004158798.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Cucumis sativus]
          Length = 427

 Score =  305 bits (780), Expect = 8e-81
 Identities = 148/194 (76%), Positives = 169/194 (87%), Gaps = 3/194 (1%)
 Frame = +3

Query: 141 FPSLCSKNTNKTPTCASAS---ASDEKRTKKISEQSSWEAKDAEGNDYLYRLGKEADNMN 311
           FPS   +++N       +    +   KR K++SEQSSWEAKD+EG DYLYRLG EADNMN
Sbjct: 27  FPSFSVRSSNDVSGEVGSGGDGSESAKRPKRLSEQSSWEAKDSEGKDYLYRLGSEADNMN 86

Query: 312 ISVGAKPGVIDHLFVGNFLGRDADIVFDYRQKVTRSFEYLQGDYYIAPAFMDKVVCHIVK 491
           I+VGA+ GVID +F GNFLG+D+DIVFDYRQKVTR+FE++QGDYYIAP FMDKVVCH+VK
Sbjct: 87  IAVGARAGVIDDVFAGNFLGKDSDIVFDYRQKVTRTFEHIQGDYYIAPTFMDKVVCHLVK 146

Query: 492 NYITHLLNVKVPLILGIWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESDRAGEPGKLI 671
           N+I HLL+VKVPLILG+WGGKGQGKSFQTELIFQAMGVEPVIMSAGELES+RAGEPGKLI
Sbjct: 147 NFIVHLLDVKVPLILGVWGGKGQGKSFQTELIFQAMGVEPVIMSAGELESERAGEPGKLI 206

Query: 672 RERYRTASQVVQNQ 713
           RERYRTASQVVQNQ
Sbjct: 207 RERYRTASQVVQNQ 220