BLASTX nr result
ID: Coptis24_contig00020616
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020616 (329 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding... 157 8e-37 emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera] 157 8e-37 ref|XP_002468705.1| hypothetical protein SORBIDRAFT_01g050540 [S... 155 2e-36 ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223... 155 2e-36 emb|CBI16626.3| unnamed protein product [Vitis vinifera] 155 3e-36 >ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis vinifera] Length = 876 Score = 157 bits (397), Expect = 8e-37 Identities = 78/109 (71%), Positives = 91/109 (83%) Frame = -1 Query: 329 EMGLGKTLQAIAFLSYLKLDRMLPGPFLVLCPLSVIDGWVSEVAKFCPQLRLLRYIGDKQ 150 EMGLGKTLQAI+FLSY+K+ + PGPFLVLCPLSV DGWVSE+A F P+LR+LRY+GDK+ Sbjct: 63 EMGLGKTLQAISFLSYMKVHQKSPGPFLVLCPLSVTDGWVSEIANFAPKLRVLRYVGDKE 122 Query: 149 IRRGLRRMLFEHVKIHSSTSHEQSALPFDILLTTYDIVLMDQDFLSQIP 3 RR LRR ++E VK S S + SALPFD+LLTTYDI LMDQ FLSQIP Sbjct: 123 HRRSLRRTIYEQVKEQCSKS-DVSALPFDLLLTTYDIALMDQHFLSQIP 170 >emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera] Length = 1054 Score = 157 bits (397), Expect = 8e-37 Identities = 78/109 (71%), Positives = 91/109 (83%) Frame = -1 Query: 329 EMGLGKTLQAIAFLSYLKLDRMLPGPFLVLCPLSVIDGWVSEVAKFCPQLRLLRYIGDKQ 150 EMGLGKTLQAI+FLSY+K+ + PGPFLVLCPLSV DGWVSE+A F P+LR+LRY+GDK+ Sbjct: 71 EMGLGKTLQAISFLSYMKVHQKSPGPFLVLCPLSVTDGWVSEIANFAPKLRVLRYVGDKE 130 Query: 149 IRRGLRRMLFEHVKIHSSTSHEQSALPFDILLTTYDIVLMDQDFLSQIP 3 RR LRR ++E VK S S + SALPFD+LLTTYDI LMDQ FLSQIP Sbjct: 131 HRRSLRRTIYEQVKEQCSKS-DVSALPFDLLLTTYDIALMDQHFLSQIP 178 >ref|XP_002468705.1| hypothetical protein SORBIDRAFT_01g050540 [Sorghum bicolor] gi|241922559|gb|EER95703.1| hypothetical protein SORBIDRAFT_01g050540 [Sorghum bicolor] Length = 194 Score = 155 bits (393), Expect = 2e-36 Identities = 75/109 (68%), Positives = 90/109 (82%) Frame = -1 Query: 329 EMGLGKTLQAIAFLSYLKLDRMLPGPFLVLCPLSVIDGWVSEVAKFCPQLRLLRYIGDKQ 150 EMGLGKTLQAI+ LSYLK+ R+ PGPFLVLCPLSV DGW+SE +KFCP R+L+Y+GDK Sbjct: 66 EMGLGKTLQAISLLSYLKIQRIAPGPFLVLCPLSVTDGWLSEFSKFCPSFRVLQYVGDKL 125 Query: 149 IRRGLRRMLFEHVKIHSSTSHEQSALPFDILLTTYDIVLMDQDFLSQIP 3 RR LRR ++E V+ +STS + LPFD+L+TTYDI LMDQDFLSQIP Sbjct: 126 HRRDLRRTIYEDVQ-KASTSSRSNDLPFDVLMTTYDIALMDQDFLSQIP 173 >ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1| helicase, putative [Ricinus communis] Length = 860 Score = 155 bits (393), Expect = 2e-36 Identities = 76/109 (69%), Positives = 90/109 (82%) Frame = -1 Query: 329 EMGLGKTLQAIAFLSYLKLDRMLPGPFLVLCPLSVIDGWVSEVAKFCPQLRLLRYIGDKQ 150 EMGLGKTLQA+ FLSYLK ++ GPFLVLCPLSV DGW+SE+AKF P+L+ LRY+GDK Sbjct: 63 EMGLGKTLQAVCFLSYLKAQQISAGPFLVLCPLSVTDGWISEMAKFTPKLKALRYVGDKD 122 Query: 149 IRRGLRRMLFEHVKIHSSTSHEQSALPFDILLTTYDIVLMDQDFLSQIP 3 RR LRR +++HVK H S S + S LPFD+LLTTYDI LMDQ+FLSQIP Sbjct: 123 HRRNLRRNMYQHVKNHPS-STDGSLLPFDVLLTTYDIALMDQNFLSQIP 170 >emb|CBI16626.3| unnamed protein product [Vitis vinifera] Length = 832 Score = 155 bits (392), Expect = 3e-36 Identities = 77/108 (71%), Positives = 90/108 (83%) Frame = -1 Query: 326 MGLGKTLQAIAFLSYLKLDRMLPGPFLVLCPLSVIDGWVSEVAKFCPQLRLLRYIGDKQI 147 MGLGKTLQAI+FLSY+K+ + PGPFLVLCPLSV DGWVSE+A F P+LR+LRY+GDK+ Sbjct: 63 MGLGKTLQAISFLSYMKVHQKSPGPFLVLCPLSVTDGWVSEIANFAPKLRVLRYVGDKEH 122 Query: 146 RRGLRRMLFEHVKIHSSTSHEQSALPFDILLTTYDIVLMDQDFLSQIP 3 RR LRR ++E VK S S + SALPFD+LLTTYDI LMDQ FLSQIP Sbjct: 123 RRSLRRTIYEQVKEQCSKS-DVSALPFDLLLTTYDIALMDQHFLSQIP 169