BLASTX nr result

ID: Coptis24_contig00020602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020602
         (1648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554740.1| PREDICTED: uncharacterized protein LOC100778...   132   3e-28
ref|XP_003520857.1| PREDICTED: uncharacterized protein LOC100808...   129   2e-27
ref|XP_002274082.1| PREDICTED: uncharacterized protein LOC100261...   125   3e-26
ref|XP_002325911.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-26
emb|CAN80243.1| hypothetical protein VITISV_031021 [Vitis vinifera]   125   3e-26

>ref|XP_003554740.1| PREDICTED: uncharacterized protein LOC100778655 [Glycine max]
          Length = 599

 Score =  132 bits (332), Expect = 3e-28
 Identities = 63/166 (37%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
 Frame = +1

Query: 1150 QPMYVGMEWPTIKVARTYFKSLAVANKFSYKQVKNEKGRLRLKCAIEGCSWNIFASS--- 1320
            QP+ +G E+P ++  R   K +A+A  F  + VK+++ R   KC+ EGC W +  +    
Sbjct: 22   QPLVIGQEFPDVETCRRTMKDIAIAMHFDLRIVKSDRSRFIAKCSKEGCPWRVHVAKCPG 81

Query: 1321 VDQHTMRLRHFKGEHTCEADKNDKVKQAKSPWVAQIMEETLRDHPHFKPRDITAWIMRNY 1500
            V   T+R  H  GEHTCE  +N   +QA   WVA+ +E  +RD+P +KPR+I   I   +
Sbjct: 82   VPTFTVRTLH--GEHTCEGVQNLHHQQASVGWVARSVEARIRDNPQYKPREILQDIRDQH 139

Query: 1501 GVKISYFTAWGAKNKMQESIHGNYEDGYMLAPELMRQILTSNPGSL 1638
            G+ +SY  AW  K +   ++HG +E+GY L P    QI  +NPGS+
Sbjct: 140  GIAVSYMQAWRGKERSMAALHGTFEEGYRLLPAYCEQIRKTNPGSI 185


>ref|XP_003520857.1| PREDICTED: uncharacterized protein LOC100808214 [Glycine max]
          Length = 599

 Score =  129 bits (325), Expect = 2e-27
 Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 3/166 (1%)
 Frame = +1

Query: 1150 QPMYVGMEWPTIKVARTYFKSLAVANKFSYKQVKNEKGRLRLKCAIEGCSWNIFASS--- 1320
            QP+ +G E+  ++  R   K +A+A  F  + VK+++ R   KC+ EGC W +  +    
Sbjct: 22   QPLVIGQEFADVETCRRTLKDIAIAMHFDLRIVKSDRSRFIAKCSKEGCPWRVHVAKCPG 81

Query: 1321 VDQHTMRLRHFKGEHTCEADKNDKVKQAKSPWVAQIMEETLRDHPHFKPRDITAWIMRNY 1500
            V   T+R  H  GEHTCE  +N   +QA   WVA+ +E  +RD+P +KPR+I   I   +
Sbjct: 82   VPTFTVRTLH--GEHTCEGVQNLHHQQASVGWVARSVEARIRDNPQYKPREILQDIRDQH 139

Query: 1501 GVKISYFTAWGAKNKMQESIHGNYEDGYMLAPELMRQILTSNPGSL 1638
            GV +SY  AW  K +   ++HG +E+GY L P    QI  +NPGS+
Sbjct: 140  GVAVSYMQAWRGKERSMAALHGTFEEGYRLLPAYCEQIRKTNPGSI 185


>ref|XP_002274082.1| PREDICTED: uncharacterized protein LOC100261536 [Vitis vinifera]
          Length = 602

 Score =  125 bits (314), Expect = 3e-26
 Identities = 59/162 (36%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
 Frame = +1

Query: 1156 MYVGMEWPTIKVARTYFKSLAVANKFSYKQVKNEKGRLRLKCAIEGCSWNIF-ASSVDQH 1332
            + +G E+P ++  R   K +A+A  F  + VK+++ R   KC+ EGC W +  A      
Sbjct: 28   LVIGQEFPDVETCRRTLKDIAIALHFDLRIVKSDRSRFIAKCSKEGCPWRVHVAKCPGVP 87

Query: 1333 TMRLRHFKGEHTCEADKNDKVKQAKSPWVAQIMEETLRDHPHFKPRDITAWIMRNYGVKI 1512
            T  +R   G HTCE  +N   +QA   WVA+ +E+ +RD+P +KP++I   I   +GV +
Sbjct: 88   TFSIRTLHGVHTCEGVRNCHHQQASIGWVARSVEQRVRDNPQYKPKEILQDIRDQHGVAV 147

Query: 1513 SYFTAWGAKNKMQESIHGNYEDGYMLAPELMRQILTSNPGSL 1638
            SY  AW  K +   ++HG +E+GY L P    QI  +NPGS+
Sbjct: 148  SYMQAWRGKERSMAALHGTFEEGYRLLPGYCEQIRKTNPGSI 189


>ref|XP_002325911.1| predicted protein [Populus trichocarpa] gi|222862786|gb|EEF00293.1|
            predicted protein [Populus trichocarpa]
          Length = 594

 Score =  125 bits (314), Expect = 3e-26
 Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
 Frame = +1

Query: 1162 VGMEWPTIKVARTYFKSLAVANKFSYKQVKNEKGRLRLKCAIEGCSWNIF-ASSVDQHTM 1338
            +G E+P ++  R   K +A+A  F  + VK+++ R   KC+ EGC W +  A      T 
Sbjct: 22   IGQEFPNVETCRRTLKDIAIALHFDLRIVKSDRSRFIAKCSKEGCPWRVHVAKCPGVPTF 81

Query: 1339 RLRHFKGEHTCEADKNDKVKQAKSPWVAQIMEETLRDHPHFKPRDITAWIMRNYGVKISY 1518
             +R   GEHTCE  +N   +QA   WVA+ +E  +RD+P +KP++I   I   +GV +SY
Sbjct: 82   SIRTLHGEHTCEGVQNLHHQQASVGWVARSVEARIRDNPRYKPKEILEDIRDQHGVAVSY 141

Query: 1519 FTAWGAKNKMQESIHGNYEDGYMLAPELMRQILTSNPGSL 1638
              AW  K +   ++HG +E+G+ L P    QI  +NPGS+
Sbjct: 142  MQAWRGKERSMAALHGTFEEGFRLLPAYCEQIRKTNPGSI 181


>emb|CAN80243.1| hypothetical protein VITISV_031021 [Vitis vinifera]
          Length = 587

 Score =  125 bits (314), Expect = 3e-26
 Identities = 59/162 (36%), Positives = 92/162 (56%), Gaps = 1/162 (0%)
 Frame = +1

Query: 1156 MYVGMEWPTIKVARTYFKSLAVANKFSYKQVKNEKGRLRLKCAIEGCSWNIF-ASSVDQH 1332
            + +G E+P ++  R   K +A+A  F  + VK+++ R   KC+ EGC W +  A      
Sbjct: 13   LVIGQEFPDVETCRRTLKDIAIALHFDLRIVKSDRSRFIAKCSKEGCPWRVHVAKCPGVP 72

Query: 1333 TMRLRHFKGEHTCEADKNDKVKQAKSPWVAQIMEETLRDHPHFKPRDITAWIMRNYGVKI 1512
            T  +R   G HTCE  +N   +QA   WVA+ +E+ +RD+P +KP++I   I   +GV +
Sbjct: 73   TFSIRTLHGVHTCEGVRNCHHQQASIGWVARSVEQRVRDNPQYKPKEILQDIRDQHGVAV 132

Query: 1513 SYFTAWGAKNKMQESIHGNYEDGYMLAPELMRQILTSNPGSL 1638
            SY  AW  K +   ++HG +E+GY L P    QI  +NPGS+
Sbjct: 133  SYMQAWRGKERSMAALHGTFEEGYRLLPGYCEQIRKTNPGSI 174


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