BLASTX nr result
ID: Coptis24_contig00020588
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020588 (514 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004137847.1| PREDICTED: ras-related protein RABC2a-like [... 161 4e-38 gb|AFK40035.1| unknown [Medicago truncatula] 161 6e-38 ref|XP_002316401.1| predicted protein [Populus trichocarpa] gi|1... 161 6e-38 ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [... 160 1e-37 ref|XP_003535201.1| PREDICTED: ras-related protein RABC2a-like [... 160 1e-37 >ref|XP_004137847.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus] gi|449501036|ref|XP_004161260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABC2a-like [Cucumis sativus] Length = 210 Score = 161 bits (408), Expect = 4e-38 Identities = 83/97 (85%), Positives = 88/97 (90%) Frame = +1 Query: 223 SGHGNNYDYSFKILLIGDSSVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGEKKLK 402 SG +NYD SFK+LLIGDS VGKSSLLLSFIS + D NL+PTIGVDFKIKLL VG K+LK Sbjct: 5 SGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNAD-NLAPTIGVDFKIKLLKVGGKRLK 63 Query: 403 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET 513 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET Sbjct: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET 100 >gb|AFK40035.1| unknown [Medicago truncatula] Length = 214 Score = 161 bits (407), Expect = 6e-38 Identities = 81/98 (82%), Positives = 89/98 (90%) Frame = +1 Query: 220 GSGHGNNYDYSFKILLIGDSSVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGEKKL 399 GSG + +D SFKILLIGDS VGKS LL++FISNS ++LSPTIGVDFKIK+LTVG K+L Sbjct: 6 GSGQSSGHDLSFKILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGGKRL 65 Query: 400 KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET 513 KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET Sbjct: 66 KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET 103 >ref|XP_002316401.1| predicted protein [Populus trichocarpa] gi|118482557|gb|ABK93199.1| unknown [Populus trichocarpa] gi|222865441|gb|EEF02572.1| predicted protein [Populus trichocarpa] Length = 212 Score = 161 bits (407), Expect = 6e-38 Identities = 84/96 (87%), Positives = 88/96 (91%) Frame = +1 Query: 226 GHGNNYDYSFKILLIGDSSVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGEKKLKL 405 G N+YDYSFKILLIGDS VGKSSLLLSFISNSV D LSPTIGVDFKIK+LT+G K+LKL Sbjct: 8 GWNNSYDYSFKILLIGDSGVGKSSLLLSFISNSVRD-LSPTIGVDFKIKVLTLGGKRLKL 66 Query: 406 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET 513 TIWDTAGQERF TLTSSYYRGA GIILVYDVTRRET Sbjct: 67 TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRET 102 >ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [Glycine max] Length = 211 Score = 160 bits (405), Expect = 1e-37 Identities = 81/97 (83%), Positives = 90/97 (92%) Frame = +1 Query: 223 SGHGNNYDYSFKILLIGDSSVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGEKKLK 402 SG + YD SFKILLIGDS+VGKSSLL+SFISNS +D ++PTIGVDFKIK+LTVG K+LK Sbjct: 5 SGQSSGYDLSFKILLIGDSAVGKSSLLVSFISNSAED-IAPTIGVDFKIKMLTVGGKRLK 63 Query: 403 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET 513 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRR+T Sbjct: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRDT 100 >ref|XP_003535201.1| PREDICTED: ras-related protein RABC2a-like [Glycine max] Length = 212 Score = 160 bits (405), Expect = 1e-37 Identities = 81/97 (83%), Positives = 90/97 (92%) Frame = +1 Query: 223 SGHGNNYDYSFKILLIGDSSVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGEKKLK 402 SG + YD SFKILLIGDS+VGKSSLL+SFISNS +D ++PTIGVDFKIK+LTVG K+LK Sbjct: 5 SGQSSGYDLSFKILLIGDSAVGKSSLLVSFISNSAED-IAPTIGVDFKIKMLTVGGKRLK 63 Query: 403 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET 513 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRR+T Sbjct: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRDT 100