BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020588
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137847.1| PREDICTED: ras-related protein RABC2a-like [...   161   4e-38
gb|AFK40035.1| unknown [Medicago truncatula]                          161   6e-38
ref|XP_002316401.1| predicted protein [Populus trichocarpa] gi|1...   161   6e-38
ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [...   160   1e-37
ref|XP_003535201.1| PREDICTED: ras-related protein RABC2a-like [...   160   1e-37

>ref|XP_004137847.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
           gi|449501036|ref|XP_004161260.1| PREDICTED: LOW QUALITY
           PROTEIN: ras-related protein RABC2a-like [Cucumis
           sativus]
          Length = 210

 Score =  161 bits (408), Expect = 4e-38
 Identities = 83/97 (85%), Positives = 88/97 (90%)
 Frame = +1

Query: 223 SGHGNNYDYSFKILLIGDSSVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGEKKLK 402
           SG  +NYD SFK+LLIGDS VGKSSLLLSFIS + D NL+PTIGVDFKIKLL VG K+LK
Sbjct: 5   SGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNAD-NLAPTIGVDFKIKLLKVGGKRLK 63

Query: 403 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET 513
           LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET
Sbjct: 64  LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET 100


>gb|AFK40035.1| unknown [Medicago truncatula]
          Length = 214

 Score =  161 bits (407), Expect = 6e-38
 Identities = 81/98 (82%), Positives = 89/98 (90%)
 Frame = +1

Query: 220 GSGHGNNYDYSFKILLIGDSSVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGEKKL 399
           GSG  + +D SFKILLIGDS VGKS LL++FISNS  ++LSPTIGVDFKIK+LTVG K+L
Sbjct: 6   GSGQSSGHDLSFKILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGGKRL 65

Query: 400 KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET 513
           KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET
Sbjct: 66  KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET 103


>ref|XP_002316401.1| predicted protein [Populus trichocarpa] gi|118482557|gb|ABK93199.1|
           unknown [Populus trichocarpa]
           gi|222865441|gb|EEF02572.1| predicted protein [Populus
           trichocarpa]
          Length = 212

 Score =  161 bits (407), Expect = 6e-38
 Identities = 84/96 (87%), Positives = 88/96 (91%)
 Frame = +1

Query: 226 GHGNNYDYSFKILLIGDSSVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGEKKLKL 405
           G  N+YDYSFKILLIGDS VGKSSLLLSFISNSV D LSPTIGVDFKIK+LT+G K+LKL
Sbjct: 8   GWNNSYDYSFKILLIGDSGVGKSSLLLSFISNSVRD-LSPTIGVDFKIKVLTLGGKRLKL 66

Query: 406 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET 513
           TIWDTAGQERF TLTSSYYRGA GIILVYDVTRRET
Sbjct: 67  TIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRET 102


>ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
          Length = 211

 Score =  160 bits (405), Expect = 1e-37
 Identities = 81/97 (83%), Positives = 90/97 (92%)
 Frame = +1

Query: 223 SGHGNNYDYSFKILLIGDSSVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGEKKLK 402
           SG  + YD SFKILLIGDS+VGKSSLL+SFISNS +D ++PTIGVDFKIK+LTVG K+LK
Sbjct: 5   SGQSSGYDLSFKILLIGDSAVGKSSLLVSFISNSAED-IAPTIGVDFKIKMLTVGGKRLK 63

Query: 403 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET 513
           LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRR+T
Sbjct: 64  LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRDT 100


>ref|XP_003535201.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
          Length = 212

 Score =  160 bits (405), Expect = 1e-37
 Identities = 81/97 (83%), Positives = 90/97 (92%)
 Frame = +1

Query: 223 SGHGNNYDYSFKILLIGDSSVGKSSLLLSFISNSVDDNLSPTIGVDFKIKLLTVGEKKLK 402
           SG  + YD SFKILLIGDS+VGKSSLL+SFISNS +D ++PTIGVDFKIK+LTVG K+LK
Sbjct: 5   SGQSSGYDLSFKILLIGDSAVGKSSLLVSFISNSAED-IAPTIGVDFKIKMLTVGGKRLK 63

Query: 403 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRET 513
           LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRR+T
Sbjct: 64  LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRDT 100