BLASTX nr result

ID: Coptis24_contig00020586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020586
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268027.1| PREDICTED: uncharacterized protein LOC100260...    62   4e-08
ref|NP_563872.1| uncharacterized protein [Arabidopsis thaliana] ...    60   2e-07
ref|NP_001237024.1| uncharacterized protein LOC100306067 precurs...    59   3e-07
ref|XP_004135224.1| PREDICTED: uncharacterized protein LOC101210...    59   4e-07
ref|XP_002534527.1| conserved hypothetical protein [Ricinus comm...    59   4e-07

>ref|XP_002268027.1| PREDICTED: uncharacterized protein LOC100260319 [Vitis vinifera]
           gi|296086507|emb|CBI32096.3| unnamed protein product
           [Vitis vinifera]
          Length = 192

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/59 (57%), Positives = 43/59 (72%)
 Frame = -1

Query: 179 KQQPLLFSPCLLFSTSLRMSKHHLCRAEAEYQFPDPIPDFAEAETDKFKNHLLEKLPKK 3
           K QP L S  L+FS+S     +H+CRA AEY+FPDPIP+FA+ ET+KF+ HLL K  KK
Sbjct: 60  KLQPQLHS--LVFSSS--SFANHICRA-AEYKFPDPIPEFAQVETEKFRTHLLNKFSKK 113


>ref|NP_563872.1| uncharacterized protein [Arabidopsis thaliana]
           gi|145323826|ref|NP_001077502.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|5091545|gb|AAD39574.1|AC007067_14 T10O24.14
           [Arabidopsis thaliana] gi|21554792|gb|AAM63692.1|
           unknown [Arabidopsis thaliana]
           gi|149944329|gb|ABR46207.1| At1g10522 [Arabidopsis
           thaliana] gi|332190468|gb|AEE28589.1| uncharacterized
           protein [Arabidopsis thaliana]
           gi|332190469|gb|AEE28590.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 179

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/47 (59%), Positives = 37/47 (78%)
 Frame = -1

Query: 143 FSTSLRMSKHHLCRAEAEYQFPDPIPDFAEAETDKFKNHLLEKLPKK 3
           FS S    +  +CRA AEY+FPDPIP+FAEAET+KF++H+L KL K+
Sbjct: 56  FSLSSLSRRGFVCRA-AEYKFPDPIPEFAEAETEKFRDHMLNKLSKR 101


>ref|NP_001237024.1| uncharacterized protein LOC100306067 precursor [Glycine max]
           gi|255627431|gb|ACU14060.1| unknown [Glycine max]
          Length = 173

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%)
 Frame = -1

Query: 143 FSTSLRMSKHHLCRAEAEYQFPDPIPDFAEAETDKFKNHLLEKLPKK 3
           FST    S   L    AEY+FPDPIP+FA+AET KFK+HLL+KL KK
Sbjct: 45  FSTLPFSSTKRLVTRAAEYKFPDPIPEFADAETQKFKSHLLKKLSKK 91


>ref|XP_004135224.1| PREDICTED: uncharacterized protein LOC101210245 [Cucumis sativus]
           gi|449527396|ref|XP_004170697.1| PREDICTED:
           uncharacterized LOC101210245 [Cucumis sativus]
          Length = 169

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = -1

Query: 170 PLLFSPCLLFSTSLRMSKHHLCRAEAEYQFPDPIPDFAEAETDKFKNHLLEKLPKK 3
           PL  SP L   +S   +  H+C A AEY+FPDPIP+FA AET+KF+ HLL+KL K+
Sbjct: 37  PLRLSPTLTLPSSSFPT--HICTA-AEYKFPDPIPEFAVAETEKFRAHLLQKLSKR 89


>ref|XP_002534527.1| conserved hypothetical protein [Ricinus communis]
           gi|223525108|gb|EEF27857.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 188

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 17/73 (23%)
 Frame = -1

Query: 170 PLLFSPCLLFS----TSLRMSKHHL-------------CRAEAEYQFPDPIPDFAEAETD 42
           P  F+P +L S    T++R+++ HL             CRA AEY+FPDPIP+FA+ ET+
Sbjct: 37  PSTFTPLVLGSSSHLTNIRLARFHLFPYVTKNKGNNHICRA-AEYKFPDPIPEFADVETE 95

Query: 41  KFKNHLLEKLPKK 3
           KF+ HL +KL KK
Sbjct: 96  KFRTHLQKKLSKK 108


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