BLASTX nr result

ID: Coptis24_contig00020585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020585
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2...   246   1e-63
ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2...   246   1e-63
ref|XP_002317351.1| multidrug resistance protein ABC transporter...   244   7e-63
ref|XP_002526610.1| mgatp-energized glutathione s-conjugate pump...   242   3e-62
ref|XP_002281070.1| PREDICTED: ABC transporter C family member 2...   240   1e-61

>ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2 isoform 2 [Vitis
           vinifera]
          Length = 1616

 Score =  246 bits (628), Expect = 1e-63
 Identities = 111/149 (74%), Positives = 126/149 (84%)
 Frame = -2

Query: 447 RFTLYLYVSEVFCQVLFGIFLLFYVPSVEPYLGYTPLRDESIDNAEYEVLPGGEQICPER 268
           R  LYLY+SEV  QVLFGI LLFYVP ++PY GYTP+   S+D+AEYE +PGGEQICPER
Sbjct: 164 RSILYLYISEVVLQVLFGILLLFYVPDLDPYPGYTPMWTGSVDDAEYEEIPGGEQICPER 223

Query: 267 HANILSWIYFGWMTPLMQQGYKRPITEKDVWKLDTWDQTETLNNKFQRCWIDESRKQKPW 88
           H NI S I FGWM P+MQ G KRPITEKDVWKLD+WDQTETLNN FQRCW +E+ + KPW
Sbjct: 224 HVNIFSRITFGWMNPIMQLGSKRPITEKDVWKLDSWDQTETLNNNFQRCWAEEALRPKPW 283

Query: 87  LLRALHRSVGGRFWWGGVFKIGNDLSQFV 1
           LLRAL+RS+GGRFWWGG +KIGNDLSQFV
Sbjct: 284 LLRALNRSLGGRFWWGGFWKIGNDLSQFV 312


>ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2 isoform 1 [Vitis
           vinifera] gi|297740795|emb|CBI30977.3| unnamed protein
           product [Vitis vinifera]
          Length = 1623

 Score =  246 bits (628), Expect = 1e-63
 Identities = 111/149 (74%), Positives = 126/149 (84%)
 Frame = -2

Query: 447 RFTLYLYVSEVFCQVLFGIFLLFYVPSVEPYLGYTPLRDESIDNAEYEVLPGGEQICPER 268
           R  LYLY+SEV  QVLFGI LLFYVP ++PY GYTP+   S+D+AEYE +PGGEQICPER
Sbjct: 171 RSILYLYISEVVLQVLFGILLLFYVPDLDPYPGYTPMWTGSVDDAEYEEIPGGEQICPER 230

Query: 267 HANILSWIYFGWMTPLMQQGYKRPITEKDVWKLDTWDQTETLNNKFQRCWIDESRKQKPW 88
           H NI S I FGWM P+MQ G KRPITEKDVWKLD+WDQTETLNN FQRCW +E+ + KPW
Sbjct: 231 HVNIFSRITFGWMNPIMQLGSKRPITEKDVWKLDSWDQTETLNNNFQRCWAEEALRPKPW 290

Query: 87  LLRALHRSVGGRFWWGGVFKIGNDLSQFV 1
           LLRAL+RS+GGRFWWGG +KIGNDLSQFV
Sbjct: 291 LLRALNRSLGGRFWWGGFWKIGNDLSQFV 319


>ref|XP_002317351.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222860416|gb|EEE97963.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1617

 Score =  244 bits (622), Expect = 7e-63
 Identities = 108/146 (73%), Positives = 127/146 (86%)
 Frame = -2

Query: 438 LYLYVSEVFCQVLFGIFLLFYVPSVEPYLGYTPLRDESIDNAEYEVLPGGEQICPERHAN 259
           L+LY+SEV  Q LFGI LL YVP ++PY GYTP++ ES+D+AEYE LPGGE ICPERHAN
Sbjct: 167 LHLYISEVIVQGLFGILLLVYVPDLDPYPGYTPMQIESVDDAEYEELPGGEYICPERHAN 226

Query: 258 ILSWIYFGWMTPLMQQGYKRPITEKDVWKLDTWDQTETLNNKFQRCWIDESRKQKPWLLR 79
           I+S I FGWM+PLM+ GY+RPITEKDVWKLDTWD+TETLN++FQ+CW +E RK KPWLLR
Sbjct: 227 IISKIVFGWMSPLMKLGYRRPITEKDVWKLDTWDRTETLNDRFQKCWAEELRKPKPWLLR 286

Query: 78  ALHRSVGGRFWWGGVFKIGNDLSQFV 1
           ALH S+GGRFWWGG +KIGND SQFV
Sbjct: 287 ALHSSLGGRFWWGGFWKIGNDASQFV 312


>ref|XP_002526610.1| mgatp-energized glutathione s-conjugate pump, putative [Ricinus
           communis] gi|223534050|gb|EEF35769.1| mgatp-energized
           glutathione s-conjugate pump, putative [Ricinus
           communis]
          Length = 1626

 Score =  242 bits (617), Expect = 3e-62
 Identities = 112/149 (75%), Positives = 125/149 (83%)
 Frame = -2

Query: 447 RFTLYLYVSEVFCQVLFGIFLLFYVPSVEPYLGYTPLRDESIDNAEYEVLPGGEQICPER 268
           RFTLY Y+S V CQVLFG+ LL YVP+++PY GY+ L+ ES +N EYE LPGGE  CPER
Sbjct: 171 RFTLYTYISAVVCQVLFGLLLLVYVPNLDPYPGYSILQPESPENGEYEALPGGEH-CPER 229

Query: 267 HANILSWIYFGWMTPLMQQGYKRPITEKDVWKLDTWDQTETLNNKFQRCWIDESRKQKPW 88
           H N+ S IYFGWMTPLMQQGYK+PITEKDVWKLDTWDQTETL  KFQRCWI ES+K KPW
Sbjct: 230 HVNLFSRIYFGWMTPLMQQGYKKPITEKDVWKLDTWDQTETLIKKFQRCWIKESQKPKPW 289

Query: 87  LLRALHRSVGGRFWWGGVFKIGNDLSQFV 1
           LLRAL+ S+G RFW GG FKIGNDLSQFV
Sbjct: 290 LLRALNNSLGRRFWLGGFFKIGNDLSQFV 318


>ref|XP_002281070.1| PREDICTED: ABC transporter C family member 2-like [Vitis vinifera]
          Length = 1624

 Score =  240 bits (612), Expect = 1e-61
 Identities = 106/149 (71%), Positives = 130/149 (87%)
 Frame = -2

Query: 447 RFTLYLYVSEVFCQVLFGIFLLFYVPSVEPYLGYTPLRDESIDNAEYEVLPGGEQICPER 268
           R  LY  +S V CQVLFGI LL +VP++ PY+GYTP++ +S++N +YEVLPGG+QICPE+
Sbjct: 171 RSVLYPPISSVLCQVLFGICLLVHVPNLNPYVGYTPMQSDSLENTKYEVLPGGDQICPEK 230

Query: 267 HANILSWIYFGWMTPLMQQGYKRPITEKDVWKLDTWDQTETLNNKFQRCWIDESRKQKPW 88
           HAN+ S IYFGWMTPLMQQGYK+PITEKD+WKLDTWDQTETL+ +FQ+CWI+ES++ KP 
Sbjct: 231 HANMFSRIYFGWMTPLMQQGYKKPITEKDIWKLDTWDQTETLSRRFQKCWIEESQRSKPR 290

Query: 87  LLRALHRSVGGRFWWGGVFKIGNDLSQFV 1
           LLRAL+ S+GGRFW GG FKIGNDLSQFV
Sbjct: 291 LLRALNCSLGGRFWRGGFFKIGNDLSQFV 319


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