BLASTX nr result

ID: Coptis24_contig00020581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020581
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171163.1| PREDICTED: RRP12-like protein-like, partial ...    76   3e-12
ref|XP_004136785.1| PREDICTED: RRP12-like protein-like [Cucumis ...    76   3e-12
ref|XP_002278438.2| PREDICTED: RRP12-like protein-like [Vitis vi...    71   8e-11
emb|CBI29830.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002308940.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11

>ref|XP_004171163.1| PREDICTED: RRP12-like protein-like, partial [Cucumis sativus]
          Length = 426

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/64 (59%), Positives = 46/64 (71%)
 Frame = +2

Query: 290 EETALEENKDICQTLMERYNKSSASQHIHLCASAAAMKTILQEENLPFTPLSYFAATISS 469
           E   L +  DIC  LMERY KSSA QH HL ASA AM++IL  E+LP TP +YFAA IS+
Sbjct: 20  EAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSILHSESLPLTPAAYFAAAISA 79

Query: 470 INDA 481
           I++A
Sbjct: 80  IDNA 83


>ref|XP_004136785.1| PREDICTED: RRP12-like protein-like [Cucumis sativus]
          Length = 1149

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/64 (59%), Positives = 46/64 (71%)
 Frame = +2

Query: 290 EETALEENKDICQTLMERYNKSSASQHIHLCASAAAMKTILQEENLPFTPLSYFAATISS 469
           E   L +  DIC  LMERY KSSA QH HL ASA AM++IL  E+LP TP +YFAA IS+
Sbjct: 20  EAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSILHSESLPLTPAAYFAAAISA 79

Query: 470 INDA 481
           I++A
Sbjct: 80  IDNA 83


>ref|XP_002278438.2| PREDICTED: RRP12-like protein-like [Vitis vinifera]
          Length = 1128

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/62 (54%), Positives = 44/62 (70%)
 Frame = +2

Query: 287 IEETALEENKDICQTLMERYNKSSASQHIHLCASAAAMKTILQEENLPFTPLSYFAATIS 466
           + +    E  DICQ LM RY KSSA QH HL A+AAA+++I+  E LP TPLSYFAA ++
Sbjct: 12  LADAIFTEKSDICQGLMNRYAKSSAPQHRHLIATAAAVRSIITAEALPLTPLSYFAAVVT 71

Query: 467 SI 472
           +I
Sbjct: 72  TI 73


>emb|CBI29830.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/62 (54%), Positives = 44/62 (70%)
 Frame = +2

Query: 287 IEETALEENKDICQTLMERYNKSSASQHIHLCASAAAMKTILQEENLPFTPLSYFAATIS 466
           + +    E  DICQ LM RY KSSA QH HL A+AAA+++I+  E LP TPLSYFAA ++
Sbjct: 12  LADAIFTEKSDICQGLMNRYAKSSAPQHRHLIATAAAVRSIITAEALPLTPLSYFAAVVT 71

Query: 467 SI 472
           +I
Sbjct: 72  TI 73


>ref|XP_002308940.1| predicted protein [Populus trichocarpa] gi|222854916|gb|EEE92463.1|
           predicted protein [Populus trichocarpa]
          Length = 1177

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/63 (50%), Positives = 49/63 (77%)
 Frame = +2

Query: 293 ETALEENKDICQTLMERYNKSSASQHIHLCASAAAMKTILQEENLPFTPLSYFAATISSI 472
           ET L+ + +ICQ L+ RY+ S+A QH HL A+AAA+++IL  E+LP TP +YFAA I+++
Sbjct: 11  ETQLKNDTEICQQLLSRYSASTAPQHRHLLATAAALRSILTAESLPLTPSAYFAAAINNL 70

Query: 473 NDA 481
           +D+
Sbjct: 71  SDS 73


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