BLASTX nr result
ID: Coptis24_contig00020581
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020581 (506 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004171163.1| PREDICTED: RRP12-like protein-like, partial ... 76 3e-12 ref|XP_004136785.1| PREDICTED: RRP12-like protein-like [Cucumis ... 76 3e-12 ref|XP_002278438.2| PREDICTED: RRP12-like protein-like [Vitis vi... 71 8e-11 emb|CBI29830.3| unnamed protein product [Vitis vinifera] 71 8e-11 ref|XP_002308940.1| predicted protein [Populus trichocarpa] gi|2... 71 8e-11 >ref|XP_004171163.1| PREDICTED: RRP12-like protein-like, partial [Cucumis sativus] Length = 426 Score = 75.9 bits (185), Expect = 3e-12 Identities = 38/64 (59%), Positives = 46/64 (71%) Frame = +2 Query: 290 EETALEENKDICQTLMERYNKSSASQHIHLCASAAAMKTILQEENLPFTPLSYFAATISS 469 E L + DIC LMERY KSSA QH HL ASA AM++IL E+LP TP +YFAA IS+ Sbjct: 20 EAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSILHSESLPLTPAAYFAAAISA 79 Query: 470 INDA 481 I++A Sbjct: 80 IDNA 83 >ref|XP_004136785.1| PREDICTED: RRP12-like protein-like [Cucumis sativus] Length = 1149 Score = 75.9 bits (185), Expect = 3e-12 Identities = 38/64 (59%), Positives = 46/64 (71%) Frame = +2 Query: 290 EETALEENKDICQTLMERYNKSSASQHIHLCASAAAMKTILQEENLPFTPLSYFAATISS 469 E L + DIC LMERY KSSA QH HL ASA AM++IL E+LP TP +YFAA IS+ Sbjct: 20 EAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSILHSESLPLTPAAYFAAAISA 79 Query: 470 INDA 481 I++A Sbjct: 80 IDNA 83 >ref|XP_002278438.2| PREDICTED: RRP12-like protein-like [Vitis vinifera] Length = 1128 Score = 71.2 bits (173), Expect = 8e-11 Identities = 34/62 (54%), Positives = 44/62 (70%) Frame = +2 Query: 287 IEETALEENKDICQTLMERYNKSSASQHIHLCASAAAMKTILQEENLPFTPLSYFAATIS 466 + + E DICQ LM RY KSSA QH HL A+AAA+++I+ E LP TPLSYFAA ++ Sbjct: 12 LADAIFTEKSDICQGLMNRYAKSSAPQHRHLIATAAAVRSIITAEALPLTPLSYFAAVVT 71 Query: 467 SI 472 +I Sbjct: 72 TI 73 >emb|CBI29830.3| unnamed protein product [Vitis vinifera] Length = 1112 Score = 71.2 bits (173), Expect = 8e-11 Identities = 34/62 (54%), Positives = 44/62 (70%) Frame = +2 Query: 287 IEETALEENKDICQTLMERYNKSSASQHIHLCASAAAMKTILQEENLPFTPLSYFAATIS 466 + + E DICQ LM RY KSSA QH HL A+AAA+++I+ E LP TPLSYFAA ++ Sbjct: 12 LADAIFTEKSDICQGLMNRYAKSSAPQHRHLIATAAAVRSIITAEALPLTPLSYFAAVVT 71 Query: 467 SI 472 +I Sbjct: 72 TI 73 >ref|XP_002308940.1| predicted protein [Populus trichocarpa] gi|222854916|gb|EEE92463.1| predicted protein [Populus trichocarpa] Length = 1177 Score = 71.2 bits (173), Expect = 8e-11 Identities = 32/63 (50%), Positives = 49/63 (77%) Frame = +2 Query: 293 ETALEENKDICQTLMERYNKSSASQHIHLCASAAAMKTILQEENLPFTPLSYFAATISSI 472 ET L+ + +ICQ L+ RY+ S+A QH HL A+AAA+++IL E+LP TP +YFAA I+++ Sbjct: 11 ETQLKNDTEICQQLLSRYSASTAPQHRHLLATAAALRSILTAESLPLTPSAYFAAAINNL 70 Query: 473 NDA 481 +D+ Sbjct: 71 SDS 73